RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 RABGAP1LQ5R372 815 aa16.73■□□□□ 0.27
TMEM53-208ENST00000476724 CTU1Q7Z7A3 348 aaKnown RBP16.73■□□□□ 0.27
TMEM53-208ENST00000476724 CMC1Q7Z7K0 106 aa16.73■□□□□ 0.27
TMEM53-208ENST00000476724 CCDC117Q8IWD4 279 aaPredicted RBP16.73■□□□□ 0.27
TMEM53-208ENST00000476724 OR10T2Q8NGX3 314 aa16.73■□□□□ 0.27
TMEM53-208ENST00000476724 DIS3LQ8TF46 1054 aaKnown RBP16.73■□□□□ 0.27
TMEM53-208ENST00000476724 AGAP2Q99490 1192 aa16.73■□□□□ 0.27
TMEM53-208ENST00000476724 CATSPERBQ9H7T0 1116 aa16.73■□□□□ 0.27
TMEM53-208ENST00000476724 CHRAC1Q9NRG0 131 aa16.73■□□□□ 0.27
TMEM53-208ENST00000476724 TMEM161AQ9NX61 479 aa16.73■□□□□ 0.27
TMEM53-208ENST00000476724 STX18Q9P2W9 335 aaKnown RBP16.73■□□□□ 0.27
TMEM53-208ENST00000476724 NLRC5Q86WI3 1866 aa16.73■□□□□ 0.27
TMEM53-208ENST00000476724 LIN7AO14910 233 aaPredicted RBP16.73■□□□□ 0.27
TMEM53-208ENST00000476724 POLD2P49005 469 aa16.73■□□□□ 0.27
TMEM53-208ENST00000476724 PRKAA2P54646 552 aa16.73■□□□□ 0.27
TMEM53-208ENST00000476724 SLC34A1Q06495 639 aa16.73■□□□□ 0.27
TMEM53-208ENST00000476724 ITGA9Q13797 1035 aa16.73■□□□□ 0.27
TMEM53-208ENST00000476724 ZRSR2Q15696 482 aaKnown RBP16.73■□□□□ 0.27
TMEM53-208ENST00000476724 TRMT5Q32P41 509 aaKnown RBP16.73■□□□□ 0.27
TMEM53-208ENST00000476724 PCID2Q5JVF3 399 aa16.73■□□□□ 0.27
TMEM53-208ENST00000476724 SUSD3Q96L08 255 aa16.73■□□□□ 0.27
TMEM53-208ENST00000476724 FAM161BQ96MY7 647 aa16.73■□□□□ 0.27
TMEM53-208ENST00000476724 FCRL5Q96RD9 977 aa16.73■□□□□ 0.27
TMEM53-208ENST00000476724 TMLHEQ9NVH6 421 aa16.73■□□□□ 0.27
TMEM53-208ENST00000476724 HCSTQ9UBK5 93 aa16.73■□□□□ 0.27
TMEM53-208ENST00000476724 SNX10Q9Y5X0 201 aa16.73■□□□□ 0.27
TMEM53-208ENST00000476724 TTC3P53804 2025 aa16.72■□□□□ 0.27
TMEM53-208ENST00000476724 IRAK2O43187 625 aa16.72■□□□□ 0.27
TMEM53-208ENST00000476724 TRIM13O60858 407 aa16.72■□□□□ 0.27
TMEM53-208ENST00000476724 C2P06681 752 aa16.72■□□□□ 0.27
TMEM53-208ENST00000476724 ATP6V1C1P21283 382 aa16.72■□□□□ 0.27
TMEM53-208ENST00000476724 HOXC13P31276 330 aa16.72■□□□□ 0.27
TMEM53-208ENST00000476724 OR1G1P47890 313 aa16.72■□□□□ 0.27
TMEM53-208ENST00000476724 IDH3AP50213 366 aa16.72■□□□□ 0.27
TMEM53-208ENST00000476724 TSPY1Q01534 308 aa16.72■□□□□ 0.27
TMEM53-208ENST00000476724 NAA25Q14CX7 972 aa16.72■□□□□ 0.27
TMEM53-208ENST00000476724 RCN1Q15293 331 aa16.72■□□□□ 0.27
TMEM53-208ENST00000476724 UGP2Q16851 508 aa16.72■□□□□ 0.27
TMEM53-208ENST00000476724 ANO4Q32M45 955 aa16.72■□□□□ 0.27
TMEM53-208ENST00000476724 TRIM60Q495X7 471 aa16.72■□□□□ 0.27
TMEM53-208ENST00000476724 RWDD4Q6NW29 188 aaKnown RBP16.72■□□□□ 0.27
TMEM53-208ENST00000476724 CNTD1Q8N815 330 aa16.72■□□□□ 0.27
TMEM53-208ENST00000476724 RDH11Q8TC12 318 aa16.72■□□□□ 0.27
TMEM53-208ENST00000476724 WDR60Q8WVS4 1066 aa16.72■□□□□ 0.27
TMEM53-208ENST00000476724 VPS39Q96JC1 886 aa16.72■□□□□ 0.27
TMEM53-208ENST00000476724 NMRAL1Q9HBL8 299 aa16.72■□□□□ 0.27
TMEM53-208ENST00000476724 IARS2Q9NSE4 1012 aaKnown RBP16.72■□□□□ 0.27
TMEM53-208ENST00000476724 PRG3Q9Y2Y8 225 aaPredicted RBP16.72■□□□□ 0.27
TMEM53-208ENST00000476724 VWA8A3KMH1 1905 aa16.72■□□□□ 0.27
TMEM53-208ENST00000476724 PTPRDP23468 1912 aa16.72■□□□□ 0.27
TMEM53-208ENST00000476724 MKI67P46013 3256 aaKnown RBP16.72■□□□□ 0.27
TMEM53-208ENST00000476724 TYMPP19971 482 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 MXRA7P84157 204 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 BTBD8Q5XKL5 378 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 OVOS1Q6IE37 1185 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 LRRTM3Q86VH5 581 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 LRRC49Q8IUZ0 686 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 PLD6Q8N2A8 252 aaKnown RBP16.71■□□□□ 0.27
TMEM53-208ENST00000476724 ATPAF2Q8N5M1 289 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 PTCD2Q8WV60 388 aaKnown RBP16.71■□□□□ 0.27
TMEM53-208ENST00000476724 CELF6Q96J87 481 aaKnown RBP16.71■□□□□ 0.27
TMEM53-208ENST00000476724 IL12RB2Q99665 862 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 GPR22Q99680 433 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 CRISPLD2Q9H0B8 497 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 HIPK3Q9H422 1215 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 PNPOQ9NVS9 261 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 ZNF212Q9UDV6 495 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.71■□□□□ 0.27
TMEM53-208ENST00000476724 ZNF195O14628 629 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 ACADSP16219 412 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 CCR1P32246 355 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 HK2P52789 917 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 TLE2Q04725 743 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 THOC5Q13769 683 aaKnown RBP16.71■□□□□ 0.27
TMEM53-208ENST00000476724 UBAP2LQ14157 1087 aaKnown RBP16.71■□□□□ 0.27
TMEM53-208ENST00000476724 METTL21CQ5VZV1 264 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 ARMC3Q5W041 872 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 TIGD7Q6NT04 549 aaPredicted RBP16.71■□□□□ 0.27
TMEM53-208ENST00000476724 ANKRD33Q7Z3H0 272 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 DNAJC9Q8WXX5 260 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 SEPT8Q92599 483 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 TSNARE1Q96NA8 513 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 SMOC2Q9H3U7 446 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 RHOJQ9H4E5 214 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 ZNF358Q9NW07 568 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 TLK1Q9UKI8 766 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 PCDHB7Q9Y5E2 793 aa16.71■□□□□ 0.27
TMEM53-208ENST00000476724 G3V2L1 256 aa16.7■□□□□ 0.26
TMEM53-208ENST00000476724 MATN3O15232 486 aa16.7■□□□□ 0.26
TMEM53-208ENST00000476724 SIN3BO75182 1162 aa16.7■□□□□ 0.26
TMEM53-208ENST00000476724 COL6A2P12110 1019 aa16.7■□□□□ 0.26
TMEM53-208ENST00000476724 TPH1P17752 444 aa16.7■□□□□ 0.26
TMEM53-208ENST00000476724 NMBRP28336 390 aa16.7■□□□□ 0.26
TMEM53-208ENST00000476724 CSRP3P50461 194 aa16.7■□□□□ 0.26
TMEM53-208ENST00000476724 GEMP55040 296 aa16.7■□□□□ 0.26
TMEM53-208ENST00000476724 PPP2R5DQ14738 602 aa16.7■□□□□ 0.26
TMEM53-208ENST00000476724 FSCBQ5H9T9 825 aa16.7■□□□□ 0.26
TMEM53-208ENST00000476724 PKN3Q6P5Z2 889 aa16.7■□□□□ 0.26
TMEM53-208ENST00000476724 POTEHQ6S545 545 aa16.7■□□□□ 0.26
TMEM53-208ENST00000476724 ULK2Q8IYT8 1036 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms