RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 C8orf33Q9H7E9 229 aaPredicted RBP19.54■□□□□ 0.72
PSPC1-203ENST00000471658 NT5MQ9NPB1 228 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 ZDHHC4Q9NPG8 344 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 FEZ2Q9UHY8 353 aaPredicted RBP19.54■□□□□ 0.72
PSPC1-203ENST00000471658 HCN2Q9UL51 889 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 SORCS3Q9UPU3 1222 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 ERVW-1Q9UQF0 538 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 A0A0A0MRY4 1105 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 ZSCAN5CA6NGD5 496 aaPredicted RBP19.54■□□□□ 0.72
PSPC1-203ENST00000471658 GCATO75600 419 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 TMCC1O94876 653 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 APODP05090 189 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 HLA-DQB2P05538 268 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 RHOXF2BP0C7M4 288 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 CD68P34810 354 aaPredicted RBP19.54■□□□□ 0.72
PSPC1-203ENST00000471658 GRIA2P42262 883 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 RENBPP51606 427 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 MAXP61244 160 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 PTPRNQ16849 979 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 MAATS1Q7Z4T9 603 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 RALGPS2Q86X27 583 aaPredicted RBP19.54■□□□□ 0.72
PSPC1-203ENST00000471658 ATP11CQ8NB49 1132 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 TSEN2Q8NCE0 465 aaKnown RBP19.54■□□□□ 0.72
PSPC1-203ENST00000471658 NSMCE1Q8WV22 266 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 TEKT5Q96M29 485 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 SPATA13Q96N96 652 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 NECAB3Q96P71 396 aaPredicted RBP19.54■□□□□ 0.72
PSPC1-203ENST00000471658 RHOXF2Q9BQY4 288 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 TRIM31Q9BZY9 425 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 KLHL8Q9P2G9 620 aaPredicted RBP19.54■□□□□ 0.72
PSPC1-203ENST00000471658 DMGDHQ9UI17 866 aaKnown RBP19.54■□□□□ 0.72
PSPC1-203ENST00000471658 CA14Q9ULX7 337 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 TTLL3Q9Y4R7 772 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 KIAA1549LQ6ZVL6 1849 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 MTSS1O43312 755 aa19.53■□□□□ 0.72
PSPC1-203ENST00000471658 GJB3O75712 270 aa19.53■□□□□ 0.72
PSPC1-203ENST00000471658 METTL18O95568 372 aa19.53■□□□□ 0.72
PSPC1-203ENST00000471658 SRCP12931 536 aa19.53■□□□□ 0.72
PSPC1-203ENST00000471658 MMP13P45452 471 aa19.53■□□□□ 0.72
PSPC1-203ENST00000471658 RGRP47804 291 aa19.53■□□□□ 0.72
PSPC1-203ENST00000471658 SERPINH1P50454 418 aaKnown RBP19.53■□□□□ 0.72
PSPC1-203ENST00000471658 PTK6Q13882 451 aa19.53■□□□□ 0.72
PSPC1-203ENST00000471658 FAXCQ5TGI0 409 aa19.53■□□□□ 0.72
PSPC1-203ENST00000471658 MYO19Q96H55 970 aa19.53■□□□□ 0.72
PSPC1-203ENST00000471658 SLC25A13Q9UJS0 675 aa19.53■□□□□ 0.72
PSPC1-203ENST00000471658 FAM187AA6NFU0 413 aa19.52■□□□□ 0.72
PSPC1-203ENST00000471658 K7EQS6 105 aa19.52■□□□□ 0.72
PSPC1-203ENST00000471658 GAS8O95995 478 aa19.52■□□□□ 0.72
PSPC1-203ENST00000471658 DLDP09622 509 aaKnown RBP19.52■□□□□ 0.72
PSPC1-203ENST00000471658 SULT2A1Q06520 285 aa19.52■□□□□ 0.72
PSPC1-203ENST00000471658 NAA30Q147X3 362 aaPredicted RBP19.52■□□□□ 0.72
PSPC1-203ENST00000471658 TRADDQ15628 312 aa19.52■□□□□ 0.72
PSPC1-203ENST00000471658 P3H1Q32P28 736 aa19.52■□□□□ 0.72
PSPC1-203ENST00000471658 INO80DQ53TQ3 878 aaPredicted RBP19.52■□□□□ 0.72
PSPC1-203ENST00000471658 DGKKQ5KSL6 1271 aa19.52■□□□□ 0.72
PSPC1-203ENST00000471658 FSTL4Q6MZW2 842 aa19.52■□□□□ 0.72
PSPC1-203ENST00000471658 TPRG1Q6ZUI0 275 aa19.52■□□□□ 0.72
PSPC1-203ENST00000471658 SH2D3CQ8N5H7 860 aa19.52■□□□□ 0.72
PSPC1-203ENST00000471658 EXOC2Q96KP1 924 aa19.52■□□□□ 0.72
PSPC1-203ENST00000471658 FERMT1Q9BQL6 677 aa19.52■□□□□ 0.72
PSPC1-203ENST00000471658 MTG2Q9H4K7 406 aa19.52■□□□□ 0.72
PSPC1-203ENST00000471658 PCDH9Q9HC56 1237 aa19.52■□□□□ 0.72
PSPC1-203ENST00000471658 HS3ST2Q9Y278 367 aa19.52■□□□□ 0.72
PSPC1-203ENST00000471658 ATP8A1Q9Y2Q0 1164 aa19.52■□□□□ 0.72
PSPC1-203ENST00000471658 EFCAB8A8MWE9 144 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 ZNF821O75541 412 aaPredicted RBP19.51■□□□□ 0.71
PSPC1-203ENST00000471658 NEBLO76041 1014 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 STK10O94804 968 aaKnown RBP19.51■□□□□ 0.71
PSPC1-203ENST00000471658 EGFP01133 1207 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 NFKB1P19838 968 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 SLC20A2Q08357 652 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 ITKQ08881 620 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 GPS1Q13098 491 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 ZNF235Q14590 738 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 RFTN1Q14699 578 aaPredicted RBP19.51■□□□□ 0.71
PSPC1-203ENST00000471658 NSMCE3Q96MG7 304 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 CINPQ9BW66 212 aaPredicted RBP19.51■□□□□ 0.71
PSPC1-203ENST00000471658 TNKS2Q9H2K2 1166 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 GLOD4Q9HC38 313 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 LHX3Q9UBR4 397 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 SEPT3Q9UH03 358 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 ASIC3Q9UHC3 531 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 TRHDEQ9UKU6 1024 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 TTC34A8MYJ7 566 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 HEXIM1O94992 359 aaKnown RBP19.51■□□□□ 0.71
PSPC1-203ENST00000471658 ASLP04424 464 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 ATP5BP06576 529 aaKnown RBP19.51■□□□□ 0.71
PSPC1-203ENST00000471658 PSMB4P28070 264 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 SEC13P55735 322 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 NIPAL4Q0D2K0 466 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 IHHQ14623 411 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 DLG2Q15700 870 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 MLF2Q15773 248 aaPredicted RBP19.51■□□□□ 0.71
PSPC1-203ENST00000471658 ACCSLQ4AC99 568 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 TMEM196Q5HYL7 178 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 SYCP2LQ5T4T6 812 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 EGFLAMQ63HQ2 1017 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 ARHGEF18Q6ZSZ5 1173 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 SYDE1Q6ZW31 735 aaPredicted RBP19.51■□□□□ 0.71
PSPC1-203ENST00000471658 GJD3Q8N144 294 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms