RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 CHRNA3P32297 505 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 GRK6P43250 576 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 RECQLP46063 649 aaPredicted RBP13.8□□□□□ -0.2
HMGN1-211ENST00000471260 MAPKAPK2P49137 400 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 NUMBP49757 651 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 FANCCQ00597 558 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 GNA12Q03113 381 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 C1QBPQ07021 282 aaKnown RBP13.8□□□□□ -0.2
HMGN1-211ENST00000471260 OVGP1Q12889 678 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 INAVAQ3KP66 663 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 MANEALQ5VSG8 457 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 AGBL4Q5VU57 503 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 RAB44Q7Z6P3 723 aaPredicted RBP13.8□□□□□ -0.2
HMGN1-211ENST00000471260 TFAP2DQ7Z6R9 452 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 IQCHQ86VS3 1027 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 TRIM69Q86WT6 500 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 KDF1Q8NAX2 398 aaPredicted RBP13.8□□□□□ -0.2
HMGN1-211ENST00000471260 OR2A12Q8NGT7 310 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 KIF18AQ8NI77 898 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 BAHD1Q8TBE0 780 aaPredicted RBP13.8□□□□□ -0.2
HMGN1-211ENST00000471260 RHBDD1Q8TEB9 315 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 NTAN1Q96AB6 310 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 SLC6A18Q96N87 628 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 PCDHB18PQ96TA0 734 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 TMEM121BQ9BXQ6 578 aaPredicted RBP13.8□□□□□ -0.2
HMGN1-211ENST00000471260 EBF2Q9HAK2 575 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 PREBQ9HCU5 417 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 TMPRSS4Q9NRS4 437 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 IFNKQ9P0W0 207 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 SNX10Q9Y5X0 201 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 EPG5Q9HCE0 2579 aa13.8□□□□□ -0.2
HMGN1-211ENST00000471260 MAP1BP46821 2468 aaKnown RBP13.79□□□□□ -0.2
HMGN1-211ENST00000471260 A0A1B0GTQ1 180 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 A0A1W2PR77 199 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 ANKRD62A6NC57 917 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 H0Y8X5 98 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 SNAP91O60641 907 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 RNGTTO60942 597 aaKnown RBP13.79□□□□□ -0.2
HMGN1-211ENST00000471260 ZMPSTE24O75844 475 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 TOP3BO95985 862 aaKnown RBP13.79□□□□□ -0.2
HMGN1-211ENST00000471260 FTH1P19P0C7X4 201 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 AIF1P55008 147 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 GEMIN4P57678 1058 aaKnown RBP13.79□□□□□ -0.2
HMGN1-211ENST00000471260 CNTN1Q12860 1018 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 CDO1Q16878 200 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 C15orf59Q2T9L4 293 aaPredicted RBP13.79□□□□□ -0.2
HMGN1-211ENST00000471260 NAPEPLDQ6IQ20 393 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 C22orf39Q6P5X5 142 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 MON1BQ7L1V2 547 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 PLPP6Q8IY26 295 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 OXR1Q8N573 874 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 PCDH20Q8N6Y1 951 aaKnown RBP13.79□□□□□ -0.2
HMGN1-211ENST00000471260 MFSD2AQ8NA29 543 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 JOSD2Q8TAC2 188 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 GATA6Q92908 595 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 VCPIP1Q96JH7 1222 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 SERAC1Q96JX3 654 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 ELF4Q99607 663 aaPredicted RBP13.79□□□□□ -0.2
HMGN1-211ENST00000471260 AGPAT1Q99943 283 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 ERVMER34-1Q9H9K5 563 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 ATP13A1Q9HD20 1204 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 DYRK4Q9NR20 520 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 GDF3Q9NR23 364 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 AASDHPPTQ9NRN7 309 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 ARHGAP20Q9P2F6 1191 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 CHD8Q9HCK8 2581 aa13.79□□□□□ -0.2
HMGN1-211ENST00000471260 FAM170AA1A519 330 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 C1QTNF9BB2RNN3 333 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 K7ERQ8 282 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 TLR4O00206 839 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 CBX4O00257 560 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 BNIP3LO60238 219 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 RTN2O75298 545 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 CTSLP07711 333 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 C1QTNF9P0C862 333 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 RHOQP17081 205 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 DESP17661 470 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 SPINK2P20155 84 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 GPD1P21695 349 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 RRM1P23921 792 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 RFC1P35251 1148 aaPredicted RBP13.78□□□□□ -0.2
HMGN1-211ENST00000471260 SERPINH1P50454 418 aaKnown RBP13.78□□□□□ -0.2
HMGN1-211ENST00000471260 METAP1P53582 386 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 HDAC4P56524 1084 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 SCAPQ12770 1279 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 FILIP1LQ4L180 1135 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 SETMARQ53H47 684 aaPredicted RBP13.78□□□□□ -0.2
HMGN1-211ENST00000471260 KCNT1Q5JUK3 1230 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 WDR59Q6PJI9 974 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 TMC6Q7Z403 805 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 NLRP14Q86W24 1093 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 OR7D4Q8NG98 312 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 FAM172AQ8WUF8 416 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 ISG20Q96AZ6 181 aaKnown RBP13.78□□□□□ -0.2
HMGN1-211ENST00000471260 PPP1R16AQ96I34 528 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 SPON2Q9BUD6 331 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 HDAC8Q9BY41 377 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 MAGEH1Q9H213 219 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 SEPT11Q9NVA2 429 aaKnown RBP13.78□□□□□ -0.2
HMGN1-211ENST00000471260 TMEM248Q9NWD8 314 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms