RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 ENPP3O14638 875 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 HCRTO43612 131 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 ADRA1DP25100 572 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 SERPINB4P48594 390 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 YBEYP58557 167 aaPredicted RBP7.51□□□□□ -1.21
SYNE1-213ENST00000448038 AUHQ13825 339 aaKnown RBP7.51□□□□□ -1.21
SYNE1-213ENST00000448038 GALNT3Q14435 633 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 SPDYE7PQ495Y7 208 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 UNC5AQ6ZN44 842 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 STK40Q8N2I9 435 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 BORCS6Q96GS4 357 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 FIZ1Q96SL8 496 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 EBNA1BP2Q99848 306 aaKnown RBP7.51□□□□□ -1.21
SYNE1-213ENST00000448038 SLC4A5Q9BY07 1137 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 SDCBP2Q9H190 292 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 COG4Q9H9E3 785 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 NMRAL1Q9HBL8 299 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 BPIFA1Q9NP55 256 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 MAST2Q6P0Q8 1798 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 C1orf232A0A0U1RR37 186 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 RBM47A0AV96 593 aaKnown RBP7.51□□□□□ -1.21
SYNE1-213ENST00000448038 PDZK1P1A8MUH7 402 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 PHGDHO43175 533 aaKnown RBP7.51□□□□□ -1.21
SYNE1-213ENST00000448038 AVILO75366 819 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 MYBL2P10244 700 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 CES1P23141 567 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 GATMP50440 423 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 ARHGDIAP52565 204 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 ITGA9Q13797 1035 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 CCDC153Q494R4 210 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 DOK6Q6PKX4 331 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 B3GNT9Q6UX72 402 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 CHPFQ8IZ52 775 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 OR6K2Q8NGY2 324 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 CXorf38Q8TB03 319 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 PGM2Q96G03 612 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 SLC9A7Q96T83 725 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 GAS2L1Q99501 681 aaPredicted RBP7.51□□□□□ -1.21
SYNE1-213ENST00000448038 BRD9Q9H8M2 597 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 PGAP2Q9UHJ9 254 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 FAM50BQ9Y247 325 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 MYH4Q9Y623 1939 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 TULP2O00295 520 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 PFKMP08237 780 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 HOXB8P17481 243 aaPredicted RBP7.51□□□□□ -1.21
SYNE1-213ENST00000448038 CTPS1P17812 591 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 KCNK10P57789 538 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 SULT2A1Q06520 285 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 GPM6BQ13491 265 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.51□□□□□ -1.21
SYNE1-213ENST00000448038 SYPL2Q5VXT5 272 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 SEL1L3Q68CR1 1132 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 TMEM110Q86TL2 294 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 NKD2Q969F2 451 aaPredicted RBP7.51□□□□□ -1.21
SYNE1-213ENST00000448038 C1QTNF7Q9BXJ2 289 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 FZD10Q9ULW2 581 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 PIRO00625 290 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 CHRNA1P02708 482 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 SHBGP04278 402 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 KCNA4P22459 653 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 DNAL1Q4LDG9 190 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 TEDDM1Q5T9Z0 273 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 PKN3Q6P5Z2 889 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 CXorf40AQ8TE69 158 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 GBP5Q96PP8 586 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 TRIM45Q9H8W5 580 aaPredicted RBP7.51□□□□□ -1.21
SYNE1-213ENST00000448038 SYBUQ9NX95 663 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 DEC1Q9P2X7 70 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 HEY2Q9UBP5 337 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 ANKRD6Q9Y2G4 727 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 DYRK1BQ9Y463 629 aa7.51□□□□□ -1.21
SYNE1-213ENST00000448038 ZFP37Q9Y6Q3 630 aaPredicted RBP7.51□□□□□ -1.21
SYNE1-213ENST00000448038 A0A1B0GVM2 712 aa7.5□□□□□ -1.21
SYNE1-213ENST00000448038 TCAF2A6NFQ2 919 aa7.5□□□□□ -1.21
SYNE1-213ENST00000448038 RASSF10A6NK89 507 aa7.5□□□□□ -1.21
SYNE1-213ENST00000448038 CCT8L1PA6NM43 557 aa7.5□□□□□ -1.21
SYNE1-213ENST00000448038 B2RBV5 119 aa7.5□□□□□ -1.21
SYNE1-213ENST00000448038 GRM6O15303 877 aa7.5□□□□□ -1.21
SYNE1-213ENST00000448038 RAD51BO15315 384 aa7.5□□□□□ -1.21
SYNE1-213ENST00000448038 DGKIO75912 1065 aa7.5□□□□□ -1.21
SYNE1-213ENST00000448038 FGF1P05230 155 aa7.5□□□□□ -1.21
SYNE1-213ENST00000448038 CYP2A7P20853 494 aa7.5□□□□□ -1.21
SYNE1-213ENST00000448038 FBXO46Q6PJ61 603 aaPredicted RBP7.5□□□□□ -1.21
SYNE1-213ENST00000448038 AGMOQ6ZNB7 445 aa7.5□□□□□ -1.21
SYNE1-213ENST00000448038 DNAJB7Q7Z6W7 309 aaPredicted RBP7.5□□□□□ -1.21
SYNE1-213ENST00000448038 C11orf96Q7Z7L8 435 aa7.5□□□□□ -1.21
SYNE1-213ENST00000448038 SETD3Q86TU7 594 aaPredicted RBP7.5□□□□□ -1.21
SYNE1-213ENST00000448038 FBXO6Q9NRD1 293 aaPredicted RBP7.5□□□□□ -1.21
SYNE1-213ENST00000448038 SPASTQ9UBP0 616 aa7.5□□□□□ -1.21
SYNE1-213ENST00000448038 BCLAF3A2AJT9 711 aaKnown RBP7.5□□□□□ -1.21
SYNE1-213ENST00000448038 SASH3O75995 380 aa7.5□□□□□ -1.21
SYNE1-213ENST00000448038 HLA-DPA1P20036 260 aa7.5□□□□□ -1.21
SYNE1-213ENST00000448038 HALP42357 657 aa7.5□□□□□ -1.21
SYNE1-213ENST00000448038 RAP1GDS1P52306 607 aa7.5□□□□□ -1.21
SYNE1-213ENST00000448038 CYP4F8P98187 520 aa7.5□□□□□ -1.21
SYNE1-213ENST00000448038 INCA1Q0VD86 236 aa7.5□□□□□ -1.21
SYNE1-213ENST00000448038 PLCL1Q15111 1095 aa7.5□□□□□ -1.21
SYNE1-213ENST00000448038 KRT80Q6KB66 452 aa7.5□□□□□ -1.21
SYNE1-213ENST00000448038 OTOP3Q7RTS5 596 aa7.5□□□□□ -1.21
SYNE1-213ENST00000448038 IFNEQ86WN2 208 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms