RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 WNT1P04628 370 aa4.45□□□□□ -1.7
CLK1-208ENST00000464454 TBXAS1P24557 533 aaPredicted RBP4.45□□□□□ -1.7
CLK1-208ENST00000464454 GJC1P36383 396 aa4.45□□□□□ -1.7
CLK1-208ENST00000464454 CDH15P55291 814 aa4.45□□□□□ -1.7
CLK1-208ENST00000464454 RHAGQ02094 409 aa4.45□□□□□ -1.7
CLK1-208ENST00000464454 LMOD3Q0VAK6 560 aa4.45□□□□□ -1.7
CLK1-208ENST00000464454 PMPCAQ10713 525 aa4.45□□□□□ -1.7
CLK1-208ENST00000464454 SMTNL2Q2TAL5 461 aa4.45□□□□□ -1.7
CLK1-208ENST00000464454 AP5B1Q2VPB7 878 aa4.45□□□□□ -1.7
CLK1-208ENST00000464454 ARL13AQ5H913 290 aaPredicted RBP4.45□□□□□ -1.7
CLK1-208ENST00000464454 PIK3CD-AS1Q5SR53 167 aa4.45□□□□□ -1.7
CLK1-208ENST00000464454 VWA5B1Q5TIE3 1220 aa4.45□□□□□ -1.7
CLK1-208ENST00000464454 GJB7Q6PEY0 223 aa4.45□□□□□ -1.7
CLK1-208ENST00000464454 SLC22A25Q6T423 547 aa4.45□□□□□ -1.7
CLK1-208ENST00000464454 DSTYKQ6XUX3 929 aa4.45□□□□□ -1.7
CLK1-208ENST00000464454 RNF144BQ7Z419 303 aa4.45□□□□□ -1.7
CLK1-208ENST00000464454 FAM185AQ8N0U4 392 aa4.45□□□□□ -1.7
CLK1-208ENST00000464454 TNIP2Q8NFZ5 429 aa4.45□□□□□ -1.7
CLK1-208ENST00000464454 TBC1D22AQ8WUA7 517 aa4.45□□□□□ -1.7
CLK1-208ENST00000464454 RUFY2Q8WXA3 655 aa4.45□□□□□ -1.7
CLK1-208ENST00000464454 NLRP4Q96MN2 994 aa4.45□□□□□ -1.7
CLK1-208ENST00000464454 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.45□□□□□ -1.7
CLK1-208ENST00000464454 FZD3Q9NPG1 666 aa4.45□□□□□ -1.7
CLK1-208ENST00000464454 RNF146Q9NTX7 359 aa4.45□□□□□ -1.7
CLK1-208ENST00000464454 BEX4Q9NWD9 120 aaPredicted RBP4.45□□□□□ -1.7
CLK1-208ENST00000464454 FBXO4Q9UKT5 387 aa4.45□□□□□ -1.7
CLK1-208ENST00000464454 PCDHA12Q9UN75 941 aa4.45□□□□□ -1.7
CLK1-208ENST00000464454 OSGIN2Q9Y236 505 aa4.45□□□□□ -1.7
CLK1-208ENST00000464454 A0A0G2JK05 382 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 IGLV5-39A0A0G2JS06 123 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.44□□□□□ -1.7
CLK1-208ENST00000464454 GAGE10A6NGK3 116 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 MYMKA6NI61 221 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 ZNF814B7Z6K7 855 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 TNPO2O14787 897 aaKnown RBP4.44□□□□□ -1.7
CLK1-208ENST00000464454 STRNO43815 780 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 HBP1O60381 514 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 NEURL1O76050 574 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 IGKV2-30P06310 120 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 FCGR2AP12318 317 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 ABCD3P28288 659 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 TYK2P29597 1187 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 MTNR1AP48039 350 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 CCT4P50991 539 aaKnown RBP4.44□□□□□ -1.7
CLK1-208ENST00000464454 CYP2J2P51589 502 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 GAD2Q05329 585 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 TDGQ13569 410 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 IL13RA2Q14627 380 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 PLK5Q496M5 336 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 C5orf22Q49AR2 442 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 FAM180BQ6P0A1 224 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 IP6K1Q92551 441 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 CNOT9Q92600 299 aaKnown RBP4.44□□□□□ -1.7
CLK1-208ENST00000464454 KAT2AQ92830 837 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.44□□□□□ -1.7
CLK1-208ENST00000464454 PDCL3Q9H2J4 239 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 AAMDCQ9H7C9 122 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 VEZTQ9HBM0 779 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 Q9N2J8 555 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 SPAG4Q9NPE6 437 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 OLA1Q9NTK5 396 aaKnown RBP4.44□□□□□ -1.7
CLK1-208ENST00000464454 HCN3Q9P1Z3 774 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 SLC25A10Q9UBX3 287 aaPredicted RBP4.44□□□□□ -1.7
CLK1-208ENST00000464454 COG5Q9UP83 839 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 DHDHQ9UQ10 334 aa4.44□□□□□ -1.7
CLK1-208ENST00000464454 TCRBV7S3A2A0A539 114 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 OR6C68A6NDL8 312 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 GAGE12JA6NER3 117 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 TEX22C9J3V5 150 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 SPTLC2O15270 562 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 RTN3O95197 1032 aaPredicted RBP4.43□□□□□ -1.7
CLK1-208ENST00000464454 TBX18O95935 607 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 F9P00740 461 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 CHRM4P08173 479 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 SCP2P22307 547 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 GGT5P36269 586 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 SKIV2L2P42285 1042 aaKnown RBP4.43□□□□□ -1.7
CLK1-208ENST00000464454 CASP2P42575 452 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 RXRGP48443 463 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 ZBTB16Q05516 673 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 SLC18A3Q16572 532 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 ZNF766Q5HY98 468 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 HYIQ5T013 277 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 FAM69AQ5T7M9 428 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 WDR78Q5VTH9 848 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 FAM171A1Q5VUB5 890 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 TMEM268Q5VZI3 342 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 NAPEPLDQ6IQ20 393 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 TMED8Q6PL24 325 aaPredicted RBP4.43□□□□□ -1.7
CLK1-208ENST00000464454 COLCA1Q6ZS62 124 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 C1orf122Q6ZSJ8 110 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 B4GALNT4Q76KP1 1039 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 KDELC2Q7Z4H8 507 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 DPP10Q8N608 796 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 SCAIQ8N9R8 606 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 SETD9Q8NE22 299 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 ZNF548Q8NEK5 533 aaPredicted RBP4.43□□□□□ -1.7
CLK1-208ENST00000464454 EME1Q96AY2 570 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 ELP4Q96EB1 424 aa4.43□□□□□ -1.7
CLK1-208ENST00000464454 VCPIP1Q96JH7 1222 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms