RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ETFBP38117 255 aa13.02□□□□□ -0.33
VAPB-203ENST00000463370 GP5P40197 560 aa13.02□□□□□ -0.33
VAPB-203ENST00000463370 SGSHP51688 502 aa13.02□□□□□ -0.33
VAPB-203ENST00000463370 WDR5P61964 334 aaKnown RBP13.02□□□□□ -0.33
VAPB-203ENST00000463370 DSC2Q02487 901 aa13.02□□□□□ -0.33
VAPB-203ENST00000463370 ACTN3Q08043 901 aaPredicted RBP13.02□□□□□ -0.33
VAPB-203ENST00000463370 HNRNPDQ14103 355 aaKnown RBP13.02□□□□□ -0.33
VAPB-203ENST00000463370 POLD3Q15054 466 aaPredicted RBP13.02□□□□□ -0.33
VAPB-203ENST00000463370 LINC00523Q86TU6 105 aa13.02□□□□□ -0.33
VAPB-203ENST00000463370 MICALL1Q8N3F8 863 aa13.02□□□□□ -0.33
VAPB-203ENST00000463370 TMEM169Q96HH4 297 aa13.02□□□□□ -0.33
VAPB-203ENST00000463370 ZNF558Q96NG5 402 aa13.02□□□□□ -0.33
VAPB-203ENST00000463370 NACA2Q9H009 215 aa13.02□□□□□ -0.33
VAPB-203ENST00000463370 ZNF395Q9H8N7 513 aaPredicted RBP13.02□□□□□ -0.33
VAPB-203ENST00000463370 NPHS2Q9NP85 383 aa13.02□□□□□ -0.33
VAPB-203ENST00000463370 IARS2Q9NSE4 1012 aaKnown RBP13.02□□□□□ -0.33
VAPB-203ENST00000463370 ZNF358Q9NW07 568 aa13.02□□□□□ -0.33
VAPB-203ENST00000463370 WBP1LQ9NX94 342 aa13.02□□□□□ -0.33
VAPB-203ENST00000463370 MKS1Q9NXB0 559 aa13.02□□□□□ -0.33
VAPB-203ENST00000463370 YIPF1Q9Y548 306 aa13.02□□□□□ -0.33
VAPB-203ENST00000463370 CAPN7Q9Y6W3 813 aa13.02□□□□□ -0.33
VAPB-203ENST00000463370 CCDC195A0A1B0GUA6 201 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 MUSKO15146 869 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 PRKCGP05129 697 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 CNTFP26441 200 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 ARNTP27540 789 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 CD86P42081 329 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 MAGEA9P43362 315 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 WNT3AP56704 352 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 RPS24P62847 133 aaKnown RBP13.01□□□□□ -0.33
VAPB-203ENST00000463370 ITKQ08881 620 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 PLD1Q13393 1074 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 BTG3Q14201 252 aaPredicted RBP13.01□□□□□ -0.33
VAPB-203ENST00000463370 DLG2Q15700 870 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 MARC1Q5VT66 337 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 ESRP1Q6NXG1 681 aaKnown RBP13.01□□□□□ -0.33
VAPB-203ENST00000463370 KDELC1Q6UW63 502 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 RANBP10Q6VN20 620 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 FAM43BQ6ZT52 329 aaPredicted RBP13.01□□□□□ -0.33
VAPB-203ENST00000463370 LRRC49Q8IUZ0 686 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 DENND1CQ8IV53 801 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 DCLK2Q8N568 766 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 SLC25A41Q8N5S1 370 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 RFWD2Q8NHY2 731 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 GRAMD1AQ96CP6 724 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 RBBP8Q99708 897 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 CPNE1Q99829 537 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 FSD1LQ9BXM9 530 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 CAB39LQ9H9S4 337 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 SP110Q9HB58 689 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 FNIP2Q9P278 1114 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 MTO1Q9Y2Z2 717 aaKnown RBP13.01□□□□□ -0.33
VAPB-203ENST00000463370 GREB1Q4ZG55 1949 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 MAGEB16A2A368 324 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 NEBLO76041 1014 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 FSBPO95073 299 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 SPATA31D3P0C874 917 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 GEMP55040 296 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 PDE1BQ01064 536 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 NAB1Q13506 487 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 SERINC3Q13530 473 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 ANO4Q32M45 955 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 HECTD3Q5T447 861 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 SNX30Q5VWJ9 437 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 FSTL4Q6MZW2 842 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 PKN3Q6P5Z2 889 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 SPATA31D4Q6ZUB0 917 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 C10orf82Q8WW14 230 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 IMP4Q96G21 291 aaKnown RBP13.01□□□□□ -0.33
VAPB-203ENST00000463370 PRICKLE1Q96MT3 831 aaPredicted RBP13.01□□□□□ -0.33
VAPB-203ENST00000463370 MCMBPQ9BTE3 642 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 SLC25A51Q9H1U9 297 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 KLHL14Q9P2G3 628 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 TXNDC16Q9P2K2 825 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 SLC12A4Q9UP95 1085 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 HBS1LQ9Y450 684 aaKnown RBP13.01□□□□□ -0.33
VAPB-203ENST00000463370 ZFP37Q9Y6Q3 630 aaPredicted RBP13.01□□□□□ -0.33
VAPB-203ENST00000463370 NUMBLQ9Y6R0 609 aa13.01□□□□□ -0.33
VAPB-203ENST00000463370 ABHD14A-ACY1A0A1B0GW23 586 aa13□□□□□ -0.33
VAPB-203ENST00000463370 PSMD3O43242 534 aa13□□□□□ -0.33
VAPB-203ENST00000463370 ACSL4O60488 711 aa13□□□□□ -0.33
VAPB-203ENST00000463370 IRF1P10914 325 aa13□□□□□ -0.33
VAPB-203ENST00000463370 RENBPP51606 427 aa13□□□□□ -0.33
VAPB-203ENST00000463370 FRG1Q14331 258 aaKnown RBP13□□□□□ -0.33
VAPB-203ENST00000463370 PCID2Q5JVF3 399 aa13□□□□□ -0.33
VAPB-203ENST00000463370 RNF43Q68DV7 783 aa13□□□□□ -0.33
VAPB-203ENST00000463370 TMEM150AQ86TG1 271 aa13□□□□□ -0.33
VAPB-203ENST00000463370 TSSK1BQ9BXA7 367 aa13□□□□□ -0.33
VAPB-203ENST00000463370 SNX15Q9NRS6 342 aa13□□□□□ -0.33
VAPB-203ENST00000463370 DCTN4Q9UJW0 460 aa13□□□□□ -0.33
VAPB-203ENST00000463370 F5H5T6 163 aa13□□□□□ -0.33
VAPB-203ENST00000463370 H3BNC9 293 aa13□□□□□ -0.33
VAPB-203ENST00000463370 STC2O76061 302 aa13□□□□□ -0.33
VAPB-203ENST00000463370 NEFHP12036 1026 aa13□□□□□ -0.33
VAPB-203ENST00000463370 GABRB3P28472 473 aa13□□□□□ -0.33
VAPB-203ENST00000463370 LIMK2P53671 638 aa13□□□□□ -0.33
VAPB-203ENST00000463370 TWF1Q12792 350 aa13□□□□□ -0.33
VAPB-203ENST00000463370 GALNTL6Q49A17 601 aa13□□□□□ -0.33
VAPB-203ENST00000463370 N4BP2L1Q5TBK1 243 aaPredicted RBP13□□□□□ -0.33
VAPB-203ENST00000463370 GRTP1Q5TC63 336 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms