RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 TBL1YQ9BQ87 522 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 EMILIN2Q9BXX0 1053 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 VPS11Q9H270 941 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 ZNF334Q9HCZ1 680 aaPredicted RBP8.19□□□□□ -1.1
SFPQ-202ENST00000460428 KCNK9Q9NPC2 374 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 PPANQ9NQ55 473 aaKnown RBP8.19□□□□□ -1.1
SFPQ-202ENST00000460428 NKIRAS1Q9NYS0 192 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 CXXC1Q9P0U4 656 aaPredicted RBP8.19□□□□□ -1.1
SFPQ-202ENST00000460428 AGO1Q9UL18 857 aaKnown RBP8.19□□□□□ -1.1
SFPQ-202ENST00000460428 RIMKLBQ9ULI2 386 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 ZNF510Q9Y2H8 683 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 IKBKGQ9Y6K9 419 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 ZFP37Q9Y6Q3 630 aaPredicted RBP8.19□□□□□ -1.1
SFPQ-202ENST00000460428 RPS6KL1Q9Y6S9 549 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 OBSL1O75147 1896 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 DENND4CQ5VZ89 1909 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 C2orf78A6NCI8 922 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 C2orf71A6NGG8 1288 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 FOXO6A8MYZ6 492 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 TRIM49D1C9J1S8 452 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 NDUFAB1O14561 156 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 FGF19O95750 216 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 IL1BP01584 269 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 MT-ND3P03897 115 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 HMBSP08397 361 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 KRT4P19013 534 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 CR2P20023 1033 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 ADRA1DP25100 572 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 PSMA3P25788 255 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 DDX6P26196 483 aaKnown RBP eCLIP8.18□□□□□ -1.17e-7■■■■■ 53.3
SFPQ-202ENST00000460428 CDC25CP30307 473 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 CORO1AP31146 461 aaKnown RBP8.18□□□□□ -1.1
SFPQ-202ENST00000460428 HOXA9P31269 272 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 CRHR1P34998 444 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 RPA3P35244 121 aaPredicted RBP8.18□□□□□ -1.1
SFPQ-202ENST00000460428 ETFBP38117 255 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 GP5P40197 560 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 ETV4P43268 484 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 POLD2P49005 469 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 CSRP3P50461 194 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 ERVFC1P60507 584 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 MTM1Q13496 603 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 LBRQ14739 615 aaKnown RBP8.18□□□□□ -1.1
SFPQ-202ENST00000460428 MPP7Q5T2T1 576 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 TEDDM1Q5T9Z0 273 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 PDE12Q6L8Q7 609 aaKnown RBP8.18□□□□□ -1.1
SFPQ-202ENST00000460428 C6orf89Q6UWU4 347 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 GAREM2Q75VX8 874 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 TFAP2DQ7Z6R9 452 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 GALNT7Q86SF2 657 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 DENND1CQ8IV53 801 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 KIAA1958Q8N8K9 716 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 DNAAF3Q8N9W5 541 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.18□□□□□ -1.1
SFPQ-202ENST00000460428 KREMEN2Q8NCW0 462 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 SPATA22Q8NHS9 363 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 SPOCK2Q92563 424 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 GRAMD1AQ96CP6 724 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 APOPT1Q96IL0 206 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 SERAC1Q96JX3 654 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 PRICKLE1Q96MT3 831 aaPredicted RBP8.18□□□□□ -1.1
SFPQ-202ENST00000460428 MGME1Q9BQP7 344 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 PRKD2Q9BZL6 878 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 MCOLN1Q9GZU1 580 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 NACA2Q9H009 215 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 KIF9Q9HAQ2 790 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 SP110Q9HB58 689 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 GKN1Q9NS71 199 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 TREX1Q9NSU2 369 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 HAUS2Q9NVX0 235 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 NSMCE4AQ9NXX6 385 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 SAMD15Q9P1V8 674 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 DNMT3BQ9UBC3 853 aaKnown RBP8.18□□□□□ -1.1
SFPQ-202ENST00000460428 ZMYM5Q9UJ78 669 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 SLC4A7Q9Y6M7 1214 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 SHROOM3Q8TF72 1996 aa8.18□□□□□ -1.1
SFPQ-202ENST00000460428 ATXN2Q99700 1313 aaKnown RBP8.18□□□□□ -1.1
SFPQ-202ENST00000460428 MYO18AQ92614 2054 aaKnown RBP8.18□□□□□ -1.1
SFPQ-202ENST00000460428 MTCL1Q9Y4B5 1905 aaKnown RBP8.17□□□□□ -1.1
SFPQ-202ENST00000460428 ZBBXA8MT70 800 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 EBAG9O00559 213 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 UGT1A9O60656 530 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 USP12O75317 370 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 ZMPSTE24O75844 475 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 MT-CYBP00156 380 aaPredicted RBP8.17□□□□□ -1.1
SFPQ-202ENST00000460428 GLUD1P00367 558 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 LRG1P02750 347 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 C8AP07357 584 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 MBL2P11226 248 aaPredicted RBP8.17□□□□□ -1.1
SFPQ-202ENST00000460428 ALADP13716 330 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 TCF3P15923 654 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 HDCP19113 662 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 TAC1P20366 129 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 DNAJB1P25685 340 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 GBP2P32456 591 aaPredicted RBP8.17□□□□□ -1.1
SFPQ-202ENST00000460428 ACVRL1P37023 503 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 HADHAP40939 763 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 CLCN4P51793 760 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 CSE1LP55060 971 aaKnown RBP8.17□□□□□ -1.1
SFPQ-202ENST00000460428 HNRNPH2P55795 449 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms