RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 ORC2Q13416 577 aaPredicted RBP5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 LPIN1Q14693 890 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 SHHQ15465 462 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 RESP18Q5W5W9 173 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 ARL6IP4Q66PJ3 421 aaKnown RBP5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 RINT1Q6NUQ1 792 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 PCSK4Q6UW60 755 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 ZNF365Q70YC5 407 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 LRRC8DQ7L1W4 858 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 TAS1R1Q7RTX1 841 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 RSPH3Q86UC2 560 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 GPBP1Q86WP2 473 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 RHPN2Q8IUC4 686 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 UNC5BQ8IZJ1 945 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 SH2D3CQ8N5H7 860 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 PIK3C3Q8NEB9 887 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 DBF4BQ8NFT6 615 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 RDM1Q8NG50 284 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 ERMNQ8TAM6 284 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 CCHCR1Q8TD31 782 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 C17orf50Q8WW18 174 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 LARP4BQ92615 738 aaKnown RBP5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 RAD54LQ92698 747 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 NKD2Q969F2 451 aaPredicted RBP5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 GFM2Q969S9 779 aaKnown RBP5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 NLRP4Q96MN2 994 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 CRB3Q9BUF7 120 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 KATNAL1Q9BW62 490 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 TRIM6Q9C030 488 aaPredicted RBP5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 WDR12Q9GZL7 423 aaKnown RBP5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 SLC6A15Q9H2J7 730 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 ZHX3Q9H4I2 956 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 EPHX3Q9H6B9 360 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 DHX33Q9H6R0 707 aaKnown RBP5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 TUFT1Q9NNX1 390 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 HOMER3Q9NSC5 361 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 TBC1D7Q9P0N9 293 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 SUCLA2Q9P2R7 463 aaPredicted RBP5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 LRCH1Q9Y2L9 728 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 ADGRA3Q8IWK6 1321 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 NRCAMQ92823 1304 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 TANC1Q9C0D5 1861 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 MYH11P35749 1972 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 A0A087WUV0 522 aaPredicted RBP5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 IGKV6-21A0A0C4DH24 114 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 SMIM35A0A1B0GVV1 85 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 A0A1W2PRX2 142 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 RRN3P2A6NIE6 340 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 TISP43B9A030 160 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 B4GALT5O43286 388 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 PPP6R2O75170 966 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 GPR32O75388 356 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 TUBB4AP04350 444 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 COL1A2P08123 1366 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 KITP10721 976 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 TYRP14679 529 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 MYOGP15173 224 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 CYP11B2P19099 503 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 NMT1P30419 496 aaKnown RBP5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 ARL2P36404 184 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 STAT6P42226 847 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 GPC3P51654 580 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 RPS6KA3P51812 740 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 NAP1L1P55209 391 aaKnown RBP5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 DEFB103AP81534 67 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 MRPS5P82675 430 aaKnown RBP5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 LAMTOR4Q0VGL1 99 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 ADAM15Q13444 863 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 CUL4BQ13620 913 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 CAPSQ13938 189 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 TRIM14Q14142 442 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 RAB39AQ14964 217 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 FAM209BQ5JX69 171 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 DGKKQ5KSL6 1271 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 FBXO47Q5MNV8 452 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 HYIQ5T013 277 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 IZUMO3Q5VZ72 239 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 RRAGBQ5VZM2 374 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 MFSD5Q6N075 450 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 CFAP47Q6ZTR5 3102 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 C1orf186Q6ZWK4 172 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 SETXQ7Z333 2677 aaKnown RBP5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 KIAA1328Q86T90 577 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 TRIM74Q86UV6 250 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 TRIM73Q86UV7 250 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 FAM228AQ86W67 206 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 PQLC1Q8N2U9 271 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 MIPOL1Q8TD10 442 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 HDAC7Q8WUI4 952 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 SLC7A6OSQ96CW6 309 aaPredicted RBP5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 CYFIP2Q96F07 1278 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 CALML4Q96GE6 196 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 TMEM176AQ96HP8 235 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 CPB2Q96IY4 423 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 CCDC43Q96MW1 224 aaKnown RBP5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 PRRX2Q99811 253 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 REEP2Q9BRK0 252 aa5.1□□□□□ -1.59
ATPAF1-203ENST00000460928 CRACR2AQ9BSW2 395 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms