RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 C14orf80Q86SX3 495 aa17.69■□□□□ 0.42
HMGN1-210ENST00000464078 SETD3Q86TU7 594 aaPredicted RBP17.69■□□□□ 0.42
HMGN1-210ENST00000464078 ZNF683Q8IZ20 524 aa17.69■□□□□ 0.42
HMGN1-210ENST00000464078 ATP11CQ8NB49 1132 aa17.69■□□□□ 0.42
HMGN1-210ENST00000464078 ZNF397Q8NF99 534 aaPredicted RBP17.69■□□□□ 0.42
HMGN1-210ENST00000464078 PPP1R16AQ96I34 528 aa17.69■□□□□ 0.42
HMGN1-210ENST00000464078 NOX5Q96PH1 765 aa17.69■□□□□ 0.42
HMGN1-210ENST00000464078 FZD3Q9NPG1 666 aa17.69■□□□□ 0.42
HMGN1-210ENST00000464078 ASCL3Q9NQ33 180 aa17.69■□□□□ 0.42
HMGN1-210ENST00000464078 DYRK4Q9NR20 520 aa17.69■□□□□ 0.42
HMGN1-210ENST00000464078 ZFR2Q9UPR6 939 aaKnown RBP17.69■□□□□ 0.42
HMGN1-210ENST00000464078 SSUH2Q9Y2M2 353 aa17.69■□□□□ 0.42
HMGN1-210ENST00000464078 DOCK4Q8N1I0 1966 aa17.69■□□□□ 0.42
HMGN1-210ENST00000464078 SNAP91O60641 907 aa17.68■□□□□ 0.42
HMGN1-210ENST00000464078 USP12O75317 370 aa17.68■□□□□ 0.42
HMGN1-210ENST00000464078 NME1P15531 152 aaKnown RBP17.68■□□□□ 0.42
HMGN1-210ENST00000464078 NOS2P35228 1153 aa17.68■□□□□ 0.42
HMGN1-210ENST00000464078 GGCXP38435 758 aa17.68■□□□□ 0.42
HMGN1-210ENST00000464078 HNRNPKP61978 463 aaKnown RBP eCLIP17.68■□□□□ 0.42
HMGN1-210ENST00000464078 NME3Q13232 169 aa17.68■□□□□ 0.42
HMGN1-210ENST00000464078 BRMS1LQ5PSV4 323 aa17.68■□□□□ 0.42
HMGN1-210ENST00000464078 C22orf39Q6P5X5 142 aa17.68■□□□□ 0.42
HMGN1-210ENST00000464078 KYAT3Q6YP21 454 aaKnown RBP17.68■□□□□ 0.42
HMGN1-210ENST00000464078 FAM183BPQ6ZVS7 135 aa17.68■□□□□ 0.42
HMGN1-210ENST00000464078 ZNF548Q8NEK5 533 aaPredicted RBP17.68■□□□□ 0.42
HMGN1-210ENST00000464078 KCNE4Q8WWG9 221 aa17.68■□□□□ 0.42
HMGN1-210ENST00000464078 SHC3Q92529 594 aa17.68■□□□□ 0.42
HMGN1-210ENST00000464078 KLK6Q92876 244 aa17.68■□□□□ 0.42
HMGN1-210ENST00000464078 GRAMD1AQ96CP6 724 aa17.68■□□□□ 0.42
HMGN1-210ENST00000464078 DPH1Q9BZG8 443 aa17.68■□□□□ 0.42
HMGN1-210ENST00000464078 THSD1Q9NS62 852 aa17.68■□□□□ 0.42
HMGN1-210ENST00000464078 ARHGEF38Q9NXL2 777 aa17.68■□□□□ 0.42
HMGN1-210ENST00000464078 RRN3Q9NYV6 651 aa17.68■□□□□ 0.42
HMGN1-210ENST00000464078 NCKIPSDQ9NZQ3 722 aa17.68■□□□□ 0.42
HMGN1-210ENST00000464078 CTNND2Q9UQB3 1225 aa17.68■□□□□ 0.42
HMGN1-210ENST00000464078 HS3ST3A1Q9Y663 406 aa17.68■□□□□ 0.42
HMGN1-210ENST00000464078 K7ERQ8 282 aa17.67■□□□□ 0.42
HMGN1-210ENST00000464078 K7ESM1 405 aa17.67■□□□□ 0.42
HMGN1-210ENST00000464078 SMAD6O43541 496 aaKnown RBP17.67■□□□□ 0.42
HMGN1-210ENST00000464078 GRAP2O75791 330 aa17.67■□□□□ 0.42
HMGN1-210ENST00000464078 CNTN5O94779 1100 aa17.67■□□□□ 0.42
HMGN1-210ENST00000464078 PCDH8O95206 1070 aa17.67■□□□□ 0.42
HMGN1-210ENST00000464078 RHOCP08134 193 aa17.67■□□□□ 0.42
HMGN1-210ENST00000464078 RRM1P23921 792 aa17.67■□□□□ 0.42
HMGN1-210ENST00000464078 CXCR3P49682 368 aa17.67■□□□□ 0.42
HMGN1-210ENST00000464078 CLDN2P57739 230 aa17.67■□□□□ 0.42
HMGN1-210ENST00000464078 SNX16P57768 344 aa17.67■□□□□ 0.42
HMGN1-210ENST00000464078 MORC3Q14149 939 aa17.67■□□□□ 0.42
HMGN1-210ENST00000464078 ALFQ53S48 1182 aa17.67■□□□□ 0.42
HMGN1-210ENST00000464078 ACBD5Q5T8D3 534 aaPredicted RBP17.67■□□□□ 0.42
HMGN1-210ENST00000464078 SEL1L3Q68CR1 1132 aa17.67■□□□□ 0.42
HMGN1-210ENST00000464078 ISM2Q6H9L7 571 aa17.67■□□□□ 0.42
HMGN1-210ENST00000464078 KIAA1161Q6NSJ0 714 aa17.67■□□□□ 0.42
HMGN1-210ENST00000464078 ZCCHC8Q6NZY4 707 aaKnown RBP17.67■□□□□ 0.42
HMGN1-210ENST00000464078 PTAR1Q7Z6K3 402 aaPredicted RBP17.67■□□□□ 0.42
HMGN1-210ENST00000464078 ZSCAN30Q86W11 494 aa17.67■□□□□ 0.42
HMGN1-210ENST00000464078 CHST14Q8NCH0 376 aa17.67■□□□□ 0.42
HMGN1-210ENST00000464078 GRIN3AQ8TCU5 1115 aa17.67■□□□□ 0.42
HMGN1-210ENST00000464078 NPY6RQ99463 290 aa17.67■□□□□ 0.42
HMGN1-210ENST00000464078 PIGVQ9NUD9 493 aa17.67■□□□□ 0.42
HMGN1-210ENST00000464078 TMEM51Q9NW97 253 aa17.67■□□□□ 0.42
HMGN1-210ENST00000464078 DNAJC28Q9NX36 388 aa17.67■□□□□ 0.42
HMGN1-210ENST00000464078 APEX2Q9UBZ4 518 aa17.67■□□□□ 0.42
HMGN1-210ENST00000464078 IL36AQ9UHA7 158 aa17.67■□□□□ 0.42
HMGN1-210ENST00000464078 CSNK1G3Q9Y6M4 447 aa17.67■□□□□ 0.42
HMGN1-210ENST00000464078 WASF2Q9Y6W5 498 aa17.67■□□□□ 0.42
HMGN1-210ENST00000464078 IGLV3-10A0A075B6K4 115 aa17.66■□□□□ 0.42
HMGN1-210ENST00000464078 SPTY2D1-AS1A0A0U1RR47 76 aa17.66■□□□□ 0.42
HMGN1-210ENST00000464078 I6L893 689 aaPredicted RBP17.66■□□□□ 0.42
HMGN1-210ENST00000464078 J3QKU1 62 aa17.66■□□□□ 0.42
HMGN1-210ENST00000464078 M0QYT0 321 aa17.66■□□□□ 0.42
HMGN1-210ENST00000464078 RNF103O00237 685 aa17.66■□□□□ 0.42
HMGN1-210ENST00000464078 CSF2P04141 144 aa17.66■□□□□ 0.42
HMGN1-210ENST00000464078 ERBB2P04626 1255 aa17.66■□□□□ 0.42
HMGN1-210ENST00000464078 ITGB7P26010 798 aa17.66■□□□□ 0.42
HMGN1-210ENST00000464078 NEK3P51956 506 aa17.66■□□□□ 0.42
HMGN1-210ENST00000464078 RPS21P63220 83 aaKnown RBP17.66■□□□□ 0.42
HMGN1-210ENST00000464078 SKOR1P84550 965 aa17.66■□□□□ 0.42
HMGN1-210ENST00000464078 SLC6A3Q01959 620 aa17.66■□□□□ 0.42
HMGN1-210ENST00000464078 PAK1Q13153 545 aa17.66■□□□□ 0.42
HMGN1-210ENST00000464078 FZD2Q14332 565 aa17.66■□□□□ 0.42
HMGN1-210ENST00000464078 ISXQ2M1V0 245 aa17.66■□□□□ 0.42
HMGN1-210ENST00000464078 TAF1BQ53T94 588 aaPredicted RBP17.66■□□□□ 0.42
HMGN1-210ENST00000464078 Q6ZSR6 202 aa17.66■□□□□ 0.42
HMGN1-210ENST00000464078 PARGQ86W56 976 aa17.66■□□□□ 0.42
HMGN1-210ENST00000464078 NT5C3BQ969T7 300 aa17.66■□□□□ 0.42
HMGN1-210ENST00000464078 PGAP3Q96FM1 320 aaPredicted RBP17.66■□□□□ 0.42
HMGN1-210ENST00000464078 CEP44Q9C0F1 390 aa17.66■□□□□ 0.42
HMGN1-210ENST00000464078 SIK2Q9H0K1 926 aa17.66■□□□□ 0.42
HMGN1-210ENST00000464078 ABCG4Q9H172 646 aa17.66■□□□□ 0.42
HMGN1-210ENST00000464078 CAAP1Q9H8G2 361 aa17.66■□□□□ 0.42
HMGN1-210ENST00000464078 CPNE5Q9HCH3 593 aa17.66■□□□□ 0.42
HMGN1-210ENST00000464078 ANLNQ9NQW6 1124 aa17.66■□□□□ 0.42
HMGN1-210ENST00000464078 PAXBP1Q9Y5B6 917 aa17.66■□□□□ 0.42
HMGN1-210ENST00000464078 A0A0D9SEW6 157 aa17.65■□□□□ 0.42
HMGN1-210ENST00000464078 DRGXA6NNA5 263 aa17.65■□□□□ 0.42
HMGN1-210ENST00000464078 H3BM21 787 aa17.65■□□□□ 0.42
HMGN1-210ENST00000464078 AP1G1O43747 822 aa17.65■□□□□ 0.42
HMGN1-210ENST00000464078 ZNF821O75541 412 aaPredicted RBP17.65■□□□□ 0.42
HMGN1-210ENST00000464078 LEFTY1O75610 366 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms