RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 HORMAD1Q86X24 394 aa17.87■□□□□ 0.45
COL7A1-208ENST00000470076 FAM131BQ86XD5 332 aa17.87■□□□□ 0.45
COL7A1-208ENST00000470076 CHST14Q8NCH0 376 aa17.87■□□□□ 0.45
COL7A1-208ENST00000470076 OR7D4Q8NG98 312 aa17.87■□□□□ 0.45
COL7A1-208ENST00000470076 CPA5Q8WXQ8 436 aa17.87■□□□□ 0.45
COL7A1-208ENST00000470076 ARRDC3Q96B67 414 aa17.87■□□□□ 0.45
COL7A1-208ENST00000470076 SPON2Q9BUD6 331 aa17.87■□□□□ 0.45
COL7A1-208ENST00000470076 HDAC8Q9BY41 377 aa17.87■□□□□ 0.45
COL7A1-208ENST00000470076 CEP44Q9C0F1 390 aa17.87■□□□□ 0.45
COL7A1-208ENST00000470076 ZNF212Q9UDV6 495 aa17.87■□□□□ 0.45
COL7A1-208ENST00000470076 IL36AQ9UHA7 158 aa17.87■□□□□ 0.45
COL7A1-208ENST00000470076 TRPM6Q9BX84 2022 aa17.86■□□□□ 0.45
COL7A1-208ENST00000470076 FAM170AA1A519 330 aa17.86■□□□□ 0.45
COL7A1-208ENST00000470076 ENDOD1O94919 500 aa17.86■□□□□ 0.45
COL7A1-208ENST00000470076 THEGLP0DJG4 465 aa17.86■□□□□ 0.45
COL7A1-208ENST00000470076 PRLRP16471 622 aa17.86■□□□□ 0.45
COL7A1-208ENST00000470076 CKMT2P17540 419 aa17.86■□□□□ 0.45
COL7A1-208ENST00000470076 GLDCP23378 1020 aa17.86■□□□□ 0.45
COL7A1-208ENST00000470076 AKT2P31751 481 aa17.86■□□□□ 0.45
COL7A1-208ENST00000470076 SERPINH1P50454 418 aaKnown RBP17.86■□□□□ 0.45
COL7A1-208ENST00000470076 ZNF284Q2VY69 593 aa17.86■□□□□ 0.45
COL7A1-208ENST00000470076 ARSIQ5FYB1 569 aa17.86■□□□□ 0.45
COL7A1-208ENST00000470076 DPY19L3Q6ZPD9 716 aa17.86■□□□□ 0.45
COL7A1-208ENST00000470076 PCDH20Q8N6Y1 951 aaKnown RBP17.86■□□□□ 0.45
COL7A1-208ENST00000470076 GRIN3AQ8TCU5 1115 aa17.86■□□□□ 0.45
COL7A1-208ENST00000470076 NXPE2Q96DL1 559 aa17.86■□□□□ 0.45
COL7A1-208ENST00000470076 TNKS2Q9H2K2 1166 aa17.86■□□□□ 0.45
COL7A1-208ENST00000470076 ATP13A1Q9HD20 1204 aa17.86■□□□□ 0.45
COL7A1-208ENST00000470076 PPARGC1AQ9UBK2 798 aaKnown RBP17.86■□□□□ 0.45
COL7A1-208ENST00000470076 CA5BQ9Y2D0 317 aa17.86■□□□□ 0.45
COL7A1-208ENST00000470076 FASNP49327 2511 aaKnown RBP17.86■□□□□ 0.45
COL7A1-208ENST00000470076 CXorf51AA0A1B0GTR3 108 aa17.85■□□□□ 0.45
COL7A1-208ENST00000470076 LEFTY1O75610 366 aa17.85■□□□□ 0.45
COL7A1-208ENST00000470076 ZMPSTE24O75844 475 aa17.85■□□□□ 0.45
COL7A1-208ENST00000470076 PCDH8O95206 1070 aa17.85■□□□□ 0.45
COL7A1-208ENST00000470076 HOXB3P14651 431 aaPredicted RBP17.85■□□□□ 0.45
COL7A1-208ENST00000470076 HNRNPA2B1P22626 353 aaKnown RBP17.85■□□□□ 0.45
COL7A1-208ENST00000470076 ETFBP38117 255 aa17.85■□□□□ 0.45
COL7A1-208ENST00000470076 GNA12Q03113 381 aa17.85■□□□□ 0.45
COL7A1-208ENST00000470076 ARL13BQ3SXY8 428 aa17.85■□□□□ 0.45
COL7A1-208ENST00000470076 FBXL19Q6PCT2 694 aa17.85■□□□□ 0.45
COL7A1-208ENST00000470076 PDZD3Q86UT5 571 aa17.85■□□□□ 0.45
COL7A1-208ENST00000470076 FAM174AQ8TBP5 190 aa17.85■□□□□ 0.45
COL7A1-208ENST00000470076 HNRNPLLQ8WVV9 542 aaKnown RBP17.85■□□□□ 0.45
COL7A1-208ENST00000470076 KLK6Q92876 244 aa17.85■□□□□ 0.45
COL7A1-208ENST00000470076 GANQ9H2C0 597 aa17.85■□□□□ 0.45
COL7A1-208ENST00000470076 RETREG1Q9H6L5 497 aa17.85■□□□□ 0.45
COL7A1-208ENST00000470076 METTL5Q9NRN9 209 aaKnown RBP17.85■□□□□ 0.45
COL7A1-208ENST00000470076 KLHL11Q9NVR0 708 aa17.85■□□□□ 0.45
COL7A1-208ENST00000470076 TAB2Q9NYJ8 693 aa17.85■□□□□ 0.45
COL7A1-208ENST00000470076 NOCTQ9UK39 431 aaKnown RBP17.85■□□□□ 0.45
COL7A1-208ENST00000470076 WASF2Q9Y6W5 498 aa17.85■□□□□ 0.45
COL7A1-208ENST00000470076 TDRD6O60522 2096 aaKnown RBP17.84■□□□□ 0.45
COL7A1-208ENST00000470076 CHD5Q8TDI0 1954 aa17.84■□□□□ 0.45
COL7A1-208ENST00000470076 MYLKQ15746 1914 aa17.84■□□□□ 0.45
COL7A1-208ENST00000470076 A0A087WV48 116 aa17.84■□□□□ 0.45
COL7A1-208ENST00000470076 SDC3O75056 442 aa17.84■□□□□ 0.45
COL7A1-208ENST00000470076 ZNF821O75541 412 aaPredicted RBP17.84■□□□□ 0.45
COL7A1-208ENST00000470076 GFPT2O94808 682 aa17.84■□□□□ 0.45
COL7A1-208ENST00000470076 CYP1A1P04798 512 aaPredicted RBP17.84■□□□□ 0.45
COL7A1-208ENST00000470076 MMP8P22894 467 aa17.84■□□□□ 0.45
COL7A1-208ENST00000470076 NEK3P51956 506 aa17.84■□□□□ 0.45
COL7A1-208ENST00000470076 ARF5P84085 180 aa17.84■□□□□ 0.45
COL7A1-208ENST00000470076 ATP11AP98196 1134 aa17.84■□□□□ 0.45
COL7A1-208ENST00000470076 CDR2Q01850 454 aa17.84■□□□□ 0.45
COL7A1-208ENST00000470076 NRG1Q02297 640 aaPredicted RBP17.84■□□□□ 0.45
COL7A1-208ENST00000470076 ZNF211Q13398 564 aaPredicted RBP17.84■□□□□ 0.45
COL7A1-208ENST00000470076 PROX2Q3B8N5 592 aa17.84■□□□□ 0.45
COL7A1-208ENST00000470076 HES3Q5TGS1 186 aa17.84■□□□□ 0.45
COL7A1-208ENST00000470076 DRC7Q8IY82 874 aa17.84■□□□□ 0.45
COL7A1-208ENST00000470076 EMC1Q8N766 993 aa17.84■□□□□ 0.45
COL7A1-208ENST00000470076 ENOX1Q8TC92 643 aaKnown RBP17.84■□□□□ 0.45
COL7A1-208ENST00000470076 MYOCQ99972 504 aa17.84■□□□□ 0.45
COL7A1-208ENST00000470076 HEPHQ9BQS7 1158 aa17.84■□□□□ 0.45
COL7A1-208ENST00000470076 OR12D3Q9UGF7 316 aa17.84■□□□□ 0.45
COL7A1-208ENST00000470076 DAAM1Q9Y4D1 1078 aa17.84■□□□□ 0.45
COL7A1-208ENST00000470076 LOC400499M0QZD8 3231 aa17.84■□□□□ 0.45
COL7A1-208ENST00000470076 RNF103O00237 685 aa17.83■□□□□ 0.44
COL7A1-208ENST00000470076 TPM2P07951 284 aa17.83■□□□□ 0.44
COL7A1-208ENST00000470076 ACP1P24666 158 aa17.83■□□□□ 0.44
COL7A1-208ENST00000470076 ITGB7P26010 798 aa17.83■□□□□ 0.44
COL7A1-208ENST00000470076 SDC4P31431 198 aa17.83■□□□□ 0.44
COL7A1-208ENST00000470076 ADRA1BP35368 520 aa17.83■□□□□ 0.44
COL7A1-208ENST00000470076 CLDN6P56747 220 aa17.83■□□□□ 0.44
COL7A1-208ENST00000470076 TARDBPQ13148 414 aaKnown RBP eCLIP17.83■□□□□ 0.44
COL7A1-208ENST00000470076 TMEM259Q4ZIN3 620 aa17.83■□□□□ 0.44
COL7A1-208ENST00000470076 HS1BP3Q53T59 392 aa17.83■□□□□ 0.44
COL7A1-208ENST00000470076 CARD16Q5EG05 197 aa17.83■□□□□ 0.44
COL7A1-208ENST00000470076 KIAA1161Q6NSJ0 714 aa17.83■□□□□ 0.44
COL7A1-208ENST00000470076 TRIM72Q6ZMU5 477 aa17.83■□□□□ 0.44
COL7A1-208ENST00000470076 ABI3BPQ7Z7G0 1075 aa17.83■□□□□ 0.44
COL7A1-208ENST00000470076 PLPP6Q8IY26 295 aa17.83■□□□□ 0.44
COL7A1-208ENST00000470076 CACTIN-AS1Q8N1I8 211 aa17.83■□□□□ 0.44
COL7A1-208ENST00000470076 SLC25A45Q8N413 288 aa17.83■□□□□ 0.44
COL7A1-208ENST00000470076 OR13H1Q8NG92 308 aa17.83■□□□□ 0.44
COL7A1-208ENST00000470076 SLC20A1Q8WUM9 679 aa17.83■□□□□ 0.44
COL7A1-208ENST00000470076 RXFP2Q8WXD0 754 aa17.83■□□□□ 0.44
COL7A1-208ENST00000470076 ISG20Q96AZ6 181 aaKnown RBP17.83■□□□□ 0.44
COL7A1-208ENST00000470076 IFT43Q96FT9 208 aa17.83■□□□□ 0.44
COL7A1-208ENST00000470076 CALN1Q9BXU9 219 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms