RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 BZW2Q9Y6E2 419 aaKnown RBP11.69□□□□□ -0.54
CCM2-213ENST00000480658 CACNA1EQ15878 2313 aa11.69□□□□□ -0.54
CCM2-213ENST00000480658 SDK1Q7Z5N4 2213 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 COL5A1P20908 1838 aaPredicted RBP11.68□□□□□ -0.54
CCM2-213ENST00000480658 A0A0D9SEW6 157 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 EPHB6O15197 1021 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 AP1G1O43747 822 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 BNIP3LO60238 219 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 GSRP00390 522 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 ITGAVP06756 1048 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 GZMAP12544 262 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 ATP1A3P13637 1013 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 CHRNB2P17787 502 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 TFE3P19532 575 aaPredicted RBP11.68□□□□□ -0.54
CCM2-213ENST00000480658 RRM1P23921 792 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 HNF1BP35680 557 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 GGCXP38435 758 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 RXRGP48443 463 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 SUOXP51687 545 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 NXPH1P58417 271 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 RPS21P63220 83 aaKnown RBP11.68□□□□□ -0.54
CCM2-213ENST00000480658 CNTN1Q12860 1018 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 ILKQ13418 452 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 NCAPHQ15003 741 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 INO80DQ53TQ3 878 aaPredicted RBP11.68□□□□□ -0.54
CCM2-213ENST00000480658 C2CD6Q53TS8 623 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 CARD16Q5EG05 197 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 FIGNQ5HY92 759 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 MANEALQ5VSG8 457 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 ACAD10Q6JQN1 1059 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 FBXL19Q6PCT2 694 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 HORMAD1Q86X24 394 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 DRC7Q8IY82 874 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 OR2I1PQ8NGU4 316 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 FNIP1Q8TF40 1166 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 IFT43Q96FT9 208 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 PSMB7Q99436 277 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 C1QTNF7Q9BXJ2 289 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 MRPL47Q9HD33 250 aaKnown RBP11.68□□□□□ -0.54
CCM2-213ENST00000480658 RTN4Q9NQC3 1192 aaKnown RBP11.68□□□□□ -0.54
CCM2-213ENST00000480658 ZNF212Q9UDV6 495 aa11.68□□□□□ -0.54
CCM2-213ENST00000480658 TOR1BO14657 336 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 TSPAN6O43657 245 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 HYAL3O43820 417 aaPredicted RBP11.67□□□□□ -0.54
CCM2-213ENST00000480658 SNAP91O60641 907 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 RTN2O75298 545 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 RNF8O76064 485 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 LRIG2O94898 1065 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 IGSF6O95976 241 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 SERPINC1P01008 464 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 VAV1P15498 845 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 TNFAIP3P21580 790 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 HNRNPA2B1P22626 353 aaKnown RBP11.67□□□□□ -0.54
CCM2-213ENST00000480658 EPHA8P29322 1005 aaPredicted RBP11.67□□□□□ -0.54
CCM2-213ENST00000480658 EPHB2P29323 1055 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 RFC1P35251 1148 aaPredicted RBP11.67□□□□□ -0.54
CCM2-213ENST00000480658 PI4KAP42356 2102 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 IRAK1P51617 712 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 HDAC4P56524 1084 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 BNC1Q01954 994 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 PTP4A2Q12974 167 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 ACAP1Q15027 740 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 ASIC2Q16515 512 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 C15orf59Q2T9L4 293 aaPredicted RBP11.67□□□□□ -0.54
CCM2-213ENST00000480658 PIP5KL1Q5T9C9 394 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 SFMBT2Q5VUG0 894 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 TRNP1Q6NT89 227 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 WDR59Q6PJI9 974 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 NLRP14Q86W24 1093 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 RTL3Q8N8U3 475 aaKnown RBP11.67□□□□□ -0.54
CCM2-213ENST00000480658 OR2AP1Q8NGE2 309 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 OR52K2Q8NGK3 314 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 GRIN3AQ8TCU5 1115 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 GATA6Q92908 595 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 ARHGEF2Q92974 986 aaKnown RBP11.67□□□□□ -0.54
CCM2-213ENST00000480658 KLHDC7BQ96G42 594 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 FEM1CQ96JP0 617 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 GDAP1L1Q96MZ0 367 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 MCEEQ96PE7 176 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 IL21RQ9HBE5 538 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 ANLNQ9NQW6 1124 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 AIPL1Q9NZN9 384 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 NCKIPSDQ9NZQ3 722 aa11.67□□□□□ -0.54
CCM2-213ENST00000480658 A0A1B0GTH6 734 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 A0A1W2PR77 199 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 NEMP2A6NFY4 417 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 A6NNZ2 444 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 WASH4PA8MWX3 477 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 H0Y8X5 98 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 GOLGA6L19H0YKK7 550 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 I6L893 689 aaPredicted RBP11.66□□□□□ -0.54
CCM2-213ENST00000480658 LEFTY1O75610 366 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 ZMPSTE24O75844 475 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 DKK1O94907 266 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 PCDH8O95206 1070 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 POP4O95707 220 aaKnown RBP11.66□□□□□ -0.54
CCM2-213ENST00000480658 MT-CO1P00395 513 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 ALPPL2P10696 532 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 ADRB3P13945 408 aa11.66□□□□□ -0.54
CCM2-213ENST00000480658 PRKCIP41743 596 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms