RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 SPATA6LQ8N4H0 392 aa10.47□□□□□ -0.73
CLIP4-208ENST00000456385 SLC15A4Q8N697 577 aa10.47□□□□□ -0.73
CLIP4-208ENST00000456385 HMGCLL1Q8TB92 370 aa10.47□□□□□ -0.73
CLIP4-208ENST00000456385 SREK1Q8WXA9 508 aaKnown RBP10.47□□□□□ -0.73
CLIP4-208ENST00000456385 KHSRPQ92945 711 aaKnown RBP eCLIP10.47□□□□□ -0.73
CLIP4-208ENST00000456385 ISL2Q96A47 359 aa10.47□□□□□ -0.73
CLIP4-208ENST00000456385 ANKRD36BP1Q96IX9 119 aa10.47□□□□□ -0.73
CLIP4-208ENST00000456385 TMEM134Q9H6X4 195 aa10.47□□□□□ -0.73
CLIP4-208ENST00000456385 TRPC7Q9HCX4 862 aa10.47□□□□□ -0.73
CLIP4-208ENST00000456385 ZNF302Q9NR11 478 aa10.47□□□□□ -0.73
CLIP4-208ENST00000456385 CNTNAP1P78357 1384 aa10.47□□□□□ -0.73
CLIP4-208ENST00000456385 TCRBV3S1A0A5B6 114 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 SOBPA7XYQ1 873 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 ZNF701M0R085 212 aaPredicted RBP10.46□□□□□ -0.73
CLIP4-208ENST00000456385 TRIM24O15164 1050 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 SLC22A2O15244 555 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 PHGDHO43175 533 aaKnown RBP10.46□□□□□ -0.73
CLIP4-208ENST00000456385 PFKMP08237 780 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 CXCL8P10145 99 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 GOT1P17174 413 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 CDH3P22223 829 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 SDC4P31431 198 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 AVPR1AP37288 418 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 YAP1P46937 504 aaKnown RBP10.46□□□□□ -0.73
CLIP4-208ENST00000456385 TMED10P49755 219 aaKnown RBP10.46□□□□□ -0.73
CLIP4-208ENST00000456385 EIF2B2P49770 351 aaKnown RBP10.46□□□□□ -0.73
CLIP4-208ENST00000456385 FKBP1AP62942 108 aaKnown RBP10.46□□□□□ -0.73
CLIP4-208ENST00000456385 NAB1Q13506 487 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 DGKDQ16760 1214 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 LIPMQ5VYY2 423 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 EGFLAMQ63HQ2 1017 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 NCBP2-AS2Q69YL0 99 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 PMF1Q6P1K2 205 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 ZPBP2Q6X784 338 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 TRIM50Q86XT4 487 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 SPNS2Q8IVW8 549 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 OFCC1Q8IZS5 231 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 C1orf127Q8N9H9 656 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 OR52K1Q8NGK4 314 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 ADAMTS16Q8TE57 1224 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 CHPT1Q8WUD6 406 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 FAM151AQ8WW52 585 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 ZNF669Q96BR6 464 aaPredicted RBP10.46□□□□□ -0.73
CLIP4-208ENST00000456385 MFSD3Q96ES6 412 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 FBXL20Q96IG2 436 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 CSPG4P5Q96PW8 444 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 MRPL4Q9BYD3 311 aaKnown RBP10.46□□□□□ -0.73
CLIP4-208ENST00000456385 POLR1BQ9H9Y6 1135 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 CACNA2D2Q9NY47 1150 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 CCDC167Q9P0B6 97 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 KIAA1522Q9P206 1035 aaPredicted RBP10.46□□□□□ -0.73
CLIP4-208ENST00000456385 TSPAN16Q9UKR8 245 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 SLC39A10Q9ULF5 831 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 FADS3Q9Y5Q0 445 aa10.46□□□□□ -0.73
CLIP4-208ENST00000456385 RNF103O00237 685 aa10.46□□□□□ -0.74
CLIP4-208ENST00000456385 MDM4O15151 490 aa10.46□□□□□ -0.74
CLIP4-208ENST00000456385 TPST1O60507 370 aa10.46□□□□□ -0.74
CLIP4-208ENST00000456385 SULT1C4O75897 302 aa10.46□□□□□ -0.74
CLIP4-208ENST00000456385 ITGB3P05106 788 aa10.46□□□□□ -0.74
CLIP4-208ENST00000456385 NFICP08651 508 aa10.46□□□□□ -0.74
CLIP4-208ENST00000456385 DCKP27707 260 aa10.46□□□□□ -0.74
CLIP4-208ENST00000456385 GRIA3P42263 894 aa10.46□□□□□ -0.74
CLIP4-208ENST00000456385 GJA8P48165 433 aa10.46□□□□□ -0.74
CLIP4-208ENST00000456385 CD151P48509 253 aa10.46□□□□□ -0.74
CLIP4-208ENST00000456385 TNK2Q07912 1038 aa10.46□□□□□ -0.74
CLIP4-208ENST00000456385 TRAF2Q12933 501 aa10.46□□□□□ -0.74
CLIP4-208ENST00000456385 PRKAA1Q13131 559 aa10.46□□□□□ -0.74
CLIP4-208ENST00000456385 ITGADQ13349 1161 aa10.46□□□□□ -0.74
CLIP4-208ENST00000456385 LRP8Q14114 963 aa10.46□□□□□ -0.74
CLIP4-208ENST00000456385 NR1D2Q14995 579 aa10.46□□□□□ -0.74
CLIP4-208ENST00000456385 LRRC8EQ6NSJ5 796 aa10.46□□□□□ -0.74
CLIP4-208ENST00000456385 OLFML1Q6UWY5 402 aa10.46□□□□□ -0.74
CLIP4-208ENST00000456385 EPHX4Q8IUS5 362 aa10.46□□□□□ -0.74
CLIP4-208ENST00000456385 ZC3H7AQ8IWR0 971 aaKnown RBP10.46□□□□□ -0.74
CLIP4-208ENST00000456385 SLC7A14Q8TBB6 771 aa10.46□□□□□ -0.74
CLIP4-208ENST00000456385 DCPSQ96C86 337 aaKnown RBP10.46□□□□□ -0.74
CLIP4-208ENST00000456385 KCTD15Q96SI1 283 aaPredicted RBP10.46□□□□□ -0.74
CLIP4-208ENST00000456385 UHRF1Q96T88 793 aaPredicted RBP10.46□□□□□ -0.74
CLIP4-208ENST00000456385 OMDQ99983 421 aa10.46□□□□□ -0.74
CLIP4-208ENST00000456385 MAF1Q9H063 256 aa10.46□□□□□ -0.74
CLIP4-208ENST00000456385 UNC93B1Q9H1C4 597 aa10.46□□□□□ -0.74
CLIP4-208ENST00000456385 GBA2Q9HCG7 927 aaPredicted RBP10.46□□□□□ -0.74
CLIP4-208ENST00000456385 TUBA8Q9NY65 449 aaPredicted RBP10.46□□□□□ -0.74
CLIP4-208ENST00000456385 MAP3K20Q9NYL2 800 aaKnown RBP10.46□□□□□ -0.74
CLIP4-208ENST00000456385 GGA3Q9NZ52 723 aa10.46□□□□□ -0.74
CLIP4-208ENST00000456385 ZNF70Q9UC06 446 aaPredicted RBP10.46□□□□□ -0.74
CLIP4-208ENST00000456385 FAM32AQ9Y421 112 aaKnown RBP10.46□□□□□ -0.74
CLIP4-208ENST00000456385 CTDP1Q9Y5B0 961 aaPredicted RBP10.46□□□□□ -0.74
CLIP4-208ENST00000456385 SNX9Q9Y5X1 595 aa10.46□□□□□ -0.74
CLIP4-208ENST00000456385 LY75O60449 1722 aa10.45□□□□□ -0.74
CLIP4-208ENST00000456385 CCDC78A2IDD5 438 aa10.45□□□□□ -0.74
CLIP4-208ENST00000456385 HEATR9A2RTY3 570 aa10.45□□□□□ -0.74
CLIP4-208ENST00000456385 MAFGO15525 162 aa10.45□□□□□ -0.74
CLIP4-208ENST00000456385 B4GALT5O43286 388 aa10.45□□□□□ -0.74
CLIP4-208ENST00000456385 MPOP05164 745 aa10.45□□□□□ -0.74
CLIP4-208ENST00000456385 ADSLP30566 484 aaPredicted RBP10.45□□□□□ -0.74
CLIP4-208ENST00000456385 GALNT2Q10471 571 aa10.45□□□□□ -0.74
CLIP4-208ENST00000456385 NEDD8Q15843 81 aa10.45□□□□□ -0.74
CLIP4-208ENST00000456385 ZYG11AQ6WRX3 759 aa10.45□□□□□ -0.74
CLIP4-208ENST00000456385 TP53INP2Q8IXH6 220 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms