RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 C5orf60A6NFR6 353 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 SHISA7A6NL88 538 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 HEXIM1O94992 359 aaKnown RBP13.72□□□□□ -0.21
PBRM1-219ENST00000462207 KAT7O95251 611 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 POLR2EP19388 210 aaKnown RBP13.72□□□□□ -0.21
PBRM1-219ENST00000462207 STIP1P31948 543 aaKnown RBP13.72□□□□□ -0.21
PBRM1-219ENST00000462207 CD68P34810 354 aaPredicted RBP13.72□□□□□ -0.21
PBRM1-219ENST00000462207 EIF2DP41214 584 aaKnown RBP13.72□□□□□ -0.21
PBRM1-219ENST00000462207 MMP13P45452 471 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 RGRP47804 291 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 SERPINH1P50454 418 aaKnown RBP13.72□□□□□ -0.21
PBRM1-219ENST00000462207 GALK1P51570 392 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 LMNB2Q03252 620 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 HNRNPDQ14103 355 aaKnown RBP13.72□□□□□ -0.21
PBRM1-219ENST00000462207 DMC1Q14565 340 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 CYTH1Q15438 398 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 TEX44Q53QW1 395 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 MARC1Q5VT66 337 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 ATXN2LQ8WWM7 1075 aaKnown RBP13.72□□□□□ -0.21
PBRM1-219ENST00000462207 FATE1Q969F0 183 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 TTC17Q96AE7 1141 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 ACDQ96AP0 544 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 P2RY13Q9BPV8 354 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 SLC2A4RGQ9NR83 387 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 ASIC3Q9UHC3 531 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 TCF20Q9UGU0 1960 aaKnown RBP13.72□□□□□ -0.21
PBRM1-219ENST00000462207 ESYT3A0FGR9 886 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 TBC1D3BA6NDS4 549 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 FAM187AA6NFU0 413 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 EFCAB8A8MWE9 144 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.72□□□□□ -0.21
PBRM1-219ENST00000462207 MTSS1O43312 755 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 GCATO75600 419 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 METTL18O95568 372 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 NFKB1P19838 968 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 ECT2LQ008S8 904 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 GPS1Q13098 491 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 ZNF235Q14590 738 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 PON2Q15165 354 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 TRADDQ15628 312 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 PTPRNQ16849 979 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 TPRG1Q6ZUI0 275 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 MAATS1Q7Z4T9 603 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 TEX26Q8N6G2 289 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 TSEN2Q8NCE0 465 aaKnown RBP13.72□□□□□ -0.21
PBRM1-219ENST00000462207 NSMCE1Q8WV22 266 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 MRGPRX3Q96LB0 322 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 TEKT5Q96M29 485 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 ZNF599Q96NL3 588 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 NECAB3Q96P71 396 aaPredicted RBP13.72□□□□□ -0.21
PBRM1-219ENST00000462207 CINPQ9BW66 212 aaPredicted RBP13.72□□□□□ -0.21
PBRM1-219ENST00000462207 DPH5Q9H2P9 285 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 CD320Q9NPF0 282 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 ELOVL2Q9NXB9 296 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 LHX3Q9UBR4 397 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 SLCO3A1Q9UIG8 710 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 HCN2Q9UL51 889 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 ERVW-1Q9UQF0 538 aa13.72□□□□□ -0.21
PBRM1-219ENST00000462207 STK10O94804 968 aaKnown RBP13.71□□□□□ -0.21
PBRM1-219ENST00000462207 APODP05090 189 aa13.71□□□□□ -0.21
PBRM1-219ENST00000462207 SRCP12931 536 aa13.71□□□□□ -0.21
PBRM1-219ENST00000462207 CD72P21854 359 aa13.71□□□□□ -0.21
PBRM1-219ENST00000462207 PSMB4P28070 264 aa13.71□□□□□ -0.21
PBRM1-219ENST00000462207 GRIA2P42262 883 aa13.71□□□□□ -0.21
PBRM1-219ENST00000462207 RENBPP51606 427 aa13.71□□□□□ -0.21
PBRM1-219ENST00000462207 PFKPQ01813 784 aa13.71□□□□□ -0.21
PBRM1-219ENST00000462207 P3H1Q32P28 736 aa13.71□□□□□ -0.21
PBRM1-219ENST00000462207 SYCP2LQ5T4T6 812 aa13.71□□□□□ -0.21
PBRM1-219ENST00000462207 RETSATQ6NUM9 610 aa13.71□□□□□ -0.21
PBRM1-219ENST00000462207 ARHGEF18Q6ZSZ5 1173 aa13.71□□□□□ -0.21
PBRM1-219ENST00000462207 PID1Q7Z2X4 250 aa13.71□□□□□ -0.21
PBRM1-219ENST00000462207 RALGPS2Q86X27 583 aaPredicted RBP13.71□□□□□ -0.21
PBRM1-219ENST00000462207 ATP11CQ8NB49 1132 aa13.71□□□□□ -0.21
PBRM1-219ENST00000462207 MYO19Q96H55 970 aa13.71□□□□□ -0.21
PBRM1-219ENST00000462207 GORASP1Q9BQQ3 440 aa13.71□□□□□ -0.21
PBRM1-219ENST00000462207 TM6SF2Q9BZW4 377 aa13.71□□□□□ -0.21
PBRM1-219ENST00000462207 TNKS2Q9H2K2 1166 aa13.71□□□□□ -0.21
PBRM1-219ENST00000462207 MTG2Q9H4K7 406 aa13.71□□□□□ -0.21
PBRM1-219ENST00000462207 FEZ2Q9UHY8 353 aaPredicted RBP13.71□□□□□ -0.21
PBRM1-219ENST00000462207 SLC25A13Q9UJS0 675 aa13.71□□□□□ -0.21
PBRM1-219ENST00000462207 CA14Q9ULX7 337 aa13.71□□□□□ -0.21
PBRM1-219ENST00000462207 SORCS3Q9UPU3 1222 aa13.71□□□□□ -0.21
PBRM1-219ENST00000462207 HS3ST2Q9Y278 367 aa13.71□□□□□ -0.21
PBRM1-219ENST00000462207 OPHN1O60890 802 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 NEBLO76041 1014 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 DLDP09622 509 aaKnown RBP13.7□□□□□ -0.22
PBRM1-219ENST00000462207 DSC2Q02487 901 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 GUCY2DQ02846 1103 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 ERCC6LQ2NKX8 1250 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 SLC44A4Q53GD3 710 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 ATXN7L2Q5T6C5 722 aaPredicted RBP13.7□□□□□ -0.22
PBRM1-219ENST00000462207 EMC10Q5UCC4 262 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 FSTL4Q6MZW2 842 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 SYDE1Q6ZW31 735 aaPredicted RBP13.7□□□□□ -0.22
PBRM1-219ENST00000462207 SH2D3CQ8N5H7 860 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 ZNF366Q8N895 744 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 ANKRD7Q92527 254 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 VAT1Q99536 393 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 FERMT1Q9BQL6 677 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 GBA3Q9H227 469 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms