RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.73□□□□□ -1.65
LINC00393-202ENST00000452852 CNTROBQ8N137 903 aa4.73□□□□□ -1.65
LINC00393-202ENST00000452852 FAM109AQ8N4B1 249 aa4.73□□□□□ -1.65
LINC00393-202ENST00000452852 METTL25Q8N6Q8 603 aa4.73□□□□□ -1.65
LINC00393-202ENST00000452852 SLC22A17Q8WUG5 538 aa4.73□□□□□ -1.65
LINC00393-202ENST00000452852 FAM136AQ96C01 138 aa4.73□□□□□ -1.65
LINC00393-202ENST00000452852 KTI12Q96EK9 354 aaPredicted RBP4.73□□□□□ -1.65
LINC00393-202ENST00000452852 APOPT1Q96IL0 206 aa4.73□□□□□ -1.65
LINC00393-202ENST00000452852 ZNF668Q96K58 619 aaPredicted RBP4.73□□□□□ -1.65
LINC00393-202ENST00000452852 TREX2Q9BQ50 279 aaPredicted RBP4.73□□□□□ -1.65
LINC00393-202ENST00000452852 NUDT22Q9BRQ3 303 aa4.73□□□□□ -1.65
LINC00393-202ENST00000452852 ACTRT3Q9BYD9 372 aa4.73□□□□□ -1.65
LINC00393-202ENST00000452852 VPS33BQ9H267 617 aa4.73□□□□□ -1.65
LINC00393-202ENST00000452852 KLK15Q9H2R5 256 aa4.73□□□□□ -1.65
LINC00393-202ENST00000452852 SEMA4GQ9NTN9 838 aa4.73□□□□□ -1.65
LINC00393-202ENST00000452852 LIN7CQ9NUP9 197 aaKnown RBP4.73□□□□□ -1.65
LINC00393-202ENST00000452852 ASB6Q9NWX5 421 aa4.73□□□□□ -1.65
LINC00393-202ENST00000452852 SLC17A6Q9P2U8 582 aa4.73□□□□□ -1.65
LINC00393-202ENST00000452852 TRMT112Q9UI30 125 aaKnown RBP4.73□□□□□ -1.65
LINC00393-202ENST00000452852 CAMK2AQ9UQM7 478 aa4.73□□□□□ -1.65
LINC00393-202ENST00000452852 NAALADL1Q9UQQ1 740 aa4.73□□□□□ -1.65
LINC00393-202ENST00000452852 ATP6V0A2Q9Y487 856 aa4.73□□□□□ -1.65
LINC00393-202ENST00000452852 COX11Q9Y6N1 276 aa4.73□□□□□ -1.65
LINC00393-202ENST00000452852 SPEF2Q9C093 1822 aa4.73□□□□□ -1.65
LINC00393-202ENST00000452852 ABCC4O15439 1325 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 SH3TC1Q8TE82 1336 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 PASKQ96RG2 1323 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 SLC38A8A6NNN8 435 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 LINC00473A8K010 186 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 ORC4O43929 436 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 TSPAN3O60637 253 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 CBFA2T3O75081 653 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 BBOX1O75936 387 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 IGLV2-14P01704 120 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 ERBB2P04626 1255 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 PDHA1P08559 390 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 CTCFP49711 727 aaPredicted RBP4.72□□□□□ -1.65
LINC00393-202ENST00000452852 FAM3BP58499 235 aaPredicted RBP4.72□□□□□ -1.65
LINC00393-202ENST00000452852 CALD1Q05682 793 aaKnown RBP4.72□□□□□ -1.65
LINC00393-202ENST00000452852 RNASELQ05823 741 aaKnown RBP4.72□□□□□ -1.65
LINC00393-202ENST00000452852 GPR68Q15743 365 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 BAK1Q16611 211 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 PROSER3Q2NL68 480 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 ZNF569Q5MCW4 686 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 SLC10A5Q5PT55 438 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 CERCAMQ5T4B2 595 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 FAM69AQ5T7M9 428 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 ICE2Q659A1 982 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 TTLL5Q6EMB2 1281 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 DGAT2L7PQ6IED9 249 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 ANO7Q6IWH7 933 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 PIK3AP1Q6ZUJ8 805 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 USP50Q70EL3 339 aaPredicted RBP4.72□□□□□ -1.65
LINC00393-202ENST00000452852 H1FNTQ75WM6 255 aaPredicted RBP4.72□□□□□ -1.65
LINC00393-202ENST00000452852 FAM71DQ8N9W8 422 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 ADAMTS15Q8TE58 950 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 NTN5Q8WTR8 489 aaPredicted RBP4.72□□□□□ -1.65
LINC00393-202ENST00000452852 ATRIPQ8WXE1 791 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 FKBP10Q96AY3 582 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 WDR24Q96S15 920 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 C17orf80Q9BSJ5 609 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 HERC2P3Q9BVR0 1158 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 ADARB2Q9NS39 739 aaKnown RBP4.72□□□□□ -1.65
LINC00393-202ENST00000452852 HAUS2Q9NVX0 235 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 PTGFRNQ9P2B2 879 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 DKK3Q9UBP4 350 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 DBF4Q9UBU7 674 aaPredicted RBP4.72□□□□□ -1.65
LINC00393-202ENST00000452852 TBC1D29Q9UFV1 150 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 RAB21Q9UL25 225 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 RIMKLBQ9ULI2 386 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 RCE1Q9Y256 329 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 TTLL3Q9Y4R7 772 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 SNED1Q8TER0 1413 aa4.72□□□□□ -1.65
LINC00393-202ENST00000452852 CACNA1FO60840 1977 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 COL4A5P29400 1685 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 SYNDIG1LA6NDD5 238 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 AGAP5A6NIR3 686 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 H3BNC9 293 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 PEX12O00623 359 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 PPM1DO15297 605 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 C1QL1O75973 258 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 HEXIM1O94992 359 aaKnown RBP4.71□□□□□ -1.66
LINC00393-202ENST00000452852 LARGE1O95461 756 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 HOXB7P09629 217 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 NR2F6P10588 404 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 DRD1P21728 446 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 EPHA3P29320 983 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 THBS4P35443 961 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 HOXD12P35452 270 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 ACTN2P35609 894 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 STAT1P42224 750 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 GSTM5P46439 218 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 PDE6CP51160 858 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 ELLP55199 621 aaPredicted RBP4.71□□□□□ -1.66
LINC00393-202ENST00000452852 RPP30P78346 268 aaKnown RBP4.71□□□□□ -1.66
LINC00393-202ENST00000452852 SETQ01105 290 aaPredicted RBP4.71□□□□□ -1.66
LINC00393-202ENST00000452852 MAP2K1Q02750 393 aaPredicted RBP4.71□□□□□ -1.66
LINC00393-202ENST00000452852 GRAPQ13588 217 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 TNIP1Q15025 636 aa4.71□□□□□ -1.66
LINC00393-202ENST00000452852 NFIL3Q16649 462 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms