RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 TCEA3O75764 348 aa13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 PRNPP04156 253 aa13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 SRSF1Q07955 248 aaKnown RBP eCLIP13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 MAPK8IP2Q13387 824 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 FGL2Q14314 439 aa13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 DEFB133Q30KQ1 61 aa13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 KYAT3Q6YP21 454 aaKnown RBP13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 TMEM110Q86TL2 294 aa13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 PARGQ86W56 976 aa13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 CHST14Q8NCH0 376 aa13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 WDR36Q8NI36 951 aaKnown RBP13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 LMO3Q8TAP4 145 aa13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 CCDC114Q96M63 670 aa13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 CCNL2Q96S94 520 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 HDAC8Q9BY41 377 aa13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 SLC17A9Q9BYT1 436 aa13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 MUC3BQ9H195 1237 aa13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 THAP9Q9H5L6 903 aa13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 METTL14Q9HCE5 456 aaKnown RBP13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 DDIT4Q9NX09 232 aa13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 COX16Q9P0S2 106 aa13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 SALL4Q9UJQ4 1053 aa13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 TBC1D30Q9Y2I9 924 aa13.12□□□□□ -0.31
TRAPPC12-216ENST00000469400 AHCTF1Q8WYP5 2266 aa13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 H3BM21 787 aa13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 RIOK3O14730 519 aaKnown RBP13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 MUSKO15146 869 aa13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 AQP9O43315 295 aa13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 SMAD6O43541 496 aaKnown RBP13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 CLDN11O75508 207 aa13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 ZNF202O95125 648 aa13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 PAK4O96013 591 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 RRM1P23921 792 aa13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 GGCXP38435 758 aa13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 MLLT3P42568 568 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 RPS21P63220 83 aaKnown RBP13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 KRT83P78385 493 aa13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 CDK17Q00537 523 aa13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 DRAP1Q14919 205 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 NR0B2Q15466 257 aa13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 LINC00303Q3SY05 128 aa13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 ARSIQ5FYB1 569 aa13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 PERM1Q5SV97 790 aa13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 C14orf80Q86SX3 495 aa13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 ARHGEF19Q8IW93 802 aa13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 DEFB106AQ8N104 65 aa13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 GRIN3AQ8TCU5 1115 aa13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 LMX1AQ8TE12 382 aa13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 PSMB7Q99436 277 aa13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 GOLPH3LQ9H4A5 285 aa13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 IL36AQ9UHA7 158 aa13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 IPO11Q9UI26 975 aaKnown RBP13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 VPS51Q9UID3 782 aa13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 ATXN7L1Q9ULK2 861 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 HS3ST4Q9Y661 456 aa13.11□□□□□ -0.31
TRAPPC12-216ENST00000469400 COL27A1Q8IZC6 1860 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 RP1P56715 2156 aa13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 TRIM49BA6NDI0 452 aa13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 TERTO14746 1132 aaKnown RBP13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 TPP1O14773 563 aa13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 SPINT1O43278 529 aa13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 LEFTY1O75610 366 aa13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 HSP90AA1P07900 732 aaKnown RBP13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 ITGA2BP08514 1039 aa13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 JUNDP17535 347 aa13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 RABIFP47224 123 aa13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 PDX1P52945 283 aa13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 CDH4P55283 916 aa13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 GCNT1Q02742 428 aa13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 PDE1CQ14123 709 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 TPRG1LQ5T0D9 272 aa13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 C6orf132Q5T0Z8 1188 aa13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 KIAA1161Q6NSJ0 714 aa13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 LINGO4Q6UY18 593 aa13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 SNX21Q969T3 373 aa13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 FEM1CQ96JP0 617 aa13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 KREMEN1Q96MU8 473 aa13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 SLC2A13Q96QE2 648 aa13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 IL12RB2Q99665 862 aa13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 C2orf49Q9BVC5 232 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 BOCQ9BWV1 1114 aa13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 TNKS2Q9H2K2 1166 aa13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 WDR70Q9NW82 654 aa13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 CNTN6Q9UQ52 1028 aa13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 TLN1Q9Y490 2541 aaKnown RBP13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 KIF26BQ2KJY2 2108 aa13.1□□□□□ -0.31
TRAPPC12-216ENST00000469400 CCDC187A0A096LP49 1063 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 PAGE1O75459 146 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 CNTN5O94779 1100 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 ENDOD1O94919 500 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 GJB6O95452 261 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 KRT5P13647 590 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 ADRB3P13945 408 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 RPIAP49247 311 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 CLCN6P51797 869 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 NEK3P51956 506 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 KRT85P78386 507 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 NFKB2Q00653 900 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 LRRC63Q05C16 580 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms