RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 TK2O00142 265 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 PDGFRBP09619 1106 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 COL6A2P12110 1019 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 BMP2P12643 396 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 NAGLUP54802 743 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 EEF1DP3Q658K8 133 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 ITPRIPL1Q6GPH6 555 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 SCUBE3Q8IX30 993 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 PELI3Q8N2H9 469 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 MFSD2AQ8NA29 543 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 FAM47BQ8NA70 645 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 DNERQ8NFT8 737 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 STYXQ8WUJ0 223 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 SLCO4A1Q96BD0 722 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 VPS39Q96JC1 886 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 DOK1Q99704 481 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 SLC29A1Q99808 456 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 CIB1Q99828 191 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 SPAG4Q9NPE6 437 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 DUS2Q9NX74 493 aaKnown RBP20.03■□□□□ 0.8
SDF4-205ENST00000465727 EBF1Q9UH73 591 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 ADAMTS5Q9UNA0 930 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 MAGEB16A2A368 324 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 FARP2O94887 1054 aaPredicted RBP20.03■□□□□ 0.8
SDF4-205ENST00000465727 GLRA4Q5JXX5 417 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 SLC26A9Q7LBE3 791 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 PSTKQ8IV42 348 aaKnown RBP20.03■□□□□ 0.8
SDF4-205ENST00000465727 ANKRD52Q8NB46 1076 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 GRIN3AQ8TCU5 1115 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 SLC35F5Q8WV83 523 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 LPGAT1Q92604 370 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 AGAP2Q99490 1192 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 C1QTNF1Q9BXJ1 281 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 PALMDQ9NP74 551 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 VANGL2Q9ULK5 521 aa20.03■□□□□ 0.8
SDF4-205ENST00000465727 IGKV6-21A0A0C4DH24 114 aa20.02■□□□□ 0.8
SDF4-205ENST00000465727 E7ENX8 843 aa20.02■□□□□ 0.8
SDF4-205ENST00000465727 BOLA2-SMG1P6H3BVE0 249 aa20.02■□□□□ 0.8
SDF4-205ENST00000465727 PSMD12O00232 456 aaPredicted RBP20.02■□□□□ 0.8
SDF4-205ENST00000465727 MFSD11O43934 449 aa20.02■□□□□ 0.8
SDF4-205ENST00000465727 STAMBPO95630 424 aa20.02■□□□□ 0.8
SDF4-205ENST00000465727 GOT1P17174 413 aa20.02■□□□□ 0.8
SDF4-205ENST00000465727 SMAD1Q15797 465 aaKnown RBP20.02■□□□□ 0.8
SDF4-205ENST00000465727 TMEM192Q8IY95 271 aa20.02■□□□□ 0.8
SDF4-205ENST00000465727 LSMEM2Q8N112 164 aa20.02■□□□□ 0.8
SDF4-205ENST00000465727 GPR22Q99680 433 aa20.02■□□□□ 0.8
SDF4-205ENST00000465727 TEX13BQ9BXU2 312 aa20.02■□□□□ 0.8
SDF4-205ENST00000465727 LRRC4Q9HBW1 653 aa20.02■□□□□ 0.8
SDF4-205ENST00000465727 ARMC1Q9NVT9 282 aa20.02■□□□□ 0.8
SDF4-205ENST00000465727 INO80B-WBP1J3KQ70 363 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 NPHS1O60500 1241 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 SBK3P0C264 359 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 CYP2C8P10632 490 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 TFE3P19532 575 aaPredicted RBP20.01■□□□□ 0.79
SDF4-205ENST00000465727 UBA1P22314 1058 aaKnown RBP20.01■□□□□ 0.79
SDF4-205ENST00000465727 MYF6P23409 242 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 TNFAIP2Q03169 654 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 LRP8Q14114 963 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 PPP1R26Q5T8A7 1209 aaPredicted RBP20.01■□□□□ 0.79
SDF4-205ENST00000465727 INTS11Q5TA45 600 aaKnown RBP20.01■□□□□ 0.79
SDF4-205ENST00000465727 NCCRP1Q6ZVX7 275 aaPredicted RBP20.01■□□□□ 0.79
SDF4-205ENST00000465727 ZNF354CQ86Y25 554 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 ZNF567Q8N184 647 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 KDM1BQ8NB78 822 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 THAP11Q96EK4 314 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 TCF12Q99081 682 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 FTHL17Q9BXU8 183 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 PCDHAC1Q9H158 963 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 UPF3AQ9H1J1 476 aaKnown RBP20.01■□□□□ 0.79
SDF4-205ENST00000465727 CACNA2D2Q9NY47 1150 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 CNOT6Q9ULM6 557 aaKnown RBP20.01■□□□□ 0.79
SDF4-205ENST00000465727 LOC285556D6RIA3 1793 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 KCNU1A8MYU2 1149 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 B4GALT5O43286 388 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 RAD17O75943 681 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 AP2A1O95782 977 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 HSPA8P11142 646 aaKnown RBP20.01■□□□□ 0.79
SDF4-205ENST00000465727 CYP2C9P11712 490 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 NELFEP18615 380 aaKnown RBP20.01■□□□□ 0.79
SDF4-205ENST00000465727 FGFR3P22607 806 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 CDH15P55291 814 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 NME5P56597 212 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 ITGA7Q13683 1181 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 SAMD4BQ5PRF9 694 aaKnown RBP20.01■□□□□ 0.79
SDF4-205ENST00000465727 HMBOX1Q6NT76 420 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 TTC33Q6PID6 262 aaPredicted RBP20.01■□□□□ 0.79
SDF4-205ENST00000465727 CHSY3Q70JA7 882 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 STRADAQ7RTN6 431 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 KCNMB4Q86W47 210 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 TRIM50Q86XT4 487 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 COLGALT2Q8IYK4 626 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 DDHD1Q8NEL9 900 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 OR52K1Q8NGK4 314 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 MARK4Q96L34 752 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 NOL11Q9H8H0 719 aaKnown RBP20.01■□□□□ 0.79
SDF4-205ENST00000465727 TMEM165Q9HC07 324 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 CD300AQ9UGN4 299 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 MFHAS1Q9Y4C4 1052 aa20.01■□□□□ 0.79
SDF4-205ENST00000465727 ERI2A8K979 691 aaKnown RBP20■□□□□ 0.79
SDF4-205ENST00000465727 JUNP05412 331 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms