RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 DPY19L3Q6ZPD9 716 aa19.25■□□□□ 0.67
ABCF3-214ENST00000480562 BNIPLQ7Z465 357 aa19.25■□□□□ 0.67
ABCF3-214ENST00000480562 PHLDB2Q86SQ0 1253 aa19.25■□□□□ 0.67
ABCF3-214ENST00000480562 HORMAD1Q86X24 394 aa19.25■□□□□ 0.67
ABCF3-214ENST00000480562 EMC1Q8N766 993 aa19.25■□□□□ 0.67
ABCF3-214ENST00000480562 EPS8L1Q8TE68 723 aa19.25■□□□□ 0.67
ABCF3-214ENST00000480562 SLC20A1Q8WUM9 679 aa19.25■□□□□ 0.67
ABCF3-214ENST00000480562 HAPLN3Q96S86 360 aa19.25■□□□□ 0.67
ABCF3-214ENST00000480562 STK33Q9BYT3 514 aa19.25■□□□□ 0.67
ABCF3-214ENST00000480562 RAB6CQ9H0N0 254 aa19.25■□□□□ 0.67
ABCF3-214ENST00000480562 NUP62CLQ9H1M0 184 aa19.25■□□□□ 0.67
ABCF3-214ENST00000480562 ZNF212Q9UDV6 495 aa19.25■□□□□ 0.67
ABCF3-214ENST00000480562 IL36AQ9UHA7 158 aa19.25■□□□□ 0.67
ABCF3-214ENST00000480562 ILVBLA1L0T0 632 aa19.24■□□□□ 0.67
ABCF3-214ENST00000480562 ZNF821O75541 412 aaPredicted RBP19.24■□□□□ 0.67
ABCF3-214ENST00000480562 ZMPSTE24O75844 475 aa19.24■□□□□ 0.67
ABCF3-214ENST00000480562 PCDH8O95206 1070 aa19.24■□□□□ 0.67
ABCF3-214ENST00000480562 HNF1BP35680 557 aa19.24■□□□□ 0.67
ABCF3-214ENST00000480562 RECQLP46063 649 aaPredicted RBP19.24■□□□□ 0.67
ABCF3-214ENST00000480562 DNA2P51530 1060 aa19.24■□□□□ 0.67
ABCF3-214ENST00000480562 ATP11AP98196 1134 aa19.24■□□□□ 0.67
ABCF3-214ENST00000480562 CCDC15Q0P6D6 951 aa19.24■□□□□ 0.67
ABCF3-214ENST00000480562 TARDBPQ13148 414 aaKnown RBP eCLIP19.24■□□□□ 0.67
ABCF3-214ENST00000480562 HES3Q5TGS1 186 aa19.24■□□□□ 0.67
ABCF3-214ENST00000480562 SEL1L3Q68CR1 1132 aa19.24■□□□□ 0.67
ABCF3-214ENST00000480562 NEK5Q6P3R8 708 aa19.24■□□□□ 0.67
ABCF3-214ENST00000480562 FBXL19Q6PCT2 694 aa19.24■□□□□ 0.67
ABCF3-214ENST00000480562 ERN2Q76MJ5 926 aaKnown RBP19.24■□□□□ 0.67
ABCF3-214ENST00000480562 DRC7Q8IY82 874 aa19.24■□□□□ 0.67
ABCF3-214ENST00000480562 MSANTD4Q8NCY6 345 aa19.24■□□□□ 0.67
ABCF3-214ENST00000480562 LRIG1Q96JA1 1093 aa19.24■□□□□ 0.67
ABCF3-214ENST00000480562 ZYG11BQ9C0D3 744 aa19.24■□□□□ 0.67
ABCF3-214ENST00000480562 ATP13A1Q9HD20 1204 aa19.24■□□□□ 0.67
ABCF3-214ENST00000480562 METTL5Q9NRN9 209 aaKnown RBP19.24■□□□□ 0.67
ABCF3-214ENST00000480562 ZFR2Q9UPR6 939 aaKnown RBP19.24■□□□□ 0.67
ABCF3-214ENST00000480562 ACTL7AQ9Y615 435 aa19.24■□□□□ 0.67
ABCF3-214ENST00000480562 TRIM38O00635 465 aa19.23■□□□□ 0.67
ABCF3-214ENST00000480562 LEFTY1O75610 366 aa19.23■□□□□ 0.67
ABCF3-214ENST00000480562 GFPT2O94808 682 aa19.23■□□□□ 0.67
ABCF3-214ENST00000480562 CDK4P11802 303 aa19.23■□□□□ 0.67
ABCF3-214ENST00000480562 CKMT2P17540 419 aa19.23■□□□□ 0.67
ABCF3-214ENST00000480562 KLK7P49862 253 aa19.23■□□□□ 0.67
ABCF3-214ENST00000480562 CLDN2P57739 230 aa19.23■□□□□ 0.67
ABCF3-214ENST00000480562 ARF5P84085 180 aa19.23■□□□□ 0.67
ABCF3-214ENST00000480562 ACBD5Q5T8D3 534 aaPredicted RBP19.23■□□□□ 0.67
ABCF3-214ENST00000480562 RETSATQ6NUM9 610 aa19.23■□□□□ 0.67
ABCF3-214ENST00000480562 SLC25A45Q8N413 288 aa19.23■□□□□ 0.67
ABCF3-214ENST00000480562 OR13H1Q8NG92 308 aa19.23■□□□□ 0.67
ABCF3-214ENST00000480562 HDAC8Q9BY41 377 aa19.23■□□□□ 0.67
ABCF3-214ENST00000480562 SCUBE2Q9NQ36 999 aa19.23■□□□□ 0.67
ABCF3-214ENST00000480562 TMEM51Q9NW97 253 aa19.23■□□□□ 0.67
ABCF3-214ENST00000480562 UCKL1Q9NWZ5 548 aa19.23■□□□□ 0.67
ABCF3-214ENST00000480562 NOCTQ9UK39 431 aaKnown RBP19.23■□□□□ 0.67
ABCF3-214ENST00000480562 WASF2Q9Y6W5 498 aa19.23■□□□□ 0.67
ABCF3-214ENST00000480562 DOCK4Q8N1I0 1966 aa19.23■□□□□ 0.67
ABCF3-214ENST00000480562 BAHCC1Q9P281 2608 aa19.22■□□□□ 0.67
ABCF3-214ENST00000480562 SIGLEC6O43699 453 aa19.22■□□□□ 0.67
ABCF3-214ENST00000480562 CHRNB2P17787 502 aa19.22■□□□□ 0.67
ABCF3-214ENST00000480562 HNRNPA2B1P22626 353 aaKnown RBP19.22■□□□□ 0.67
ABCF3-214ENST00000480562 EEF1GP26641 437 aaKnown RBP19.22■□□□□ 0.67
ABCF3-214ENST00000480562 AKT2P31751 481 aa19.22■□□□□ 0.67
ABCF3-214ENST00000480562 SERPINH1P50454 418 aaKnown RBP19.22■□□□□ 0.67
ABCF3-214ENST00000480562 GNA12Q03113 381 aa19.22■□□□□ 0.67
ABCF3-214ENST00000480562 CDO1Q16878 200 aa19.22■□□□□ 0.67
ABCF3-214ENST00000480562 C15orf59Q2T9L4 293 aaPredicted RBP19.22■□□□□ 0.67
ABCF3-214ENST00000480562 PROX2Q3B8N5 592 aa19.22■□□□□ 0.67
ABCF3-214ENST00000480562 ZNF783Q6ZMS7 281 aa19.22■□□□□ 0.67
ABCF3-214ENST00000480562 NXPE2Q96DL1 559 aa19.22■□□□□ 0.67
ABCF3-214ENST00000480562 CRELD1Q96HD1 420 aa19.22■□□□□ 0.67
ABCF3-214ENST00000480562 DCBLD2Q96PD2 775 aa19.22■□□□□ 0.67
ABCF3-214ENST00000480562 CALN1Q9BXU9 219 aa19.22■□□□□ 0.67
ABCF3-214ENST00000480562 VPS16Q9H269 839 aa19.22■□□□□ 0.67
ABCF3-214ENST00000480562 GANQ9H2C0 597 aa19.22■□□□□ 0.67
ABCF3-214ENST00000480562 KLHL11Q9NVR0 708 aa19.22■□□□□ 0.67
ABCF3-214ENST00000480562 FCF1Q9Y324 198 aaKnown RBP19.22■□□□□ 0.67
ABCF3-214ENST00000480562 IGSF10Q6WRI0 2623 aa19.21■□□□□ 0.67
ABCF3-214ENST00000480562 GJB6O95452 261 aa19.21■□□□□ 0.67
ABCF3-214ENST00000480562 DGKAP23743 735 aa19.21■□□□□ 0.67
ABCF3-214ENST00000480562 ACVRL1P37023 503 aa19.21■□□□□ 0.67
ABCF3-214ENST00000480562 SEMG2Q02383 582 aa19.21■□□□□ 0.67
ABCF3-214ENST00000480562 SLC20A2Q08357 652 aa19.21■□□□□ 0.67
ABCF3-214ENST00000480562 MAPK8IP2Q13387 824 aaPredicted RBP19.21■□□□□ 0.67
ABCF3-214ENST00000480562 SOWAHCQ53LP3 525 aaPredicted RBP19.21■□□□□ 0.67
ABCF3-214ENST00000480562 GCNT7Q6ZNI0 430 aa19.21■□□□□ 0.67
ABCF3-214ENST00000480562 ARCQ7LC44 396 aa19.21■□□□□ 0.67
ABCF3-214ENST00000480562 PCDH20Q8N6Y1 951 aaKnown RBP19.21■□□□□ 0.67
ABCF3-214ENST00000480562 SLC30A5Q8TAD4 765 aa19.21■□□□□ 0.67
ABCF3-214ENST00000480562 RXFP2Q8WXD0 754 aa19.21■□□□□ 0.67
ABCF3-214ENST00000480562 PPP1R16AQ96I34 528 aa19.21■□□□□ 0.67
ABCF3-214ENST00000480562 HEPHQ9BQS7 1158 aa19.21■□□□□ 0.67
ABCF3-214ENST00000480562 MAGEB5Q9BZ81 275 aa19.21■□□□□ 0.67
ABCF3-214ENST00000480562 CEP44Q9C0F1 390 aa19.21■□□□□ 0.67
ABCF3-214ENST00000480562 NDFIP2Q9NV92 336 aa19.21■□□□□ 0.67
ABCF3-214ENST00000480562 LOC400499M0QZD8 3231 aa19.21■□□□□ 0.67
ABCF3-214ENST00000480562 A0A087WV48 116 aa19.2■□□□□ 0.66
ABCF3-214ENST00000480562 FFAR2O15552 330 aa19.2■□□□□ 0.66
ABCF3-214ENST00000480562 ADRA1BP35368 520 aa19.2■□□□□ 0.66
ABCF3-214ENST00000480562 CCNHP51946 323 aaPredicted RBP19.2■□□□□ 0.66
ABCF3-214ENST00000480562 NEK3P51956 506 aa19.2■□□□□ 0.66
ABCF3-214ENST00000480562 POLR2FP61218 127 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms