RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 GYS2P54840 703 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 OXCT1P55809 520 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 PRSS12P56730 875 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 YWHAZP63104 245 aaKnown RBP6.84□□□□□ -1.31
VCP-205ENST00000479300 NNTQ13423 1086 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 IQCB1Q15051 598 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 CST6Q15828 149 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 STX1AQ16623 288 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 MAN2A1Q16706 1144 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 HNRNPA1L2Q32P51 320 aaKnown RBP6.84□□□□□ -1.31
VCP-205ENST00000479300 PKDCCQ504Y2 493 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 RABGAP1LQ5R372 815 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 ARHGAP40Q5TG30 622 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 PIK3R6Q5UE93 754 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 CDCP2Q5VXM1 449 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 NADSYN1Q6IA69 706 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 OR6B2Q6IFH4 312 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 DENND1BQ6P3S1 775 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 TRIM65Q6PJ69 517 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 KDM7AQ6ZMT4 941 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 SND1Q7KZF4 910 aaKnown RBP eCLIP6.84□□□□□ -1.312e-6■□□□□ 10.8
VCP-205ENST00000479300 BEND5Q7L4P6 421 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 CHSY1Q86X52 802 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 DHX40Q8IX18 779 aaKnown RBP6.84□□□□□ -1.31
VCP-205ENST00000479300 LGI2Q8N0V4 545 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 CACTIN-AS1Q8N1I8 211 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 SLC25A45Q8N413 288 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 ANKRD20A12PQ8NF67 263 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 CLEC4CQ8WTT0 213 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 ZNF606Q8WXB4 792 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 TTC17Q96AE7 1141 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 WBP1Q96G27 269 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 PPP1R13BQ96KQ4 1090 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 PCMTD1Q96MG8 357 aaPredicted RBP6.84□□□□□ -1.31
VCP-205ENST00000479300 PRICKLE1Q96MT3 831 aaPredicted RBP6.84□□□□□ -1.31
VCP-205ENST00000479300 KREMEN1Q96MU8 473 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 EIF3CQ99613 913 aaKnown RBP6.84□□□□□ -1.31
VCP-205ENST00000479300 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.84□□□□□ -1.31
VCP-205ENST00000479300 CLMPQ9H6B4 373 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 POPDC2Q9HBU9 364 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 ARFGAP3Q9NP61 516 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 ASCL3Q9NQ33 180 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 GDF3Q9NR23 364 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 AASDHPPTQ9NRN7 309 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.84□□□□□ -1.31
VCP-205ENST00000479300 ARHGAP20Q9P2F6 1191 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 APEX2Q9UBZ4 518 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 ADAM21Q9UKJ8 722 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 CLCA2Q9UQC9 943 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 CA5BQ9Y2D0 317 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 U3KQA8 63 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 TLN1Q9Y490 2541 aaKnown RBP6.84□□□□□ -1.31
VCP-205ENST00000479300 SYNJ2BP-COX16A0A087WUM0 186 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 TTC34A8MYJ7 566 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 E5RJQ4 531 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 CASC3O15234 703 aaKnown RBP6.83□□□□□ -1.32
VCP-205ENST00000479300 HSF2BPO75031 334 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 RNASEH2AO75792 299 aaKnown RBP6.83□□□□□ -1.32
VCP-205ENST00000479300 TRUB2O95900 331 aaKnown RBP6.83□□□□□ -1.32
VCP-205ENST00000479300 MT-CO3P00414 261 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 CALCAP01258 141 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 IGLV3-27P01718 113 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 MPOP05164 745 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 GLI1P08151 1106 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 CDK4P11802 303 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 C6P13671 934 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 VAV1P15498 845 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 ERCC5P28715 1186 aaPredicted RBP6.83□□□□□ -1.32
VCP-205ENST00000479300 CCR1P32246 355 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 SLC8A1P32418 973 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 DRD3P35462 400 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 CSKP41240 450 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 LMAN1P49257 510 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 ADPRHP54922 357 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 ETF1P62495 437 aaKnown RBP6.83□□□□□ -1.32
VCP-205ENST00000479300 TUBB4BP68371 445 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 SRSF1Q07955 248 aaKnown RBP eCLIP6.83□□□□□ -1.32
VCP-205ENST00000479300 ILKQ13418 452 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 SLC12A1Q13621 1099 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 RAPGEF1Q13905 1077 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 ARID5BQ14865 1188 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 BRD3Q15059 726 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 VWA3BQ502W6 1294 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 TAF1BQ53T94 588 aaPredicted RBP6.83□□□□□ -1.32
VCP-205ENST00000479300 DCAF6Q58WW2 860 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 FSCBQ5H9T9 825 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 TTC39BQ5VTQ0 682 aaPredicted RBP6.83□□□□□ -1.32
VCP-205ENST00000479300 C11orf57Q6ZUT1 292 aaPredicted RBP6.83□□□□□ -1.32
VCP-205ENST00000479300 LURAP1LQ8IV03 231 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 MMAAQ8IVH4 418 aaKnown RBP6.83□□□□□ -1.32
VCP-205ENST00000479300 OR2T34Q8NGX1 318 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 FIBINQ8TAL6 211 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 DQX1Q8TE96 717 aaKnown RBP6.83□□□□□ -1.32
VCP-205ENST00000479300 SNRNP27Q8WVK2 155 aaKnown RBP6.83□□□□□ -1.32
VCP-205ENST00000479300 FAM131CQ96AQ9 280 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 SKA1Q96BD8 255 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 SERAC1Q96JX3 654 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 BTN2A3PQ96KV6 586 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 LGMNQ99538 433 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 TUBGCP2Q9BSJ2 902 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms