RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 KIAA1217Q5T5P2 1943 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 TTC3P53804 2025 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 SYN3O14994 580 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 UBDO15205 165 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 LAYNQ6UX15 382 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 RBFAQ8N0V3 343 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 MTMR9Q96QG7 549 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 BATF3Q9NR55 127 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 BTN3A1O00481 513 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 SERPINB1P30740 379 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 SLC1A6P48664 564 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 C16orf59Q7L2K0 433 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 HPS4Q9NQG7 708 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 PCDHA11Q9Y5I1 949 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 CHURC1-FNTBB4DL54 471 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 RECQL5O94762 991 aaPredicted RBP11.86□□□□□ -0.51
FN1-212ENST00000446046 UMPSP11172 480 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 LSM12Q3MHD2 195 aaKnown RBP11.86□□□□□ -0.51
FN1-212ENST00000446046 USP49Q70CQ1 688 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 DEFB106AQ8N104 65 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 C19orf18Q8NEA5 215 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 CAPNS2Q96L46 248 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 PHPT1Q9NRX4 125 aaPredicted RBP11.86□□□□□ -0.51
FN1-212ENST00000446046 ANAPC2Q9UJX6 822 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 NDUFAF1Q9Y375 327 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 ANKRD36CQ5JPF3 1778 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 HSD17B3P37058 310 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 RAB14P61106 215 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 DSG1Q02413 1049 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 TRIP10Q15642 601 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 ARMCX4Q5H9R4 360 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 TATDN1Q6P1N9 297 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 PAFAH2Q99487 392 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 FAM118BQ9BPY3 351 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 POLMQ9NP87 494 aaPredicted RBP11.86□□□□□ -0.51
FN1-212ENST00000446046 ERVW-1Q9UQF0 538 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 ABCB1P08183 1280 aaPredicted RBP11.86□□□□□ -0.51
FN1-212ENST00000446046 LPOP22079 712 aaPredicted RBP11.86□□□□□ -0.51
FN1-212ENST00000446046 ITGA1P56199 1179 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 PPP2R2DQ66LE6 453 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 PMF1Q6P1K2 205 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 TCAIMQ8N3R3 496 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 AVL9Q8NBF6 648 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 SGF29Q96ES7 293 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 RPS6KA6Q9UK32 745 aa11.86□□□□□ -0.51
FN1-212ENST00000446046 DDX60Q8IY21 1712 aaKnown RBP11.86□□□□□ -0.51
FN1-212ENST00000446046 LRRC72A6NJI9 287 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 CCT8L1PA6NM43 557 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 INPP4BO15327 924 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 PTGES3Q15185 160 aaKnown RBP11.85□□□□□ -0.51
FN1-212ENST00000446046 KATNAL2Q8IYT4 538 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 CYP4X1Q8N118 509 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 GALNT4Q8N4A0 578 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 MTERF3Q96E29 417 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 MAGED4Q96JG8 741 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 GPR88Q9GZN0 384 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 TCF7L2Q9NQB0 619 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 ATG2BQ96BY7 2078 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 GTPBP1O00178 669 aaKnown RBP11.85□□□□□ -0.51
FN1-212ENST00000446046 TRIM13O60858 407 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 DGKIO75912 1065 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 KCNH1O95259 989 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 PTPN9P43378 593 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 SCNN1GP51170 649 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 NDUFAF6Q330K2 333 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 TMEM26Q6ZUK4 368 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 SVOPQ8N4V2 548 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 SETD9Q8NE22 299 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 APOL2Q9BQE5 337 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 C10orf88Q9H8K7 445 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 DEC1Q9P2X7 70 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 USP20Q9Y2K6 914 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 TRAF2Q12933 501 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 TXNDC11Q6PKC3 985 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 KCNT2Q6UVM3 1135 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 MFSD7Q6UXD7 560 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 PACSIN1Q9BY11 444 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 SEMA6BQ9H3T3 888 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 PPIEQ9UNP9 301 aaKnown RBP11.85□□□□□ -0.51
FN1-212ENST00000446046 LZTS1Q9Y250 596 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 MIA3Q5JRA6 1907 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 PDE9AO76083 593 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 FASP25445 335 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 PARP15Q460N3 678 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 PCID2Q5JVF3 399 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 LEMD2Q8NC56 503 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 PHF21BQ96EK2 531 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 RIBC2Q9H4K1 309 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 A0A0A0MRY4 1105 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 TLR5O60602 858 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 FEN1P39748 380 aaKnown RBP11.85□□□□□ -0.51
FN1-212ENST00000446046 RPP38P78345 283 aaKnown RBP11.85□□□□□ -0.51
FN1-212ENST00000446046 ACSM2AQ08AH3 577 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 ACSM2BQ68CK6 577 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 GET4Q7L5D6 327 aaPredicted RBP11.85□□□□□ -0.51
FN1-212ENST00000446046 FAM220AQ7Z4H9 259 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 TRPC4APQ8TEL6 797 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 CELF6Q96J87 481 aaKnown RBP11.85□□□□□ -0.51
FN1-212ENST00000446046 SPATA13Q96N96 652 aa11.85□□□□□ -0.51
FN1-212ENST00000446046 ULBP1Q9BZM6 244 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms