RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 ARHGEF3Q9NR81 526 aa5.77□□□□□ -1.49
COPS3-208ENST00000486032 SLC2A4RGQ9NR83 387 aa5.77□□□□□ -1.49
COPS3-208ENST00000486032 RAB6BQ9NRW1 208 aa5.77□□□□□ -1.49
COPS3-208ENST00000486032 RBM12Q9NTZ6 932 aaKnown RBP5.77□□□□□ -1.49
COPS3-208ENST00000486032 ABCB8Q9NUT2 735 aa5.77□□□□□ -1.49
COPS3-208ENST00000486032 ETNK2Q9NVF9 386 aa5.77□□□□□ -1.49
COPS3-208ENST00000486032 KIAA1522Q9P206 1035 aaPredicted RBP5.77□□□□□ -1.49
COPS3-208ENST00000486032 PPARGC1AQ9UBK2 798 aaKnown RBP5.77□□□□□ -1.49
COPS3-208ENST00000486032 GGA2Q9UJY4 613 aa5.77□□□□□ -1.49
COPS3-208ENST00000486032 VPS28Q9UK41 221 aa5.77□□□□□ -1.49
COPS3-208ENST00000486032 HEY1Q9Y5J3 304 aa5.77□□□□□ -1.49
COPS3-208ENST00000486032 MIA3Q5JRA6 1907 aa5.77□□□□□ -1.49
COPS3-208ENST00000486032 NCOR1O75376 2440 aa5.77□□□□□ -1.49
COPS3-208ENST00000486032 WDFY4Q6ZS81 3184 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 hCG_1818297A0A087WSY0 165 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 A0A0D9SEW6 157 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 DCDC2BA2VCK2 349 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 CTAGE9A4FU28 777 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 DRGXA6NNA5 263 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.76□□□□□ -1.49
COPS3-208ENST00000486032 RASA4BC9J798 803 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 CBX4O00257 560 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 GFRA2O00451 464 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 DCLK1O15075 740 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 FGF10O15520 208 aaPredicted RBP5.76□□□□□ -1.49
COPS3-208ENST00000486032 RASA4O43374 803 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 DCXO43602 365 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 MFSD11O43934 449 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 CACNG3O60359 315 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 SNAP91O60641 907 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 CST8O60676 142 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 RAMP2O60895 175 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 KAT7O95251 611 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 EGFP01133 1207 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 PENKP01210 267 aaPredicted RBP5.76□□□□□ -1.49
COPS3-208ENST00000486032 CISD3P0C7P0 127 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 POLR2EP19388 210 aaKnown RBP5.76□□□□□ -1.49
COPS3-208ENST00000486032 GLDCP23378 1020 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 IL4RP24394 825 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 HLA-FP30511 346 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 WASP42768 502 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 MAPKAPK2P49137 400 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 PEX5P50542 639 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 PAPOLAP51003 745 aaKnown RBP5.76□□□□□ -1.49
COPS3-208ENST00000486032 ZXDAP98168 799 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 MESP2Q0VG99 397 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 GRSF1Q12849 480 aaKnown RBP eCLIP5.76□□□□□ -1.49
COPS3-208ENST00000486032 SEMA3BQ13214 749 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 DPYSQ14117 519 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 POLD3Q15054 466 aaPredicted RBP5.76□□□□□ -1.49
COPS3-208ENST00000486032 GEN1Q17RS7 908 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 LONRF2Q1L5Z9 754 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 GAB4Q2WGN9 574 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 FUT11Q495W5 492 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 C2orf27AQ580R0 203 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 TFDP3Q5H9I0 405 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 DNTTIP2Q5QJE6 756 aaKnown RBP5.76□□□□□ -1.49
COPS3-208ENST00000486032 FAM182AQ5T1J6 154 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 ACBD5Q5T8D3 534 aaPredicted RBP5.76□□□□□ -1.49
COPS3-208ENST00000486032 EMC10Q5UCC4 262 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 MANEALQ5VSG8 457 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 TTC39BQ5VTQ0 682 aaPredicted RBP5.76□□□□□ -1.49
COPS3-208ENST00000486032 DCAF12L1Q5VU92 463 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 MBLAC2Q68D91 279 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 NCBP2-AS2Q69YL0 99 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 CWF19L1Q69YN2 538 aaKnown RBP5.76□□□□□ -1.49
COPS3-208ENST00000486032 CXorf57Q6NSI4 855 aaKnown RBP5.76□□□□□ -1.49
COPS3-208ENST00000486032 LINGO4Q6UY18 593 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 ZNF852Q6ZMS4 543 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 ZSCAN30Q86W11 494 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 NLRP14Q86W24 1093 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 RALGPS2Q86X27 583 aaPredicted RBP5.76□□□□□ -1.49
COPS3-208ENST00000486032 TP53INP2Q8IXH6 220 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 ETFBKMTQ8IXQ9 262 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 UBALD2Q8IYN6 164 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 KATNAL2Q8IYT4 538 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 NPWQ8N729 165 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 RTL3Q8N8U3 475 aaKnown RBP5.76□□□□□ -1.49
COPS3-208ENST00000486032 CCNYQ8ND76 341 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 EXD1Q8NHP7 514 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 FIBINQ8TAL6 211 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 USP33Q8TEY7 942 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 EXOC4Q96A65 974 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 HES6Q96HZ4 224 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 CAPZA3Q96KX2 299 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 RPL10LQ96L21 214 aaKnown RBP5.76□□□□□ -1.49
COPS3-208ENST00000486032 NAPGQ99747 312 aaPredicted RBP5.76□□□□□ -1.49
COPS3-208ENST00000486032 ZNF670Q9BS34 389 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 HERPUD2Q9BSE4 406 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 TLR10Q9BXR5 811 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 OSBPL8Q9BZF1 889 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 FOXQ1Q9C009 403 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 SLC39A8Q9C0K1 460 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 FBRSL1Q9HCM7 1045 aaKnown RBP5.76□□□□□ -1.49
COPS3-208ENST00000486032 TMEM248Q9NWD8 314 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 SMARCAL1Q9NZC9 954 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 MARK1Q9P0L2 795 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 NEU3Q9UQ49 428 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 JRKLQ9Y4A0 524 aa5.76□□□□□ -1.49
COPS3-208ENST00000486032 ACTL7AQ9Y615 435 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms