RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 FAM87AP0C7U9 286 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 JMJD7P0C870 316 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 ZSCAN22P10073 491 aaPredicted RBP8.08□□□□□ -1.12
HPS4-207ENST00000459918 SFTPCP11686 197 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 NME1P15531 152 aaKnown RBP8.08□□□□□ -1.12
HPS4-207ENST00000459918 CCR1P32246 355 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 NOS2P35228 1153 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 GGCXP38435 758 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 ACADSBP45954 432 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 RABIFP47224 123 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 DNA2P51530 1060 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 NEK3P51956 506 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 INHBCP55103 352 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 YWHAZP63104 245 aaKnown RBP8.08□□□□□ -1.12
HPS4-207ENST00000459918 RPS21P63220 83 aaKnown RBP8.08□□□□□ -1.12
HPS4-207ENST00000459918 DNM1Q05193 864 aaKnown RBP8.08□□□□□ -1.12
HPS4-207ENST00000459918 NME3Q13232 169 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 TCEA2Q15560 299 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 CNGA2Q16280 664 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 ZNF284Q2VY69 593 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 PRRT3Q5FWE3 981 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 COLEC12Q5KU26 742 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 MANEAQ5SRI9 462 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 SYPL2Q5VXT5 272 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 ESRP1Q6NXG1 681 aaKnown RBP8.08□□□□□ -1.12
HPS4-207ENST00000459918 ERN2Q76MJ5 926 aaKnown RBP8.08□□□□□ -1.12
HPS4-207ENST00000459918 SMYD4Q8IYR2 804 aaPredicted RBP8.08□□□□□ -1.12
HPS4-207ENST00000459918 RYBPQ8N488 228 aaPredicted RBP8.08□□□□□ -1.12
HPS4-207ENST00000459918 SH2D3CQ8N5H7 860 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 WDR48Q8TAF3 677 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 FAM174AQ8TBP5 190 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 BTN2A2Q8WVV5 523 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 NAT6Q93015 286 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 SGF29Q96ES7 293 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 IFT43Q96FT9 208 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 SLC39A13Q96H72 371 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 PRR11Q96HE9 360 aaPredicted RBP8.08□□□□□ -1.12
HPS4-207ENST00000459918 MED15Q96RN5 788 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 CCDC3Q9BQI4 270 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 FEM1AQ9BSK4 669 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 C2orf49Q9BVC5 232 aaPredicted RBP8.08□□□□□ -1.12
HPS4-207ENST00000459918 TNKS2Q9H2K2 1166 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.08□□□□□ -1.12
HPS4-207ENST00000459918 DDIT4Q9NX09 232 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 SPASTQ9UBP0 616 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 GULP1Q9UBP9 304 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 APOBEC3BQ9UH17 382 aaKnown RBP8.08□□□□□ -1.12
HPS4-207ENST00000459918 ARMCX3Q9UH62 379 aaPredicted RBP8.08□□□□□ -1.12
HPS4-207ENST00000459918 ATXN7L1Q9ULK2 861 aaPredicted RBP8.08□□□□□ -1.12
HPS4-207ENST00000459918 PCDHGA4Q9Y5G9 962 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 TRPM6Q9BX84 2022 aa8.08□□□□□ -1.12
HPS4-207ENST00000459918 COL27A1Q8IZC6 1860 aaPredicted RBP8.07□□□□□ -1.12
HPS4-207ENST00000459918 LY6G6EA0A0G2JKS1 128 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 POM121BA6NF01 834 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 CDRT15L2A8MXV6 281 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 E5RJQ4 531 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 M0QYT0 321 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 PLD2O14939 933 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 SLC16A3O15427 465 aaKnown RBP8.07□□□□□ -1.12
HPS4-207ENST00000459918 MED7O43513 233 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 PPFIA2O75334 1257 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 PAK4O96013 591 aaPredicted RBP8.07□□□□□ -1.12
HPS4-207ENST00000459918 FYNP06241 537 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 CTSLP07711 333 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 GIMD1P0DJR0 217 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 SRCP12931 536 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 RRM1P23921 792 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 SLC5A2P31639 672 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 MLLT3P42568 568 aaPredicted RBP8.07□□□□□ -1.12
HPS4-207ENST00000459918 PLK1P53350 603 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 ADKP55263 362 aaKnown RBP8.07□□□□□ -1.12
HPS4-207ENST00000459918 LSM11P83369 360 aaKnown RBP eCLIP8.07□□□□□ -1.12
HPS4-207ENST00000459918 CDK17Q00537 523 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 C1orf61Q13536 156 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 PTK2BQ14289 1009 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 FZD2Q14332 565 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 ARL13BQ3SXY8 428 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 CCDC40Q4G0X9 1142 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 PERM1Q5SV97 790 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 ATL3Q6DD88 541 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 CXorf57Q6NSI4 855 aaKnown RBP8.07□□□□□ -1.12
HPS4-207ENST00000459918 KIAA1161Q6NSJ0 714 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 IGF2-ASQ6U949 168 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 LINGO4Q6UY18 593 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 KYAT3Q6YP21 454 aaKnown RBP8.07□□□□□ -1.12
HPS4-207ENST00000459918 RRAGAQ7L523 313 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 RAB11FIP2Q7L804 512 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 ABI3BPQ7Z7G0 1075 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 C14orf80Q86SX3 495 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 FBXO39Q8N4B4 442 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 FAM131CQ96AQ9 280 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 FEM1CQ96JP0 617 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 PPP1R13BQ96KQ4 1090 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 SPATA32Q96LK8 384 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 SLC17A9Q9BYT1 436 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 SLC13A1Q9BZW2 595 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 SIK2Q9H0K1 926 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 SYNCQ9H7C4 482 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 SIRPGQ9P1W8 387 aa8.07□□□□□ -1.12
HPS4-207ENST00000459918 PISDQ9UG56 409 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms