RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 CCAR2Q8N163 923 aaKnown RBP12.29□□□□□ -0.44
LSM2-209ENST00000470083 ARL10Q8N8L6 244 aa12.29□□□□□ -0.44
LSM2-209ENST00000470083 IQUBQ8NA54 791 aa12.29□□□□□ -0.44
LSM2-209ENST00000470083 TMIEQ8NEW7 156 aa12.29□□□□□ -0.44
LSM2-209ENST00000470083 DQX1Q8TE96 717 aaKnown RBP12.29□□□□□ -0.44
LSM2-209ENST00000470083 HDAC8Q9BY41 377 aa12.29□□□□□ -0.44
LSM2-209ENST00000470083 SLC17A9Q9BYT1 436 aa12.29□□□□□ -0.44
LSM2-209ENST00000470083 KCTD10Q9H3F6 313 aa12.29□□□□□ -0.44
LSM2-209ENST00000470083 DYRK4Q9NR20 520 aa12.29□□□□□ -0.44
LSM2-209ENST00000470083 TMPRSS4Q9NRS4 437 aa12.29□□□□□ -0.44
LSM2-209ENST00000470083 APOBEC3BQ9UH17 382 aaKnown RBP12.29□□□□□ -0.44
LSM2-209ENST00000470083 RABGEF1Q9UJ41 708 aa12.29□□□□□ -0.44
LSM2-209ENST00000470083 FARP1Q9Y4F1 1045 aaPredicted RBP12.29□□□□□ -0.44
LSM2-209ENST00000470083 NYNRINQ9P2P1 1898 aaKnown RBP12.28□□□□□ -0.44
LSM2-209ENST00000470083 A0A1W2PQM1 296 aa12.28□□□□□ -0.44
LSM2-209ENST00000470083 VPS37CA5D8V6 355 aaPredicted RBP12.28□□□□□ -0.44
LSM2-209ENST00000470083 C9orf172C9J069 976 aa12.28□□□□□ -0.44
LSM2-209ENST00000470083 MAPK13O15264 365 aa12.28□□□□□ -0.44
LSM2-209ENST00000470083 PAK4O96013 591 aaPredicted RBP12.28□□□□□ -0.44
LSM2-209ENST00000470083 RPLP0P05388 317 aaKnown RBP12.28□□□□□ -0.44
LSM2-209ENST00000470083 TACR2P21452 398 aa12.28□□□□□ -0.44
LSM2-209ENST00000470083 CASP1P29466 404 aa12.28□□□□□ -0.44
LSM2-209ENST00000470083 CHRNA3P32297 505 aa12.28□□□□□ -0.44
LSM2-209ENST00000470083 NOS2P35228 1153 aa12.28□□□□□ -0.44
LSM2-209ENST00000470083 CCL7P80098 99 aa12.28□□□□□ -0.44
LSM2-209ENST00000470083 NUCB2P80303 420 aa12.28□□□□□ -0.44
LSM2-209ENST00000470083 C1orf61Q13536 156 aa12.28□□□□□ -0.44
LSM2-209ENST00000470083 TTC39BQ5VTQ0 682 aaPredicted RBP12.28□□□□□ -0.44
LSM2-209ENST00000470083 RAP1GAP2Q684P5 730 aa12.28□□□□□ -0.44
LSM2-209ENST00000470083 KIAA1161Q6NSJ0 714 aa12.28□□□□□ -0.44
LSM2-209ENST00000470083 SDR16C5Q8N3Y7 309 aa12.28□□□□□ -0.44
LSM2-209ENST00000470083 SH2D3CQ8N5H7 860 aa12.28□□□□□ -0.44
LSM2-209ENST00000470083 C9orf43Q8TAL5 461 aaPredicted RBP12.28□□□□□ -0.44
LSM2-209ENST00000470083 UBA3Q8TBC4 463 aa12.28□□□□□ -0.44
LSM2-209ENST00000470083 USP7Q93009 1102 aa12.28□□□□□ -0.44
LSM2-209ENST00000470083 RNF34Q969K3 372 aa12.28□□□□□ -0.44
LSM2-209ENST00000470083 CCDC74AQ96AQ1 378 aa12.28□□□□□ -0.44
LSM2-209ENST00000470083 ALG14Q96F25 216 aa12.28□□□□□ -0.44
LSM2-209ENST00000470083 PPP1R9BQ96SB3 815 aa12.28□□□□□ -0.44
LSM2-209ENST00000470083 LRRC61Q9BV99 259 aa12.28□□□□□ -0.44
LSM2-209ENST00000470083 B3GNT4Q9C0J1 378 aa12.28□□□□□ -0.44
LSM2-209ENST00000470083 BLZF1Q9H2G9 400 aa12.28□□□□□ -0.44
LSM2-209ENST00000470083 TCEAL2Q9H3H9 227 aaPredicted RBP12.28□□□□□ -0.44
LSM2-209ENST00000470083 MAGEF1Q9HAY2 307 aa12.28□□□□□ -0.44
LSM2-209ENST00000470083 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.28□□□□□ -0.44
LSM2-209ENST00000470083 RP1L1Q8IWN7 2480 aaPredicted RBP12.27□□□□□ -0.45
LSM2-209ENST00000470083 TCAF2A6NFQ2 919 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 F5H5T6 163 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 O00370 1275 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 PDXKO00764 312 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 FPGTO14772 594 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 SPTLC2O15270 562 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 YY2O15391 372 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 GABBR2O75899 941 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 APOEP02649 317 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 PRNPP04156 253 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 ETV5P41161 510 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 PFN3P60673 137 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 ENPEPQ07075 957 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 ZFP36L1Q07352 338 aaKnown RBP12.27□□□□□ -0.45
LSM2-209ENST00000470083 FAM173BQ6P4H8 233 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 INTS8Q75QN2 995 aaKnown RBP12.27□□□□□ -0.45
LSM2-209ENST00000470083 ZSCAN30Q86W11 494 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 CIR1Q86X95 450 aaPredicted RBP12.27□□□□□ -0.45
LSM2-209ENST00000470083 PHACTR4Q8IZ21 702 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 KYQ8NBH2 561 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 OR2A12Q8NGT7 310 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 SEMA4DQ92854 862 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 BTN2A3PQ96KV6 586 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 CCDC114Q96M63 670 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 CATSPER2Q96P56 530 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 LENG8Q96PV6 779 aaPredicted RBP12.27□□□□□ -0.45
LSM2-209ENST00000470083 USP28Q96RU2 1077 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 KLF6Q99612 283 aaPredicted RBP12.27□□□□□ -0.45
LSM2-209ENST00000470083 CMKLR1Q99788 373 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 FEM1AQ9BSK4 669 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 CPEB1Q9BZB8 566 aaKnown RBP12.27□□□□□ -0.45
LSM2-209ENST00000470083 TMEM8AQ9HCN3 771 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 ZNF71Q9NQZ8 489 aaPredicted RBP12.27□□□□□ -0.45
LSM2-209ENST00000470083 NAALADL1Q9UQQ1 740 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 HS3ST2Q9Y278 367 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 CELSR2Q9HCU4 2923 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 CSMD1Q96PZ7 3565 aa12.27□□□□□ -0.45
LSM2-209ENST00000470083 STMND1H3BQB6 276 aa12.26□□□□□ -0.45
LSM2-209ENST00000470083 AGFG2O95081 481 aa12.26□□□□□ -0.45
LSM2-209ENST00000470083 FYNP06241 537 aa12.26□□□□□ -0.45
LSM2-209ENST00000470083 CD19P15391 556 aa12.26□□□□□ -0.45
LSM2-209ENST00000470083 TSHRP16473 764 aa12.26□□□□□ -0.45
LSM2-209ENST00000470083 RGS7P49802 495 aa12.26□□□□□ -0.45
LSM2-209ENST00000470083 RABEP1Q15276 862 aa12.26□□□□□ -0.45
LSM2-209ENST00000470083 KRT39Q6A163 491 aa12.26□□□□□ -0.45
LSM2-209ENST00000470083 PMF1Q6P1K2 205 aa12.26□□□□□ -0.45
LSM2-209ENST00000470083 TAC4Q86UU9 113 aa12.26□□□□□ -0.45
LSM2-209ENST00000470083 KIAA0895Q8NCT3 520 aa12.26□□□□□ -0.45
LSM2-209ENST00000470083 CLEC4CQ8WTT0 213 aa12.26□□□□□ -0.45
LSM2-209ENST00000470083 SLC35F5Q8WV83 523 aa12.26□□□□□ -0.45
LSM2-209ENST00000470083 PPP1R16AQ96I34 528 aa12.26□□□□□ -0.45
LSM2-209ENST00000470083 FEM1CQ96JP0 617 aa12.26□□□□□ -0.45
LSM2-209ENST00000470083 EPAS1Q99814 870 aa12.26□□□□□ -0.45
LSM2-209ENST00000470083 SLC13A1Q9BZW2 595 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms