RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 DOCK9Q9BZ29 2069 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 A0A1W2PR77 199 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 LRRC10BA6NIK2 292 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 SLC7A4O43246 635 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 LATO43561 262 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 CREB3O43889 395 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 RNGTTO60942 597 aaKnown RBP10.69□□□□□ -0.7
CPSF4-212ENST00000482251 ZNF821O75541 412 aaPredicted RBP10.69□□□□□ -0.7
CPSF4-212ENST00000482251 LEFTY1O75610 366 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 ZMPSTE24O75844 475 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 PLEKP08567 350 aaPredicted RBP10.69□□□□□ -0.7
CPSF4-212ENST00000482251 ATXN1LP0C7T5 689 aaKnown RBP10.69□□□□□ -0.7
CPSF4-212ENST00000482251 FERP16591 822 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 GKP32189 559 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 CLCN6P51797 869 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 GSCP56915 257 aaPredicted RBP10.69□□□□□ -0.7
CPSF4-212ENST00000482251 C1QBPQ07021 282 aaKnown RBP10.69□□□□□ -0.7
CPSF4-212ENST00000482251 HNRNPDQ14103 355 aaKnown RBP10.69□□□□□ -0.7
CPSF4-212ENST00000482251 ASIC2Q16515 512 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 ZNF423Q2M1K9 1284 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 ARSIQ5FYB1 569 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 E4F1Q66K89 784 aaPredicted RBP10.69□□□□□ -0.7
CPSF4-212ENST00000482251 RETSATQ6NUM9 610 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 RAB44Q7Z6P3 723 aaPredicted RBP10.69□□□□□ -0.7
CPSF4-212ENST00000482251 PRPF39Q86UA1 669 aaKnown RBP10.69□□□□□ -0.7
CPSF4-212ENST00000482251 NLRP14Q86W24 1093 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 MARCH9Q86YJ5 346 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 RYBPQ8N488 228 aaPredicted RBP10.69□□□□□ -0.7
CPSF4-212ENST00000482251 BAHD1Q8TBE0 780 aaPredicted RBP10.69□□□□□ -0.7
CPSF4-212ENST00000482251 BAP1Q92560 729 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 GATA6Q92908 595 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 FAM131CQ96AQ9 280 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 ELF4Q99607 663 aaPredicted RBP10.69□□□□□ -0.7
CPSF4-212ENST00000482251 RTN4Q9NQC3 1192 aaKnown RBP10.69□□□□□ -0.7
CPSF4-212ENST00000482251 GDF3Q9NR23 364 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 GPATCH2LQ9NWQ4 482 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 ARHGAP20Q9P2F6 1191 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 PPARGC1AQ9UBK2 798 aaKnown RBP10.69□□□□□ -0.7
CPSF4-212ENST00000482251 NEUROG3Q9Y4Z2 214 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 PCDHGB2Q9Y5G2 931 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 WASF2Q9Y6W5 498 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 ZFHX4Q86UP3 3567 aa10.69□□□□□ -0.7
CPSF4-212ENST00000482251 A0A1B0GTQ1 180 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 A0A1W2PQU0 124 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 TCRBV5S1A1TA0A578 114 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 SYCE3A1L190 88 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 ANKRD62A6NC57 917 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 SIGLEC16A6NMB1 481 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 C10orf142B7Z368 130 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 SLC31A1O15431 190 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 RAMP2O60895 175 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 SDC3O75056 442 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 PCDH8O95206 1070 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 PRNPP04156 253 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 PROS1P07225 676 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 RHOQP17081 205 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 GRK6P43250 576 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 MAPKAPK2P49137 400 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 ZNF165P49910 485 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 CCNHP51946 323 aaPredicted RBP10.68□□□□□ -0.7
CPSF4-212ENST00000482251 NXPH1P58417 271 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 OGDHQ02218 1023 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 SUZ12Q15022 739 aaKnown RBP10.68□□□□□ -0.7
CPSF4-212ENST00000482251 SHBQ15464 509 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 SETMARQ53H47 684 aaPredicted RBP10.68□□□□□ -0.7
CPSF4-212ENST00000482251 SLC45A4Q5BKX6 768 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 EFHC2Q5JST6 749 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 ACBD5Q5T8D3 534 aaPredicted RBP10.68□□□□□ -0.7
CPSF4-212ENST00000482251 SEL1L3Q68CR1 1132 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 DCUN1D2Q6PH85 259 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 ZNF783Q6ZMS7 281 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 SLFN11Q7Z7L1 901 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 TRIM69Q86WT6 500 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 SPATS2Q86XZ4 545 aaKnown RBP10.68□□□□□ -0.7
CPSF4-212ENST00000482251 MCOLN2Q8IZK6 566 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 ZCCHC14Q8WYQ9 949 aaKnown RBP10.68□□□□□ -0.7
CPSF4-212ENST00000482251 CENPIQ92674 756 aaPredicted RBP10.68□□□□□ -0.7
CPSF4-212ENST00000482251 ARHGEF2Q92974 986 aaKnown RBP10.68□□□□□ -0.7
CPSF4-212ENST00000482251 SKA1Q96BD8 255 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 BPIFA3Q9BQP9 254 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 OSBPL2Q9H1P3 480 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 CAAP1Q9H8G2 361 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 TMEM248Q9NWD8 314 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 TOR4AQ9NXH8 423 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 ZMIZ1Q9ULJ6 1067 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 APOBEC2Q9Y235 224 aaKnown RBP10.68□□□□□ -0.7
CPSF4-212ENST00000482251 AKAP13Q12802 2813 aa10.68□□□□□ -0.7
CPSF4-212ENST00000482251 IGF2RP11717 2491 aa10.67□□□□□ -0.7
CPSF4-212ENST00000482251 SMTNL1A8MU46 457 aa10.67□□□□□ -0.7
CPSF4-212ENST00000482251 TLR4O00206 839 aa10.67□□□□□ -0.7
CPSF4-212ENST00000482251 PCDHGA12O60330 932 aa10.67□□□□□ -0.7
CPSF4-212ENST00000482251 TRIM16O95361 564 aa10.67□□□□□ -0.7
CPSF4-212ENST00000482251 CD160O95971 181 aa10.67□□□□□ -0.7
CPSF4-212ENST00000482251 ITGAVP06756 1048 aa10.67□□□□□ -0.7
CPSF4-212ENST00000482251 TNFAIP3P21580 790 aa10.67□□□□□ -0.7
CPSF4-212ENST00000482251 EPHA8P29322 1005 aaPredicted RBP10.67□□□□□ -0.7
CPSF4-212ENST00000482251 EPHB2P29323 1055 aa10.67□□□□□ -0.7
CPSF4-212ENST00000482251 NEK3P51956 506 aa10.67□□□□□ -0.7
CPSF4-212ENST00000482251 ZNF143P52747 638 aaPredicted RBP10.67□□□□□ -0.7
CPSF4-212ENST00000482251 CLDN6P56747 220 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms