RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 TMTC4Q5T4D3 741 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 FAM90A2PQ658T7 463 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 TLDC1Q6P9B6 456 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 FBXO38Q6PIJ6 1188 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 SLC2A7Q6PXP3 512 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 C1QL2Q7Z5L3 287 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 SRLQ86TD4 932 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 OSR1Q8TAX0 266 aaPredicted RBP5.22□□□□□ -1.57
VPS50-214ENST00000477935 ZNF566Q969W8 418 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 SGCZQ96LD1 299 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 ZNF778Q96MU6 729 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 PLEKHF1Q96S99 279 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 C1QTNF7Q9BXJ2 289 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 PRSS22Q9GZN4 317 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 BTBD3Q9Y2F9 522 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 CEP83Q9Y592 693 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 PCDHB2Q9Y5E7 798 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 PCDHGB2Q9Y5G2 931 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 ZFHX4Q86UP3 3567 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 MROH7Q68CQ1 1323 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 PRRC2BQ5JSZ5 2229 aaKnown RBP5.21□□□□□ -1.57
VPS50-214ENST00000477935 FAM186AA6NE01 2351 aa5.21□□□□□ -1.57
VPS50-214ENST00000477935 LTBP2Q14767 1821 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 CHD7Q9P2D1 2997 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.21□□□□□ -1.58
VPS50-214ENST00000477935 KCNU1A8MYU2 1149 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 PODXLO00592 558 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 FCHO1O14526 889 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 DSCR3O14972 297 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 BCAR3O75815 825 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 HSPA5P11021 654 aaKnown RBP5.21□□□□□ -1.58
VPS50-214ENST00000477935 CYBAP13498 195 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 ATP5F1P24539 256 aaPredicted RBP5.21□□□□□ -1.58
VPS50-214ENST00000477935 LMO1P25800 156 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 HSPA7P48741 367 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 JAK3P52333 1124 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 RIPK4P57078 832 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 WDR5P61964 334 aaKnown RBP5.21□□□□□ -1.58
VPS50-214ENST00000477935 RAE1P78406 368 aaKnown RBP5.21□□□□□ -1.58
VPS50-214ENST00000477935 NSUN2Q08J23 767 aaKnown RBP eCLIP5.21□□□□□ -1.58
VPS50-214ENST00000477935 BFSP2Q13515 415 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 KLF9Q13886 244 aaPredicted RBP5.21□□□□□ -1.58
VPS50-214ENST00000477935 MAPKAPK3Q16644 382 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 MPEG1Q2M385 716 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 CAVIN4Q5BKX8 364 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 CLASRPQ8N2M8 674 aaKnown RBP5.21□□□□□ -1.58
VPS50-214ENST00000477935 MAP4K1Q92918 833 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 ADGRE3Q9BY15 652 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 OSBPL5Q9H0X9 879 aaPredicted RBP5.21□□□□□ -1.58
VPS50-214ENST00000477935 NECTIN3Q9NQS3 549 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 CHST12Q9NRB3 414 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 SEMA5BQ9P283 1151 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 RNF7Q9UBF6 113 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 NRBP1Q9UHY1 535 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 MAFFQ9ULX9 164 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 VPS4AQ9UN37 437 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 MAST2Q6P0Q8 1798 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 ZNF318Q5VUA4 2279 aa5.21□□□□□ -1.58
VPS50-214ENST00000477935 ARAP2Q8WZ64 1704 aa5.2□□□□□ -1.58
VPS50-214ENST00000477935 C19orf81C9J6K1 198 aa5.2□□□□□ -1.58
VPS50-214ENST00000477935 HNRNPDLO14979 420 aaKnown RBP5.2□□□□□ -1.58
VPS50-214ENST00000477935 STRNO43815 780 aa5.2□□□□□ -1.58
VPS50-214ENST00000477935 CSF2RAP15509 400 aa5.2□□□□□ -1.58
VPS50-214ENST00000477935 ABCB4P21439 1286 aa5.2□□□□□ -1.58
VPS50-214ENST00000477935 GYG1P46976 350 aa5.2□□□□□ -1.58
VPS50-214ENST00000477935 HMGCS2P54868 508 aa5.2□□□□□ -1.58
VPS50-214ENST00000477935 GCKRQ14397 625 aa5.2□□□□□ -1.58
VPS50-214ENST00000477935 CDC42EP5Q6NZY7 148 aa5.2□□□□□ -1.58
VPS50-214ENST00000477935 LDHAL6AQ6ZMR3 332 aa5.2□□□□□ -1.58
VPS50-214ENST00000477935 NOL8Q76FK4 1167 aaKnown RBP5.2□□□□□ -1.58
VPS50-214ENST00000477935 FAM186BQ8IYM0 893 aa5.2□□□□□ -1.58
VPS50-214ENST00000477935 PRSS33Q8NF86 280 aa5.2□□□□□ -1.58
VPS50-214ENST00000477935 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.2□□□□□ -1.58
VPS50-214ENST00000477935 DEPTORQ8TB45 409 aa5.2□□□□□ -1.58
VPS50-214ENST00000477935 SMG7Q92540 1137 aaKnown RBP5.2□□□□□ -1.58
VPS50-214ENST00000477935 ATOH1Q92858 354 aaPredicted RBP5.2□□□□□ -1.58
VPS50-214ENST00000477935 GJA10Q969M2 543 aa5.2□□□□□ -1.58
VPS50-214ENST00000477935 RPL36ALQ969Q0 106 aaKnown RBP5.2□□□□□ -1.58
VPS50-214ENST00000477935 IDI2Q9BXS1 227 aa5.2□□□□□ -1.58
VPS50-214ENST00000477935 PORCNQ9H237 461 aa5.2□□□□□ -1.58
VPS50-214ENST00000477935 TXNRD2Q9NNW7 524 aa5.2□□□□□ -1.58
VPS50-214ENST00000477935 TM7SF3Q9NS93 570 aa5.2□□□□□ -1.58
VPS50-214ENST00000477935 RXFP3Q9NSD7 469 aa5.2□□□□□ -1.58
VPS50-214ENST00000477935 TBX21Q9UL17 535 aa5.2□□□□□ -1.58
VPS50-214ENST00000477935 RABGAP1Q9Y3P9 1069 aa5.2□□□□□ -1.58
VPS50-214ENST00000477935 CHD6Q8TD26 2715 aa5.2□□□□□ -1.58
VPS50-214ENST00000477935 ACACBO00763 2458 aa5.2□□□□□ -1.58
VPS50-214ENST00000477935 ELP1O95163 1332 aa5.2□□□□□ -1.58
VPS50-214ENST00000477935 TRANK1O15050 2925 aa5.2□□□□□ -1.58
VPS50-214ENST00000477935 ANKRD11Q6UB99 2663 aaPredicted RBP5.2□□□□□ -1.58
VPS50-214ENST00000477935 KMT2BQ9UMN6 2715 aaPredicted RBP5.19□□□□□ -1.58
VPS50-214ENST00000477935 DCHS1Q96JQ0 3298 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 MYO15AQ9UKN7 3530 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 KIF28PB7ZC32 967 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 E5RJQ4 531 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 TP73O15350 636 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 PLIN1O60240 522 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 IGKV5-2P06315 115 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 SRGAP2BP0DMP2 458 aa5.19□□□□□ -1.58
VPS50-214ENST00000477935 BACE1P56817 501 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms