RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 ARTNQ5T4W7 220 aa17.52■□□□□ 0.4
SMC4-216ENST00000485645 SFMBT2Q5VUG0 894 aa17.52■□□□□ 0.4
SMC4-216ENST00000485645 C19orf48Q6RUI8 117 aa17.52■□□□□ 0.4
SMC4-216ENST00000485645 DPY19L3Q6ZPD9 716 aa17.52■□□□□ 0.4
SMC4-216ENST00000485645 ERN2Q76MJ5 926 aaKnown RBP17.52■□□□□ 0.4
SMC4-216ENST00000485645 HORMAD1Q86X24 394 aa17.52■□□□□ 0.4
SMC4-216ENST00000485645 EMC1Q8N766 993 aa17.52■□□□□ 0.4
SMC4-216ENST00000485645 GRIN3AQ8TCU5 1115 aa17.52■□□□□ 0.4
SMC4-216ENST00000485645 SLC20A1Q8WUM9 679 aa17.52■□□□□ 0.4
SMC4-216ENST00000485645 KLK6Q92876 244 aa17.52■□□□□ 0.4
SMC4-216ENST00000485645 PPP1R16AQ96I34 528 aa17.52■□□□□ 0.4
SMC4-216ENST00000485645 GANQ9H2C0 597 aa17.52■□□□□ 0.4
SMC4-216ENST00000485645 ATP13A1Q9HD20 1204 aa17.52■□□□□ 0.4
SMC4-216ENST00000485645 PPARGC1AQ9UBK2 798 aaKnown RBP17.52■□□□□ 0.4
SMC4-216ENST00000485645 ZNF212Q9UDV6 495 aa17.52■□□□□ 0.4
SMC4-216ENST00000485645 CA5BQ9Y2D0 317 aa17.52■□□□□ 0.4
SMC4-216ENST00000485645 RAXQ9Y2V3 346 aa17.52■□□□□ 0.4
SMC4-216ENST00000485645 ARID1BQ8NFD5 2236 aaPredicted RBP17.52■□□□□ 0.39
SMC4-216ENST00000485645 URB1O60287 2271 aaKnown RBP17.51■□□□□ 0.39
SMC4-216ENST00000485645 ADAMTS20P59510 1910 aa17.51■□□□□ 0.39
SMC4-216ENST00000485645 LEFTY1O75610 366 aa17.51■□□□□ 0.39
SMC4-216ENST00000485645 ZMPSTE24O75844 475 aa17.51■□□□□ 0.39
SMC4-216ENST00000485645 PCDH8O95206 1070 aa17.51■□□□□ 0.39
SMC4-216ENST00000485645 CYP1A1P04798 512 aaPredicted RBP17.51■□□□□ 0.39
SMC4-216ENST00000485645 THEGLP0DJG4 465 aa17.51■□□□□ 0.39
SMC4-216ENST00000485645 JUPP14923 745 aa17.51■□□□□ 0.39
SMC4-216ENST00000485645 PRLRP16471 622 aa17.51■□□□□ 0.39
SMC4-216ENST00000485645 HNF1BP35680 557 aa17.51■□□□□ 0.39
SMC4-216ENST00000485645 ACADVLP49748 655 aa17.51■□□□□ 0.39
SMC4-216ENST00000485645 POLR2FP61218 127 aaKnown RBP17.51■□□□□ 0.39
SMC4-216ENST00000485645 CDR2Q01850 454 aa17.51■□□□□ 0.39
SMC4-216ENST00000485645 GNA12Q03113 381 aa17.51■□□□□ 0.39
SMC4-216ENST00000485645 CDO1Q16878 200 aa17.51■□□□□ 0.39
SMC4-216ENST00000485645 ARL13BQ3SXY8 428 aa17.51■□□□□ 0.39
SMC4-216ENST00000485645 FKBP15Q5T1M5 1219 aa17.51■□□□□ 0.39
SMC4-216ENST00000485645 KANSL1Q7Z3B3 1105 aa17.51■□□□□ 0.39
SMC4-216ENST00000485645 TMEM145Q8NBT3 493 aa17.51■□□□□ 0.39
SMC4-216ENST00000485645 TSC1Q92574 1164 aa17.51■□□□□ 0.39
SMC4-216ENST00000485645 MYOCQ99972 504 aa17.51■□□□□ 0.39
SMC4-216ENST00000485645 HDAC8Q9BY41 377 aa17.51■□□□□ 0.39
SMC4-216ENST00000485645 CEP44Q9C0F1 390 aa17.51■□□□□ 0.39
SMC4-216ENST00000485645 NOCTQ9UK39 431 aaKnown RBP17.51■□□□□ 0.39
SMC4-216ENST00000485645 RNF103O00237 685 aa17.5■□□□□ 0.39
SMC4-216ENST00000485645 ZNF821O75541 412 aaPredicted RBP17.5■□□□□ 0.39
SMC4-216ENST00000485645 CKMT2P17540 419 aa17.5■□□□□ 0.39
SMC4-216ENST00000485645 HNRNPA2B1P22626 353 aaKnown RBP17.5■□□□□ 0.39
SMC4-216ENST00000485645 MMP8P22894 467 aa17.5■□□□□ 0.39
SMC4-216ENST00000485645 SDC4P31431 198 aa17.5■□□□□ 0.39
SMC4-216ENST00000485645 AKT2P31751 481 aa17.5■□□□□ 0.39
SMC4-216ENST00000485645 SOX5P35711 763 aa17.5■□□□□ 0.39
SMC4-216ENST00000485645 KLK7P49862 253 aa17.5■□□□□ 0.39
SMC4-216ENST00000485645 SERPINH1P50454 418 aaKnown RBP17.5■□□□□ 0.39
SMC4-216ENST00000485645 DNA2P51530 1060 aa17.5■□□□□ 0.39
SMC4-216ENST00000485645 FMO1Q01740 532 aa17.5■□□□□ 0.39
SMC4-216ENST00000485645 KRT31Q15323 416 aa17.5■□□□□ 0.39
SMC4-216ENST00000485645 ZNF284Q2VY69 593 aa17.5■□□□□ 0.39
SMC4-216ENST00000485645 CDKAL1Q5VV42 579 aa17.5■□□□□ 0.39
SMC4-216ENST00000485645 DRC7Q8IY82 874 aa17.5■□□□□ 0.39
SMC4-216ENST00000485645 PCDH20Q8N6Y1 951 aaKnown RBP17.5■□□□□ 0.39
SMC4-216ENST00000485645 RXFP2Q8WXD0 754 aa17.5■□□□□ 0.39
SMC4-216ENST00000485645 HEPHQ9BQS7 1158 aa17.5■□□□□ 0.39
SMC4-216ENST00000485645 NLRC4Q9NPP4 1024 aa17.5■□□□□ 0.39
SMC4-216ENST00000485645 FAM207AQ9NSI2 230 aaPredicted RBP17.5■□□□□ 0.39
SMC4-216ENST00000485645 OR12D3Q9UGF7 316 aa17.5■□□□□ 0.39
SMC4-216ENST00000485645 DAAM1Q9Y4D1 1078 aa17.5■□□□□ 0.39
SMC4-216ENST00000485645 SDC3O75056 442 aa17.49■□□□□ 0.39
SMC4-216ENST00000485645 CHRNB2P17787 502 aa17.49■□□□□ 0.39
SMC4-216ENST00000485645 ADRA1BP35368 520 aa17.49■□□□□ 0.39
SMC4-216ENST00000485645 ETFBP38117 255 aa17.49■□□□□ 0.39
SMC4-216ENST00000485645 NEK3P51956 506 aa17.49■□□□□ 0.39
SMC4-216ENST00000485645 ARF5P84085 180 aa17.49■□□□□ 0.39
SMC4-216ENST00000485645 NRG1Q02297 640 aaPredicted RBP17.49■□□□□ 0.39
SMC4-216ENST00000485645 ILKQ13418 452 aa17.49■□□□□ 0.39
SMC4-216ENST00000485645 C15orf59Q2T9L4 293 aaPredicted RBP17.49■□□□□ 0.39
SMC4-216ENST00000485645 CCDC14Q49A88 953 aa17.49■□□□□ 0.39
SMC4-216ENST00000485645 CARD16Q5EG05 197 aa17.49■□□□□ 0.39
SMC4-216ENST00000485645 TRIM72Q6ZMU5 477 aa17.49■□□□□ 0.39
SMC4-216ENST00000485645 PHLDB2Q86SQ0 1253 aa17.49■□□□□ 0.39
SMC4-216ENST00000485645 SLC30A5Q8TAD4 765 aa17.49■□□□□ 0.39
SMC4-216ENST00000485645 HNRNPLLQ8WVV9 542 aaKnown RBP17.49■□□□□ 0.39
SMC4-216ENST00000485645 C11orf70Q9BRQ4 267 aa17.49■□□□□ 0.39
SMC4-216ENST00000485645 RETREG1Q9H6L5 497 aa17.49■□□□□ 0.39
SMC4-216ENST00000485645 FZD3Q9NPG1 666 aa17.49■□□□□ 0.39
SMC4-216ENST00000485645 LMBRD1Q9NUN5 540 aa17.49■□□□□ 0.39
SMC4-216ENST00000485645 ZFR2Q9UPR6 939 aaKnown RBP17.49■□□□□ 0.39
SMC4-216ENST00000485645 WASF2Q9Y6W5 498 aa17.49■□□□□ 0.39
SMC4-216ENST00000485645 CELSR3Q9NYQ7 3312 aa17.49■□□□□ 0.39
SMC4-216ENST00000485645 TRPM6Q9BX84 2022 aa17.48■□□□□ 0.39
SMC4-216ENST00000485645 STAT1P42224 750 aa17.48■□□□□ 0.39
SMC4-216ENST00000485645 CLDN6P56747 220 aa17.48■□□□□ 0.39
SMC4-216ENST00000485645 JAM2P57087 298 aa17.48■□□□□ 0.39
SMC4-216ENST00000485645 COL28A1Q2UY09 1125 aa17.48■□□□□ 0.39
SMC4-216ENST00000485645 RAB6CQ53S08 254 aa17.48■□□□□ 0.39
SMC4-216ENST00000485645 HS1BP3Q53T59 392 aa17.48■□□□□ 0.39
SMC4-216ENST00000485645 SEL1L3Q68CR1 1132 aa17.48■□□□□ 0.39
SMC4-216ENST00000485645 RWDD4Q6NW29 188 aaKnown RBP17.48■□□□□ 0.39
SMC4-216ENST00000485645 FBXL19Q6PCT2 694 aa17.48■□□□□ 0.39
SMC4-216ENST00000485645 OR13H1Q8NG92 308 aa17.48■□□□□ 0.39
SMC4-216ENST00000485645 JOSD2Q8TAC2 188 aa17.48■□□□□ 0.39
SMC4-216ENST00000485645 CALN1Q9BXU9 219 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms