RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 PLPP6Q8IY26 295 aa12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 BBS5Q8N3I7 341 aa12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 PCDH20Q8N6Y1 951 aaKnown RBP12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 SPATA13Q96N96 652 aa12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 PSKH2Q96QS6 385 aa12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 TMEM121Q9BTD3 319 aa12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 SEPT3Q9UH03 358 aa12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 TRHDEQ9UKU6 1024 aa12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 HCN2Q9UL51 889 aa12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 ZNF148Q9UQR1 794 aa12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 MRPS17Q9Y2R5 130 aaKnown RBP12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 ANKRD36A6QL64 1941 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 KCNK1O00180 336 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 RNF103O00237 685 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 GCATO75600 419 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 GAS8O95995 478 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 GSRP00390 522 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 MT-CO1P00395 513 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 EGFP01133 1207 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 NNMTP40261 264 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 MMP13P45452 471 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 KCNJ1P48048 391 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 STK19P49842 368 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 GDF10P55107 478 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 ZXDAP98168 799 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 C2orf54Q08AI8 447 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 SLC10A7Q0GE19 358 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 SNX1Q13596 522 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 ZNF234Q14588 700 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 ZNF235Q14590 738 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 SLC14A2Q15849 920 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 RALGPS1Q5JS13 557 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 DGKKQ5KSL6 1271 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 C22orf39Q6P5X5 142 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 LINGO4Q6UY18 593 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 SYDE1Q6ZW31 735 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 SFTPA1Q8IWL2 248 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 CCDC105Q8IYK2 499 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 SYNPOQ8N3V7 929 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 MMGT1Q8N4V1 131 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 TEKT5Q96M29 485 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 NECAB3Q96P71 396 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 UHRF1Q96T88 793 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 NELL2Q99435 816 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 MGME1Q9BQP7 344 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 OSBPL6Q9BZF3 934 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 TMEM245Q9H330 911 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 PCDH9Q9HC56 1237 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 LTB4R2Q9NPC1 389 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 LHX3Q9UBR4 397 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 FBXL21Q9UKT6 434 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 CA14Q9ULX7 337 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 ATP8A1Q9Y2Q0 1164 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 NEU2Q9Y3R4 380 aa12.76□□□□□ -0.37
TRAPPC12-218ENST00000479897 KANSL1LA0AUZ9 987 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 SGK1O00141 431 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 SMAD6O43541 496 aaKnown RBP12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 ZNF821O75541 412 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 ECEL1O95672 775 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 HLA-DQB2P05538 268 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 CR2P20023 1033 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 PTGIRP43119 386 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 CSNK1DP48730 415 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 ST8SIA6P61647 398 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 MRPS21P82921 87 aaKnown RBP12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 SIGLEC14Q08ET2 396 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 NSUN2Q08J23 767 aaKnown RBP eCLIP12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 PTK6Q13882 451 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 LRRC32Q14392 662 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 CYTH1Q15438 398 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 HNRNPA1L2Q32P51 320 aaKnown RBP12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 ANKRD20A2Q5SQ80 823 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 ANKRD20A1Q5TYW2 823 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 ANKRD20A3Q5VUR7 823 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 EGFLAMQ63HQ2 1017 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 ITPRIPL1Q6GPH6 555 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 C4orf22Q6V702 233 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 B4GALNT4Q76KP1 1039 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 TRMT11Q7Z4G4 463 aaKnown RBP12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 KLHL7Q8IXQ5 586 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 KLHDC8BQ8IXV7 354 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 ZNF567Q8N184 647 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 CNTD1Q8N815 330 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 ZNF513Q8N8E2 541 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 CCDC89Q8N998 374 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 FAM71DQ8N9W8 422 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 ATP11CQ8NB49 1132 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 CCHCR1Q8TD31 782 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 FRS2Q8WU20 508 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 CYB5D2Q8WUJ1 264 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 LRRN4Q8WUT4 740 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 SORCS1Q8WY21 1168 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 RPL10LQ96L21 214 aaKnown RBP12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 CCDC114Q96M63 670 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 CINPQ9BW66 212 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 CARD6Q9BX69 1037 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 POLR1EQ9GZS1 481 aaKnown RBP12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 GBA3Q9H227 469 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 C10orf88Q9H8K7 445 aa12.75□□□□□ -0.37
TRAPPC12-218ENST00000479897 RRAGDQ9NQL2 400 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms