RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 SDR42E2A6NKP2 422 aa24.85■■□□□ 1.57
U2AF1-204ENST00000459639 PRAMEF12O95522 483 aa24.85■■□□□ 1.57
U2AF1-204ENST00000459639 CDH18Q13634 790 aa24.85■■□□□ 1.57
U2AF1-204ENST00000459639 RFTN1Q14699 578 aaPredicted RBP24.85■■□□□ 1.57
U2AF1-204ENST00000459639 ZNF77Q15935 545 aa24.85■■□□□ 1.57
U2AF1-204ENST00000459639 RNF43Q68DV7 783 aa24.85■■□□□ 1.57
U2AF1-204ENST00000459639 TMC5Q6UXY8 1006 aa24.85■■□□□ 1.57
U2AF1-204ENST00000459639 ING5Q8WYH8 240 aa24.85■■□□□ 1.57
U2AF1-204ENST00000459639 CENPHQ9H3R5 247 aa24.85■■□□□ 1.57
U2AF1-204ENST00000459639 PPCSQ9HAB8 311 aa24.85■■□□□ 1.57
U2AF1-204ENST00000459639 UBA2Q9UBT2 640 aaPredicted RBP24.85■■□□□ 1.57
U2AF1-204ENST00000459639 ZC3H7BQ9UGR2 993 aaKnown RBP24.85■■□□□ 1.57
U2AF1-204ENST00000459639 WEE1P30291 646 aa24.84■■□□□ 1.57
U2AF1-204ENST00000459639 LONRF1Q17RB8 773 aa24.84■■□□□ 1.57
U2AF1-204ENST00000459639 CCNJLQ8IV13 435 aa24.84■■□□□ 1.57
U2AF1-204ENST00000459639 BBS5Q8N3I7 341 aa24.84■■□□□ 1.57
U2AF1-204ENST00000459639 OR52K1Q8NGK4 314 aa24.84■■□□□ 1.57
U2AF1-204ENST00000459639 SPATA22Q8NHS9 363 aa24.84■■□□□ 1.57
U2AF1-204ENST00000459639 IMP4Q96G21 291 aaKnown RBP24.84■■□□□ 1.57
U2AF1-204ENST00000459639 EXOC1LA0A1B0GW35 172 aa24.83■■□□□ 1.57
U2AF1-204ENST00000459639 TLDC2A0PJX2 215 aa24.83■■□□□ 1.57
U2AF1-204ENST00000459639 RFXAPO00287 272 aa24.83■■□□□ 1.57
U2AF1-204ENST00000459639 CYBBP04839 570 aa24.83■■□□□ 1.57
U2AF1-204ENST00000459639 SESN2P58004 480 aaPredicted RBP24.83■■□□□ 1.57
U2AF1-204ENST00000459639 MPP3Q13368 585 aa24.83■■□□□ 1.57
U2AF1-204ENST00000459639 ZNF235Q14590 738 aa24.83■■□□□ 1.57
U2AF1-204ENST00000459639 MFN1Q8IWA4 741 aa24.83■■□□□ 1.57
U2AF1-204ENST00000459639 MPP5Q8N3R9 675 aa24.83■■□□□ 1.57
U2AF1-204ENST00000459639 RIN3Q8TB24 985 aa24.83■■□□□ 1.57
U2AF1-204ENST00000459639 ITFG1Q8TB96 612 aa24.83■■□□□ 1.57
U2AF1-204ENST00000459639 STAMBPL1Q96FJ0 436 aa24.83■■□□□ 1.57
U2AF1-204ENST00000459639 CFAP36Q96G28 342 aa24.83■■□□□ 1.57
U2AF1-204ENST00000459639 ZSWIM3Q96MP5 696 aa24.83■■□□□ 1.57
U2AF1-204ENST00000459639 NAT9Q9BTE0 207 aa24.83■■□□□ 1.57
U2AF1-204ENST00000459639 ACSS3Q9H6R3 686 aa24.83■■□□□ 1.57
U2AF1-204ENST00000459639 KIF9Q9HAQ2 790 aa24.83■■□□□ 1.57
U2AF1-204ENST00000459639 VPS45Q9NRW7 570 aa24.83■■□□□ 1.57
U2AF1-204ENST00000459639 UBP1Q9NZI7 540 aa24.83■■□□□ 1.57
U2AF1-204ENST00000459639 VPS18Q9P253 973 aa24.83■■□□□ 1.57
U2AF1-204ENST00000459639 TBC1D14Q9P2M4 693 aa24.83■■□□□ 1.57
U2AF1-204ENST00000459639 FETUBQ9UGM5 382 aa24.83■■□□□ 1.57
U2AF1-204ENST00000459639 RABGEF1Q9UJ41 708 aa24.83■■□□□ 1.57
U2AF1-204ENST00000459639 MAD1L1Q9Y6D9 718 aa24.83■■□□□ 1.57
U2AF1-204ENST00000459639 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.82■■□□□ 1.56
U2AF1-204ENST00000459639 SMIM23A6NLE4 172 aa24.82■■□□□ 1.56
U2AF1-204ENST00000459639 RRP9O43818 475 aaKnown RBP24.82■■□□□ 1.56
U2AF1-204ENST00000459639 USP12O75317 370 aa24.82■■□□□ 1.56
U2AF1-204ENST00000459639 MT-CYBP00156 380 aaPredicted RBP24.82■■□□□ 1.56
U2AF1-204ENST00000459639 MGAT1P26572 445 aa24.82■■□□□ 1.56
U2AF1-204ENST00000459639 FSCBQ5H9T9 825 aa24.82■■□□□ 1.56
U2AF1-204ENST00000459639 TMEM184AQ6ZMB5 413 aa24.82■■□□□ 1.56
U2AF1-204ENST00000459639 CCDC117Q8IWD4 279 aaPredicted RBP24.82■■□□□ 1.56
U2AF1-204ENST00000459639 PGBD5Q8N414 524 aa24.82■■□□□ 1.56
U2AF1-204ENST00000459639 RIBC1Q8N443 379 aaPredicted RBP24.82■■□□□ 1.56
U2AF1-204ENST00000459639 TBL1YQ9BQ87 522 aa24.82■■□□□ 1.56
U2AF1-204ENST00000459639 POLR1EQ9GZS1 481 aaKnown RBP24.82■■□□□ 1.56
U2AF1-204ENST00000459639 NSUN3Q9H649 340 aaKnown RBP24.82■■□□□ 1.56
U2AF1-204ENST00000459639 SEPT3Q9UH03 358 aa24.82■■□□□ 1.56
U2AF1-204ENST00000459639 RGS16O15492 202 aaPredicted RBP24.81■■□□□ 1.56
U2AF1-204ENST00000459639 STX2P32856 288 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 SLCO1A2P46721 670 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 CDH17Q12864 832 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 OLIG2Q13516 323 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 KLHL38Q2WGJ6 581 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 KCTD16Q68DU8 428 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 ALG1LQ6GMV1 187 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 TPGS1Q6ZTW0 290 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 ARID3BQ8IVW6 561 aaPredicted RBP24.81■■□□□ 1.56
U2AF1-204ENST00000459639 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP24.81■■□□□ 1.56
U2AF1-204ENST00000459639 DNAAF3Q8N9W5 541 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 FBF1Q8TES7 1133 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 FEM1AQ9BSK4 669 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 STMN4Q9H169 189 aaPredicted RBP24.81■■□□□ 1.56
U2AF1-204ENST00000459639 BFARQ9NZS9 450 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 OR51B4Q9Y5P0 310 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 TRANK1O15050 2925 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 CBX4O00257 560 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 POLR3GO15318 223 aaPredicted RBP24.81■■□□□ 1.56
U2AF1-204ENST00000459639 CDH16O75309 829 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 GLDCP23378 1020 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 ADRA1AP35348 466 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 NPY2RP49146 381 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 MAXP61244 160 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 ITKQ08881 620 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 STEAP4Q687X5 459 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 KDELC1Q6UW63 502 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 LEKR1Q6ZMV7 388 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 UNC5AQ6ZN44 842 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 PRPF39Q86UA1 669 aaKnown RBP24.81■■□□□ 1.56
U2AF1-204ENST00000459639 TDRPQ86YL5 185 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 KIAA1958Q8N8K9 716 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 DCAF4L2Q8NA75 395 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 IPMKQ8NFU5 416 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 WFDC5Q8TCV5 224 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 TLCD1Q96CP7 247 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 OTUB2Q96DC9 234 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 XPO6Q96QU8 1125 aaKnown RBP24.81■■□□□ 1.56
U2AF1-204ENST00000459639 IGFLR1Q9H665 355 aa24.81■■□□□ 1.56
U2AF1-204ENST00000459639 PIH1D1Q9NWS0 290 aaKnown RBP24.81■■□□□ 1.56
U2AF1-204ENST00000459639 SYBUQ9NX95 663 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms