RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 KRT15P19012 456 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 TNFSF9P41273 254 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 TUBP50607 506 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 ZNF132P52740 706 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 SNRPFP62306 86 aaKnown RBP3.71□□□□□ -1.82
XRN1-209ENST00000472625 TNNC1P63316 161 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 NOP14P78316 857 aaKnown RBP3.71□□□□□ -1.82
XRN1-209ENST00000472625 IL13RA1P78552 427 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 SLC7A9P82251 487 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 TFAMQ00059 246 aaKnown RBP3.71□□□□□ -1.82
XRN1-209ENST00000472625 GFPT1Q06210 699 aaPredicted RBP3.71□□□□□ -1.82
XRN1-209ENST00000472625 RESTQ13127 1097 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 SLC14A1Q13336 389 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 ACAP1Q15027 740 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 SF3A2Q15428 464 aaKnown RBP3.71□□□□□ -1.82
XRN1-209ENST00000472625 CRY1Q16526 586 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 SYCP2LQ5T4T6 812 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 L1TD1Q5T7N2 865 aaKnown RBP3.71□□□□□ -1.82
XRN1-209ENST00000472625 N4BP2L1Q5TBK1 243 aaPredicted RBP3.71□□□□□ -1.82
XRN1-209ENST00000472625 LYSMD4Q5XG99 296 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 KANK2Q63ZY3 851 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 TXNDC8Q6A555 127 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 VASNQ6EMK4 673 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 SDE2Q6IQ49 451 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 ANO7Q6IWH7 933 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 LRSAM1Q6UWE0 723 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 RASSF3Q86WH2 238 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 SKAP1Q86WV1 359 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 SYT12Q8IV01 421 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 EFCAB13Q8IY85 973 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 SYCP3Q8IZU3 236 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 PDCL2Q8N4E4 241 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 RAD54LQ92698 747 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 RSPRY1Q96DX4 576 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 AJUBAQ96IF1 538 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 ZBTB45Q96K62 511 aaPredicted RBP3.71□□□□□ -1.82
XRN1-209ENST00000472625 FNBP1Q96RU3 617 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 PNKPQ96T60 521 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 SLC46A2Q9BY10 475 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 ZDHHC5Q9C0B5 715 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 NACA2Q9H009 215 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 MEGF9Q9H1U4 602 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 CUEDC2Q9H467 287 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 FAM124BQ9H5Z6 455 aaPredicted RBP3.71□□□□□ -1.82
XRN1-209ENST00000472625 MRPL44Q9H9J2 332 aaKnown RBP3.71□□□□□ -1.82
XRN1-209ENST00000472625 HPS4Q9NQG7 708 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 GDAP2Q9NXN4 497 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 DDX43Q9NXZ2 648 aaKnown RBP3.71□□□□□ -1.82
XRN1-209ENST00000472625 CGNQ9P2M7 1197 aaKnown RBP3.71□□□□□ -1.82
XRN1-209ENST00000472625 ADAM29Q9UKF5 820 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 CDH9Q9ULB4 789 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 NFE2L3Q9Y4A8 694 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 ATP23Q9Y6H3 246 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 CACNA1IQ9P0X4 2223 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 USP24Q9UPU5 2620 aa3.71□□□□□ -1.82
XRN1-209ENST00000472625 FRYQ5TBA9 3013 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 SPTBN2O15020 2390 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 VWA8A3KMH1 1905 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 CHD6Q8TD26 2715 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 E2F8A0AVK6 867 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 C4orf47A7E2U8 309 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 PP2D1A8MPX8 630 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 CBX4O00257 560 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 SCDO00767 359 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 SOAT2O75908 522 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 PRPF6O94906 941 aaKnown RBP3.7□□□□□ -1.82
XRN1-209ENST00000472625 CLSTN1O94985 981 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 KAT7O95251 611 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 GCNT3O95395 438 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 MMEP08473 750 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 KRT19P08727 400 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 HDCP19113 662 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 TNFRSF1AP19438 455 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 POU3F2P20265 443 aaPredicted RBP3.7□□□□□ -1.82
XRN1-209ENST00000472625 NMT1P30419 496 aaKnown RBP3.7□□□□□ -1.82
XRN1-209ENST00000472625 CSF2RBP32927 897 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 DDIT3P35638 169 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 TNFRSF4P43489 277 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 DHPSP49366 369 aaPredicted RBP3.7□□□□□ -1.82
XRN1-209ENST00000472625 ACOT2P49753 483 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 TOB1P50616 345 aaPredicted RBP3.7□□□□□ -1.82
XRN1-209ENST00000472625 AP3M2P53677 418 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 AMPD3Q01432 767 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 GAD2Q05329 585 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 SPAG1Q07617 926 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 SRSF5Q13243 272 aaKnown RBP3.7□□□□□ -1.82
XRN1-209ENST00000472625 TOP3AQ13472 1001 aaPredicted RBP3.7□□□□□ -1.82
XRN1-209ENST00000472625 ICAM4Q14773 271 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 STARD3Q14849 445 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 DUOXA1Q1HG43 343 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 INAVAQ3KP66 663 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 WDR45BQ5MNZ6 344 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 WSCD1Q658N2 575 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 TRIM68Q6AZZ1 485 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 TRMT10BQ6PF06 316 aaKnown RBP3.7□□□□□ -1.82
XRN1-209ENST00000472625 BORAQ6PGQ7 559 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 IL27RAQ6UWB1 636 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 ZNF720Q7Z2F6 126 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 KIAA0907Q7Z7F0 614 aaPredicted RBP3.7□□□□□ -1.82
XRN1-209ENST00000472625 WDR49Q8IV35 697 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms