RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 HDAC8Q9BY41 377 aa12.14□□□□□ -0.47
HCFC1-204ENST00000461098 EVA1BQ9NVM1 165 aa12.14□□□□□ -0.47
HCFC1-204ENST00000461098 NCKIPSDQ9NZQ3 722 aa12.14□□□□□ -0.47
HCFC1-204ENST00000461098 ANKMY1Q9P2S6 941 aa12.14□□□□□ -0.47
HCFC1-204ENST00000461098 ACSL6Q9UKU0 697 aa12.14□□□□□ -0.47
HCFC1-204ENST00000461098 TBC1D30Q9Y2I9 924 aa12.14□□□□□ -0.47
HCFC1-204ENST00000461098 PCDHGA7Q9Y5G6 932 aa12.14□□□□□ -0.47
HCFC1-204ENST00000461098 KPNA3O00505 521 aaPredicted RBP12.13□□□□□ -0.47
HCFC1-204ENST00000461098 RIOK3O14730 519 aaKnown RBP12.13□□□□□ -0.47
HCFC1-204ENST00000461098 MUSKO15146 869 aa12.13□□□□□ -0.47
HCFC1-204ENST00000461098 ZNF821O75541 412 aaPredicted RBP12.13□□□□□ -0.47
HCFC1-204ENST00000461098 PCDH8O95206 1070 aa12.13□□□□□ -0.47
HCFC1-204ENST00000461098 PAK4O96013 591 aaPredicted RBP12.13□□□□□ -0.47
HCFC1-204ENST00000461098 EPB41P11171 864 aaKnown RBP12.13□□□□□ -0.47
HCFC1-204ENST00000461098 CMA1P23946 247 aa12.13□□□□□ -0.47
HCFC1-204ENST00000461098 OXCT1P55809 520 aa12.13□□□□□ -0.47
HCFC1-204ENST00000461098 NUCB2P80303 420 aa12.13□□□□□ -0.47
HCFC1-204ENST00000461098 NR0B2Q15466 257 aa12.13□□□□□ -0.47
HCFC1-204ENST00000461098 TAF5Q15542 800 aa12.13□□□□□ -0.47
HCFC1-204ENST00000461098 C5orf22Q49AR2 442 aa12.13□□□□□ -0.47
HCFC1-204ENST00000461098 DCAF17Q5H9S7 520 aaPredicted RBP12.13□□□□□ -0.47
HCFC1-204ENST00000461098 B3GNT8Q7Z7M8 397 aa12.13□□□□□ -0.47
HCFC1-204ENST00000461098 SMYD4Q8IYR2 804 aaPredicted RBP12.13□□□□□ -0.47
HCFC1-204ENST00000461098 ATP6V0D2Q8N8Y2 350 aa12.13□□□□□ -0.47
HCFC1-204ENST00000461098 SLC35C1Q96A29 364 aa12.13□□□□□ -0.47
HCFC1-204ENST00000461098 LIN37Q96GY3 246 aaPredicted RBP12.13□□□□□ -0.47
HCFC1-204ENST00000461098 SLC4A5Q9BY07 1137 aa12.13□□□□□ -0.47
HCFC1-204ENST00000461098 SLC17A9Q9BYT1 436 aa12.13□□□□□ -0.47
HCFC1-204ENST00000461098 TCEAL2Q9H3H9 227 aaPredicted RBP12.13□□□□□ -0.47
HCFC1-204ENST00000461098 POPDC2Q9HBU9 364 aa12.13□□□□□ -0.47
HCFC1-204ENST00000461098 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.13□□□□□ -0.47
HCFC1-204ENST00000461098 USP25Q9UHP3 1055 aa12.13□□□□□ -0.47
HCFC1-204ENST00000461098 CETN3O15182 167 aa12.12□□□□□ -0.47
HCFC1-204ENST00000461098 SNAP91O60641 907 aa12.12□□□□□ -0.47
HCFC1-204ENST00000461098 GJB6O95452 261 aa12.12□□□□□ -0.47
HCFC1-204ENST00000461098 F13A1P00488 732 aa12.12□□□□□ -0.47
HCFC1-204ENST00000461098 JUNDP17535 347 aa12.12□□□□□ -0.47
HCFC1-204ENST00000461098 WT1P19544 449 aaPredicted RBP12.12□□□□□ -0.47
HCFC1-204ENST00000461098 RRM1P23921 792 aa12.12□□□□□ -0.47
HCFC1-204ENST00000461098 DNM1Q05193 864 aaKnown RBP12.12□□□□□ -0.47
HCFC1-204ENST00000461098 AUHQ13825 339 aaKnown RBP12.12□□□□□ -0.47
HCFC1-204ENST00000461098 PDE1CQ14123 709 aaPredicted RBP12.12□□□□□ -0.47
HCFC1-204ENST00000461098 STILQ15468 1287 aa12.12□□□□□ -0.47
HCFC1-204ENST00000461098 ARSIQ5FYB1 569 aa12.12□□□□□ -0.47
HCFC1-204ENST00000461098 RABGAP1LQ5R372 815 aa12.12□□□□□ -0.47
HCFC1-204ENST00000461098 ARTNQ5T4W7 220 aa12.12□□□□□ -0.47
HCFC1-204ENST00000461098 TCERG1LQ5VWI1 586 aa12.12□□□□□ -0.47
HCFC1-204ENST00000461098 USP53Q70EK8 1073 aa12.12□□□□□ -0.47
HCFC1-204ENST00000461098 C14orf80Q86SX3 495 aa12.12□□□□□ -0.47
HCFC1-204ENST00000461098 TMEM110Q86TL2 294 aa12.12□□□□□ -0.47
HCFC1-204ENST00000461098 RBFAQ8N0V3 343 aa12.12□□□□□ -0.47
HCFC1-204ENST00000461098 LMO3Q8TAP4 145 aa12.12□□□□□ -0.47
HCFC1-204ENST00000461098 LMX1AQ8TE12 382 aa12.12□□□□□ -0.47
HCFC1-204ENST00000461098 RPRD1AQ96P16 312 aaPredicted RBP12.12□□□□□ -0.47
HCFC1-204ENST00000461098 LENG8Q96PV6 779 aaPredicted RBP12.12□□□□□ -0.47
HCFC1-204ENST00000461098 CCDC3Q9BQI4 270 aa12.12□□□□□ -0.47
HCFC1-204ENST00000461098 CLPBQ9H078 707 aa12.12□□□□□ -0.47
HCFC1-204ENST00000461098 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.12□□□□□ -0.47
HCFC1-204ENST00000461098 RABGEF1Q9UJ41 708 aa12.12□□□□□ -0.47
HCFC1-204ENST00000461098 VPS28Q9UK41 221 aa12.12□□□□□ -0.47
HCFC1-204ENST00000461098 PCDHB4Q9Y5E5 795 aa12.12□□□□□ -0.47
HCFC1-204ENST00000461098 FADS3Q9Y5Q0 445 aa12.12□□□□□ -0.47
HCFC1-204ENST00000461098 WASF2Q9Y6W5 498 aa12.12□□□□□ -0.47
HCFC1-204ENST00000461098 USP9YO00507 2555 aaPredicted RBP12.11□□□□□ -0.47
HCFC1-204ENST00000461098 FAM237AA0A1B0GTK4 181 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 CLEC18AA5D8T8 446 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 E5RJQ4 531 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 H3BM21 787 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 PLD2O14939 933 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 SART1O43290 800 aaKnown RBP12.11□□□□□ -0.47
HCFC1-204ENST00000461098 LEFTY1O75610 366 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 CNTN5O94779 1100 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 PRNPP04156 253 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 NTRK1P04629 796 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 ZSCAN22P10073 491 aaPredicted RBP12.11□□□□□ -0.47
HCFC1-204ENST00000461098 ADRB3P13945 408 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 HGFP14210 728 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 UGT1A5P35504 534 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 GGCXP38435 758 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 RABIFP47224 123 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 NDUFA8P51970 172 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 PMS1P54277 932 aaKnown RBP12.11□□□□□ -0.47
HCFC1-204ENST00000461098 PFN3P60673 137 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 YWHAZP63104 245 aaKnown RBP12.11□□□□□ -0.47
HCFC1-204ENST00000461098 RPS21P63220 83 aaKnown RBP12.11□□□□□ -0.47
HCFC1-204ENST00000461098 TLE1Q04724 770 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 CCDC15Q0P6D6 951 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 MAPK8IP2Q13387 824 aaPredicted RBP12.11□□□□□ -0.47
HCFC1-204ENST00000461098 C1orf61Q13536 156 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 PKP1Q13835 747 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 TBR1Q16650 682 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 ATL3Q6DD88 541 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 KIAA1161Q6NSJ0 714 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 DENND1BQ6P3S1 775 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 CLEC18BQ6UXF7 455 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 DPY19L3Q6ZPD9 716 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 ATP11CQ8NB49 1132 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 CLEC18CQ8NCF0 446 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 HTR3CQ8WXA8 447 aa12.11□□□□□ -0.47
HCFC1-204ENST00000461098 VOPP1Q96AW1 172 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms