RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 ZDHHC9Q9Y397 364 aa13.61□□□□□ -0.23
MRPL55-224ENST00000464148 OR51B4Q9Y5P0 310 aa13.61□□□□□ -0.23
MRPL55-224ENST00000464148 HS3ST3A1Q9Y663 406 aa13.61□□□□□ -0.23
MRPL55-224ENST00000464148 CSNK1G3Q9Y6M4 447 aa13.61□□□□□ -0.23
MRPL55-224ENST00000464148 SPTY2D1-AS1A0A0U1RR47 76 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 FAM237AA0A1B0GTK4 181 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 PMS2P1A4D2B8 440 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 POM121BA6NF01 834 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 CDRT15L2A8MXV6 281 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 K7ERQ8 282 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 RIOK3O14730 519 aaKnown RBP13.6□□□□□ -0.23
MRPL55-224ENST00000464148 MUSKO15146 869 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 AQP9O43315 295 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 MED7O43513 233 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 CLDN11O75508 207 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 TCEA3O75764 348 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 ZNF202O95125 648 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 PAK4O96013 591 aaPredicted RBP13.6□□□□□ -0.23
MRPL55-224ENST00000464148 NME1P15531 152 aaKnown RBP13.6□□□□□ -0.23
MRPL55-224ENST00000464148 RECQLP46063 649 aaPredicted RBP13.6□□□□□ -0.23
MRPL55-224ENST00000464148 RPS21P63220 83 aaKnown RBP13.6□□□□□ -0.23
MRPL55-224ENST00000464148 KRT85P78386 507 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 CLN3Q13286 438 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 TAF5Q15542 800 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 NFKBIBQ15653 356 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 DEFB133Q30KQ1 61 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 TMEM259Q4ZIN3 620 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 ARSIQ5FYB1 569 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 C6orf132Q5T0Z8 1188 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 PARGQ86W56 976 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 ARHGEF19Q8IW93 802 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 CHST14Q8NCH0 376 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 WDR36Q8NI36 951 aaKnown RBP13.6□□□□□ -0.23
MRPL55-224ENST00000464148 LMX1AQ8TE12 382 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 GLMNQ92990 594 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 PRR11Q96HE9 360 aaPredicted RBP13.6□□□□□ -0.23
MRPL55-224ENST00000464148 BMFQ96LC9 184 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 CCNL2Q96S94 520 aaPredicted RBP13.6□□□□□ -0.23
MRPL55-224ENST00000464148 C2orf49Q9BVC5 232 aaPredicted RBP13.6□□□□□ -0.23
MRPL55-224ENST00000464148 SLC4A5Q9BY07 1137 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 HDAC8Q9BY41 377 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 SLC17A9Q9BYT1 436 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 SYNDIG1Q9H7V2 258 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 IL36AQ9UHA7 158 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 IL17BQ9UHF5 180 aa13.6□□□□□ -0.23
MRPL55-224ENST00000464148 COL12A1Q99715 3063 aa13.59□□□□□ -0.23
MRPL55-224ENST00000464148 EME2A4GXA9 379 aaPredicted RBP13.59□□□□□ -0.23
MRPL55-224ENST00000464148 TRIM49BA6NDI0 452 aa13.59□□□□□ -0.23
MRPL55-224ENST00000464148 SNAP91O60641 907 aa13.59□□□□□ -0.23
MRPL55-224ENST00000464148 LETM1O95202 739 aaPredicted RBP13.59□□□□□ -0.23
MRPL55-224ENST00000464148 JUNDP17535 347 aa13.59□□□□□ -0.23
MRPL55-224ENST00000464148 RRM1P23921 792 aa13.59□□□□□ -0.23
MRPL55-224ENST00000464148 GGCXP38435 758 aa13.59□□□□□ -0.23
MRPL55-224ENST00000464148 MLLT3P42568 568 aaPredicted RBP13.59□□□□□ -0.23
MRPL55-224ENST00000464148 RABIFP47224 123 aa13.59□□□□□ -0.23
MRPL55-224ENST00000464148 RPIAP49247 311 aa13.59□□□□□ -0.23
MRPL55-224ENST00000464148 PMS1P54277 932 aaKnown RBP13.59□□□□□ -0.23
MRPL55-224ENST00000464148 GCNT1Q02742 428 aa13.59□□□□□ -0.23
MRPL55-224ENST00000464148 LRRC63Q05C16 580 aa13.59□□□□□ -0.23
MRPL55-224ENST00000464148 NME3Q13232 169 aa13.59□□□□□ -0.23
MRPL55-224ENST00000464148 MTA1Q13330 715 aa13.59□□□□□ -0.23
MRPL55-224ENST00000464148 PNOCQ13519 176 aa13.59□□□□□ -0.23
MRPL55-224ENST00000464148 EIF4EBP2Q13542 120 aaPredicted RBP13.59□□□□□ -0.23
MRPL55-224ENST00000464148 ARL13BQ3SXY8 428 aa13.59□□□□□ -0.23
MRPL55-224ENST00000464148 CCDC40Q4G0X9 1142 aa13.59□□□□□ -0.23
MRPL55-224ENST00000464148 ZNF658Q5TYW1 1059 aaPredicted RBP13.59□□□□□ -0.23
MRPL55-224ENST00000464148 KIAA1161Q6NSJ0 714 aa13.59□□□□□ -0.23
MRPL55-224ENST00000464148 KYAT3Q6YP21 454 aaKnown RBP13.59□□□□□ -0.23
MRPL55-224ENST00000464148 TMEM110Q86TL2 294 aa13.59□□□□□ -0.23
MRPL55-224ENST00000464148 DEFB106AQ8N104 65 aa13.59□□□□□ -0.23
MRPL55-224ENST00000464148 FEM1CQ96JP0 617 aa13.59□□□□□ -0.23
MRPL55-224ENST00000464148 ARHGAP9Q9BRR9 750 aa13.59□□□□□ -0.23
MRPL55-224ENST00000464148 SIK2Q9H0K1 926 aa13.59□□□□□ -0.23
MRPL55-224ENST00000464148 TNKS2Q9H2K2 1166 aa13.59□□□□□ -0.23
MRPL55-224ENST00000464148 GOLPH3LQ9H4A5 285 aa13.59□□□□□ -0.23
MRPL55-224ENST00000464148 SALL4Q9UJQ4 1053 aa13.59□□□□□ -0.23
MRPL55-224ENST00000464148 TBC1D30Q9Y2I9 924 aa13.59□□□□□ -0.23
MRPL55-224ENST00000464148 HS3ST4Q9Y661 456 aa13.59□□□□□ -0.23
MRPL55-224ENST00000464148 CCDC187A0A096LP49 1063 aa13.58□□□□□ -0.24
MRPL55-224ENST00000464148 RNF103O00237 685 aa13.58□□□□□ -0.24
MRPL55-224ENST00000464148 FPGTO14772 594 aa13.58□□□□□ -0.24
MRPL55-224ENST00000464148 PMM2O15305 246 aa13.58□□□□□ -0.24
MRPL55-224ENST00000464148 THAP12O43422 761 aa13.58□□□□□ -0.24
MRPL55-224ENST00000464148 SMAD6O43541 496 aaKnown RBP13.58□□□□□ -0.24
MRPL55-224ENST00000464148 LEFTY1O75610 366 aa13.58□□□□□ -0.24
MRPL55-224ENST00000464148 ENDOD1O94919 500 aa13.58□□□□□ -0.24
MRPL55-224ENST00000464148 GJB6O95452 261 aa13.58□□□□□ -0.24
MRPL55-224ENST00000464148 RHOCP08134 193 aa13.58□□□□□ -0.24
MRPL55-224ENST00000464148 NEK3P51956 506 aa13.58□□□□□ -0.24
MRPL55-224ENST00000464148 CDH4P55283 916 aa13.58□□□□□ -0.24
MRPL55-224ENST00000464148 SGCGQ13326 291 aa13.58□□□□□ -0.24
MRPL55-224ENST00000464148 PDE1CQ14123 709 aaPredicted RBP13.58□□□□□ -0.24
MRPL55-224ENST00000464148 SPIDRQ14159 915 aa13.58□□□□□ -0.24
MRPL55-224ENST00000464148 DRAP1Q14919 205 aaPredicted RBP13.58□□□□□ -0.24
MRPL55-224ENST00000464148 PERM1Q5SV97 790 aa13.58□□□□□ -0.24
MRPL55-224ENST00000464148 LINGO4Q6UY18 593 aa13.58□□□□□ -0.24
MRPL55-224ENST00000464148 USP53Q70EK8 1073 aa13.58□□□□□ -0.24
MRPL55-224ENST00000464148 CLEC14AQ86T13 490 aa13.58□□□□□ -0.24
MRPL55-224ENST00000464148 EXD3Q8N9H8 876 aa13.58□□□□□ -0.24
MRPL55-224ENST00000464148 WDR48Q8TAF3 677 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms