RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 M0QYV0 167 aa7□□□□□ -1.29
UBR4-212ENST00000475973 B4GALT5O43286 388 aa7□□□□□ -1.29
UBR4-212ENST00000475973 OPHN1O60890 802 aa7□□□□□ -1.29
UBR4-212ENST00000475973 ZBED1O96006 694 aa7□□□□□ -1.29
UBR4-212ENST00000475973 ITGB3P05106 788 aa7□□□□□ -1.29
UBR4-212ENST00000475973 ENO1P06733 434 aaKnown RBP7□□□□□ -1.29
UBR4-212ENST00000475973 PDHA1P08559 390 aa7□□□□□ -1.29
UBR4-212ENST00000475973 CXCL8P10145 99 aa7□□□□□ -1.29
UBR4-212ENST00000475973 P4HA1P13674 534 aa7□□□□□ -1.29
UBR4-212ENST00000475973 PGAM1P18669 254 aa7□□□□□ -1.29
UBR4-212ENST00000475973 POU3F3P20264 500 aaPredicted RBP7□□□□□ -1.29
UBR4-212ENST00000475973 CYP2F1P24903 491 aa7□□□□□ -1.29
UBR4-212ENST00000475973 GRIA1P42261 906 aa7□□□□□ -1.29
UBR4-212ENST00000475973 ATP5OP48047 213 aa7□□□□□ -1.29
UBR4-212ENST00000475973 SLC1A6P48664 564 aa7□□□□□ -1.29
UBR4-212ENST00000475973 HCAR3P49019 387 aa7□□□□□ -1.29
UBR4-212ENST00000475973 PRKAA2P54646 552 aa7□□□□□ -1.29
UBR4-212ENST00000475973 RBP5P82980 135 aa7□□□□□ -1.29
UBR4-212ENST00000475973 GBE1Q04446 702 aa7□□□□□ -1.29
UBR4-212ENST00000475973 NSUN2Q08J23 767 aaKnown RBP eCLIP7□□□□□ -1.29
UBR4-212ENST00000475973 ASPHQ12797 758 aa7□□□□□ -1.29
UBR4-212ENST00000475973 DYNC1I2Q13409 638 aaKnown RBP7□□□□□ -1.29
UBR4-212ENST00000475973 RBBP5Q15291 538 aaKnown RBP7□□□□□ -1.29
UBR4-212ENST00000475973 GRIK4Q16099 956 aa7□□□□□ -1.29
UBR4-212ENST00000475973 CNPY1Q3B7I2 92 aa7□□□□□ -1.29
UBR4-212ENST00000475973 CCDC153Q494R4 210 aa7□□□□□ -1.29
UBR4-212ENST00000475973 SFT2D3Q587I9 215 aa7□□□□□ -1.29
UBR4-212ENST00000475973 ZNF484Q5JVG2 852 aa7□□□□□ -1.29
UBR4-212ENST00000475973 GRTP1Q5TC63 336 aa7□□□□□ -1.29
UBR4-212ENST00000475973 IZUMO2Q6UXV1 221 aa7□□□□□ -1.29
UBR4-212ENST00000475973 LIAT1Q6ZQX7 453 aa7□□□□□ -1.29
UBR4-212ENST00000475973 EP400NLQ6ZTU2 488 aa7□□□□□ -1.29
UBR4-212ENST00000475973 TRMT1LQ7Z2T5 733 aaKnown RBP7□□□□□ -1.29
UBR4-212ENST00000475973 ZC3H18Q86VM9 953 aaKnown RBP7□□□□□ -1.29
UBR4-212ENST00000475973 SPNS2Q8IVW8 549 aa7□□□□□ -1.29
UBR4-212ENST00000475973 LRRC52Q8N7C0 313 aa7□□□□□ -1.29
UBR4-212ENST00000475973 SERBP1Q8NC51 408 aaKnown RBP eCLIP7□□□□□ -1.29
UBR4-212ENST00000475973 DBF4BQ8NFT6 615 aa7□□□□□ -1.29
UBR4-212ENST00000475973 SHKBP1Q8TBC3 707 aa7□□□□□ -1.29
UBR4-212ENST00000475973 DTX3LQ8TDB6 740 aa7□□□□□ -1.29
UBR4-212ENST00000475973 HSPH1Q92598 858 aa7□□□□□ -1.29
UBR4-212ENST00000475973 MRRFQ96E11 262 aaKnown RBP7□□□□□ -1.29
UBR4-212ENST00000475973 HPDLQ96IR7 371 aa7□□□□□ -1.29
UBR4-212ENST00000475973 MAELQ96JY0 434 aaKnown RBP7□□□□□ -1.29
UBR4-212ENST00000475973 HSFY1Q96LI6 401 aa7□□□□□ -1.29
UBR4-212ENST00000475973 SAMD11Q96NU1 681 aa7□□□□□ -1.29
UBR4-212ENST00000475973 TSPAN18Q96SJ8 248 aa7□□□□□ -1.29
UBR4-212ENST00000475973 UHRF1Q96T88 793 aaPredicted RBP7□□□□□ -1.29
UBR4-212ENST00000475973 YME1L1Q96TA2 773 aa7□□□□□ -1.29
UBR4-212ENST00000475973 GORASP1Q9BQQ3 440 aa7□□□□□ -1.29
UBR4-212ENST00000475973 NT5C1AQ9BXI3 368 aa7□□□□□ -1.29
UBR4-212ENST00000475973 CALN1Q9BXU9 219 aa7□□□□□ -1.29
UBR4-212ENST00000475973 INO80BQ9C086 356 aaPredicted RBP7□□□□□ -1.29
UBR4-212ENST00000475973 PCMTD2Q9NV79 361 aa7□□□□□ -1.29
UBR4-212ENST00000475973 SETD4Q9NVD3 440 aa7□□□□□ -1.29
UBR4-212ENST00000475973 NDE1Q9NXR1 346 aa7□□□□□ -1.29
UBR4-212ENST00000475973 LMCD1Q9NZU5 365 aa7□□□□□ -1.29
UBR4-212ENST00000475973 STK39Q9UEW8 545 aa7□□□□□ -1.29
UBR4-212ENST00000475973 CDH22Q9UJ99 828 aa7□□□□□ -1.29
UBR4-212ENST00000475973 SARDHQ9UL12 918 aa7□□□□□ -1.29
UBR4-212ENST00000475973 APOBEC2Q9Y235 224 aaKnown RBP7□□□□□ -1.29
UBR4-212ENST00000475973 DNAJC16Q9Y2G8 782 aa7□□□□□ -1.29
UBR4-212ENST00000475973 MTCH2Q9Y6C9 303 aa7□□□□□ -1.29
UBR4-212ENST00000475973 MAD1L1Q9Y6D9 718 aa7□□□□□ -1.29
UBR4-212ENST00000475973 TANC1Q9C0D5 1861 aa7□□□□□ -1.29
UBR4-212ENST00000475973 RALGAPA2Q2PPJ7 1873 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 ZCWPW2A0A1B0GU75 182 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 PRSS51A0A1B0GVH4 220 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 LCHNA4D1U4 455 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 TRIM64A6NGJ6 449 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 RRN3P2A6NIE6 340 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 TRIM64CA6NLI5 447 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 TMEM229AB2RXF0 380 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 C9IYK1 514 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 TNFRSF10AO00220 468 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 ZBTB14O43829 449 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 SMIM24O75264 130 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 H2AFYO75367 372 aaKnown RBP6.99□□□□□ -1.29
UBR4-212ENST00000475973 CIB2O75838 187 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 UPP2O95045 317 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 TFAP2AP05549 437 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 APRTP07741 180 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 ITGA2BP08514 1039 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 SBK3P0C264 359 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 CD19P15391 556 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 VCLP18206 1134 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 GP5P40197 560 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 POLD2P49005 469 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 RPS6KA3P51812 740 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 COPAP53621 1224 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 LIMK2P53671 638 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 CSE1LP55060 971 aaKnown RBP6.99□□□□□ -1.29
UBR4-212ENST00000475973 SH3BGRP55822 239 aaPredicted RBP6.99□□□□□ -1.29
UBR4-212ENST00000475973 ABCE1P61221 599 aaKnown RBP6.99□□□□□ -1.29
UBR4-212ENST00000475973 ERVK-21P61565 698 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 IGBP1P78318 339 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 SCAPQ12770 1279 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 KLF10Q13118 480 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 APOFQ13790 326 aa6.99□□□□□ -1.29
UBR4-212ENST00000475973 BMPR2Q13873 1038 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms