RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, human

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VTI1A-205	ENST00000483122	TERB1	Q8NA31	727 aa		11.99	□□□□□ -0.49
VTI1A-205	ENST00000483122	CANT1	Q8WVQ1	401 aa		11.99	□□□□□ -0.49
VTI1A-205	ENST00000483122	CYGB	Q8WWM9	190 aa		11.99	□□□□□ -0.49
VTI1A-205	ENST00000483122	ARNTL2	Q8WYA1	636 aa		11.99	□□□□□ -0.49
VTI1A-205	ENST00000483122	MRO	Q9BYG7	248 aa		11.99	□□□□□ -0.49
VTI1A-205	ENST00000483122	MTMR12	Q9C0I1	747 aa		11.99	□□□□□ -0.49
VTI1A-205	ENST00000483122	NIF3L1	Q9GZT8	377 aa		11.99	□□□□□ -0.49
VTI1A-205	ENST00000483122	KLHL25	Q9H0H3	589 aa		11.99	□□□□□ -0.49
VTI1A-205	ENST00000483122	EHD1	Q9H4M9	534 aa		11.99	□□□□□ -0.49
VTI1A-205	ENST00000483122	TRPV5	Q9NQA5	729 aa		11.99	□□□□□ -0.49
VTI1A-205	ENST00000483122	SCHIP1	Q9P0W5	487 aa	Predicted RBP	11.99	□□□□□ -0.49
VTI1A-205	ENST00000483122	SLC27A5	Q9Y2P5	690 aa		11.99	□□□□□ -0.49
VTI1A-205	ENST00000483122	TCAF1	Q9Y4C2	921 aa		11.99	□□□□□ -0.49
VTI1A-205	ENST00000483122	STYXL1	Q9Y6J8	313 aa		11.99	□□□□□ -0.49
VTI1A-205	ENST00000483122	MYO18A	Q92614	2054 aa	Known RBP	11.99	□□□□□ -0.49
VTI1A-205	ENST00000483122	ADGRA2	Q96PE1	1338 aa		11.99	□□□□□ -0.49
VTI1A-205	ENST00000483122	HEATR9	A2RTY3	570 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	KPNA7	A9QM74	516 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	GCAT	O75600	419 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	IL18RAP	O95256	599 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	MYCL	P12524	364 aa	Predicted RBP	11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	BMP2	P12643	396 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	TGM2	P21980	687 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	TCEA1	P23193	301 aa	Known RBP	11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	GNL1	P36915	607 aa	Predicted RBP	11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	OPRL1	P41146	370 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	EML3	Q32P44	896 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	SLC36A3	Q495N2	470 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	ZNF618	Q5T7W0	954 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	FAM102A	Q5T9C2	384 aa	Predicted RBP	11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	SCYL2	Q6P3W7	929 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	NIPA1	Q7RTP0	329 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	RAVER1	Q8IY67	606 aa	Known RBP	11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	MFSD2A	Q8NA29	543 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	DUS3L	Q96G46	650 aa	Known RBP	11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	ADPGK	Q9BRR6	497 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	MTG1	Q9BT17	334 aa	Predicted RBP	11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	UNK	Q9C0B0	810 aa	Known RBP	11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	COA1	Q9GZY4	146 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	TXNDC16	Q9P2K2	825 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	GABBR1	Q9UBS5	961 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	FAM47E-STBD1	D6RA91	191 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	NOL3	O60936	208 aa	Known RBP	11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	JRK	O75564	520 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	GRAP2	O75791	330 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	CLPX	O76031	633 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	STBD1	O95210	358 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	TKT	P29401	623 aa	Known RBP	11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	ADSL	P30566	484 aa	Predicted RBP	11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	GP5	P40197	560 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	TNFSF9	P41273	254 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	MAGEA12	P43365	314 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	GRIA4	P48058	902 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	PSMD8	P48556	350 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	JAK3	P52333	1124 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	PGGT1B	P53609	377 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	GRSF1	Q12849	480 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	PITRM1	Q5JRX3	1037 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	LRRC8E	Q6NSJ5	796 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	ERMP1	Q7Z2K6	904 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	PTCD2	Q8WV60	388 aa	Known RBP	11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	C1orf50	Q9BV19	199 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	NDEL1	Q9GZM8	345 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	UNC93B1	Q9H1C4	597 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	VRTN	Q9H8Y1	702 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	PDLIM7	Q9NR12	457 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	OXSM	Q9NWU1	459 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	WDR81	Q562E7	1941 aa		11.98	□□□□□ -0.49
VTI1A-205	ENST00000483122	SCN4A	P35499	1836 aa		11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122		A0A096LPK6	155 aa		11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	TMEM233	B4DJY2	109 aa		11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122		G3V3G9	751 aa		11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	PRPSAP2	O60256	369 aa		11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	GARS	P41250	739 aa	Known RBP	11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	GTF2A2	P52657	109 aa		11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	GBE1	Q04446	702 aa		11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	TRAP1	Q12931	704 aa	Known RBP	11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	SEMA5A	Q13591	1074 aa		11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	INA	Q16352	499 aa		11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	DCAF8	Q5TAQ9	597 aa		11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	LAYN	Q6UX15	382 aa		11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	SNX31	Q8N9S9	440 aa		11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	ACVR1C	Q8NER5	493 aa		11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	HMGCLL1	Q8TB92	370 aa		11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	RXFP2	Q8WXD0	754 aa		11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	ATP6V0A1	Q93050	837 aa		11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	TOP1MT	Q969P6	601 aa		11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	PBXIP1	Q96AQ6	731 aa		11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	MCRS1	Q96EZ8	462 aa		11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	ANKRD36BP1	Q96IX9	119 aa		11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	PIWIL1	Q96J94	861 aa	Known RBP	11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	ZNF641	Q96N77	438 aa	Predicted RBP	11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	TSPAN18	Q96SJ8	248 aa		11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	CSF3R	Q99062	836 aa		11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	CTRC	Q99895	268 aa		11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	PSD2	Q9BQI7	771 aa		11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	EFHD1	Q9BUP0	239 aa		11.97	□□□□□ -0.49
VTI1A-205	ENST00000483122	SOX17	Q9H6I2	414 aa	Predicted RBP	11.97	□□□□□ -0.49

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