RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 CBWD5Q5RIA9 395 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 TUSC5Q8IXB3 177 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 ZDHHC14Q8IZN3 488 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 DNERQ8NFT8 737 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 SPATA18Q8TC71 538 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 CLEC4CQ8WTT0 213 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 NYXQ9GZU5 481 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 CTDSP1Q9GZU7 261 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 SLC25A32Q9H2D1 315 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 CARS2Q9HA77 564 aaKnown RBP3.47□□□□□ -1.85
SMC6-208ENST00000481708 COA3Q9Y2R0 106 aaPredicted RBP3.47□□□□□ -1.85
SMC6-208ENST00000481708 BRCA2P51587 3418 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 AGAP5A6NIR3 686 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 OR6C76A6NM76 312 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 A8MZ25 164 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 QSOX1O00391 747 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 RIPK2O43353 540 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 PTPN3P26045 913 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 TTKP33981 857 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 BSGP35613 385 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 TCF7P36402 384 aaPredicted RBP3.47□□□□□ -1.85
SMC6-208ENST00000481708 SLC6A11P48066 632 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 ADORA2A-AS1P86434 159 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 CAMK1Q14012 370 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 IL11RAQ14626 422 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 HYAL4Q2M3T9 481 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 RABL6Q3YEC7 729 aaPredicted RBP3.47□□□□□ -1.85
SMC6-208ENST00000481708 TCP11X2Q5H9J9 407 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 EP400NLQ6ZTU2 488 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 BMP8AQ7Z5Y6 402 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 ADGRF2Q8IZF7 708 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 SPATA20Q8TB22 786 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 ZFAND2BQ8WV99 257 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 RNFT2Q96EX2 444 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 DGAT2Q96PD7 388 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 ACPTQ9BZG2 426 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 OR10A5Q9H207 317 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 HSD3B7Q9H2F3 369 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 XPNPEP3Q9NQH7 507 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 PRDM7Q9NQW5 492 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 INTS6Q9UL03 887 aaKnown RBP3.47□□□□□ -1.85
SMC6-208ENST00000481708 SMC3Q9UQE7 1217 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 PCDHB4Q9Y5E5 795 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 TEX264Q9Y6I9 313 aa3.47□□□□□ -1.85
SMC6-208ENST00000481708 KPNA7A9QM74 516 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 PAPSS1O43252 624 aaPredicted RBP3.46□□□□□ -1.85
SMC6-208ENST00000481708 PRAMEF4O60810 478 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 TSPAN9O75954 239 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 KAT7O95251 611 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 MED26O95402 600 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 ITGB7P26010 798 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 ARCN1P48444 511 aaKnown RBP3.46□□□□□ -1.85
SMC6-208ENST00000481708 PMS2P54278 862 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 GRAPQ13588 217 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 CAPSQ13938 189 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 SSPNQ14714 243 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 TNIP1Q15025 636 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 ASTE1Q2TB18 679 aaPredicted RBP3.46□□□□□ -1.85
SMC6-208ENST00000481708 MFSD14BQ5SR56 506 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 AFMIDQ63HM1 303 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 GADL1Q6ZQY3 521 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 GRAPLQ8TC17 118 aaPredicted RBP3.46□□□□□ -1.85
SMC6-208ENST00000481708 RNASE8Q8TDE3 154 aaKnown RBP3.46□□□□□ -1.85
SMC6-208ENST00000481708 HMGB4Q8WW32 186 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 KCNE4Q8WWG9 221 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 ROBO4Q8WZ75 1007 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 INTS4Q96HW7 963 aaKnown RBP3.46□□□□□ -1.85
SMC6-208ENST00000481708 CMTM3Q96MX0 182 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 EDEM2Q9BV94 578 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 TNMDQ9H2S6 317 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 BCO1Q9HAY6 547 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 MAGEE1Q9HCI5 957 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 NDUFAF4Q9P032 175 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 ACTR3BQ9P1U1 418 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 ZNF624Q9P2J8 865 aaPredicted RBP3.46□□□□□ -1.85
SMC6-208ENST00000481708 ZDHHC8Q9ULC8 765 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 DUSP12Q9UNI6 340 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 CHD9Q3L8U1 2897 aa3.46□□□□□ -1.85
SMC6-208ENST00000481708 DENND4CQ5VZ89 1909 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 LIASO43766 372 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 CD8BP10966 210 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 ZFXP17010 805 aaPredicted RBP3.46□□□□□ -1.86
SMC6-208ENST00000481708 MCM3P25205 808 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 MAPK3P27361 379 aaPredicted RBP3.46□□□□□ -1.86
SMC6-208ENST00000481708 CTGFP29279 349 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 ADRA1BP35368 520 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 CCNA1P78396 465 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 BEX3Q00994 111 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 TUBB2AQ13885 445 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 SLC29A2Q14542 456 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 GPR162Q16538 588 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 CR1LQ2VPA4 569 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 TIGD5Q53EQ6 642 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 FAM111BQ6SJ93 734 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 C17orf99Q6UX52 265 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 SLC2A12Q8TD20 617 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 RNF139Q8WU17 664 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 ZNF75CPQ92670 426 aaPredicted RBP3.46□□□□□ -1.86
SMC6-208ENST00000481708 SYAP1Q96A49 352 aaPredicted RBP3.46□□□□□ -1.86
SMC6-208ENST00000481708 CAPNS2Q96L46 248 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms