RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 CAPN8A6NHC0 703 aa14.11□□□□□ -0.15
PTPRE-203ENST00000442830 CBX4O00257 560 aa14.11□□□□□ -0.15
PTPRE-203ENST00000442830 AP1G1O43747 822 aa14.11□□□□□ -0.15
PTPRE-203ENST00000442830 PCDH8O95206 1070 aa14.11□□□□□ -0.15
PTPRE-203ENST00000442830 DGKAP23743 735 aa14.11□□□□□ -0.15
PTPRE-203ENST00000442830 CLCN1P35523 988 aa14.11□□□□□ -0.15
PTPRE-203ENST00000442830 METAP1P53582 386 aa14.11□□□□□ -0.15
PTPRE-203ENST00000442830 TAS2R38P59533 333 aa14.11□□□□□ -0.15
PTPRE-203ENST00000442830 SEMG2Q02383 582 aa14.11□□□□□ -0.15
PTPRE-203ENST00000442830 ZNF284Q2VY69 593 aa14.11□□□□□ -0.15
PTPRE-203ENST00000442830 FAM102AQ5T9C2 384 aaPredicted RBP14.11□□□□□ -0.15
PTPRE-203ENST00000442830 ABI3BPQ7Z7G0 1075 aa14.11□□□□□ -0.15
PTPRE-203ENST00000442830 SLC47A2Q86VL8 602 aa14.11□□□□□ -0.15
PTPRE-203ENST00000442830 ERICH1Q86X53 443 aa14.11□□□□□ -0.15
PTPRE-203ENST00000442830 MARCH9Q86YJ5 346 aa14.11□□□□□ -0.15
PTPRE-203ENST00000442830 PLPP6Q8IY26 295 aa14.11□□□□□ -0.15
PTPRE-203ENST00000442830 FAM181AQ8N9Y4 354 aa14.11□□□□□ -0.15
PTPRE-203ENST00000442830 OR52K2Q8NGK3 314 aa14.11□□□□□ -0.15
PTPRE-203ENST00000442830 RAB7BQ96AH8 199 aa14.11□□□□□ -0.15
PTPRE-203ENST00000442830 GRAMD1AQ96CP6 724 aa14.11□□□□□ -0.15
PTPRE-203ENST00000442830 ARHGEF26Q96DR7 871 aa14.11□□□□□ -0.15
PTPRE-203ENST00000442830 FEM1CQ96JP0 617 aa14.11□□□□□ -0.15
PTPRE-203ENST00000442830 DEPDC7Q96QD5 511 aa14.11□□□□□ -0.15
PTPRE-203ENST00000442830 PSMB7Q99436 277 aa14.11□□□□□ -0.15
PTPRE-203ENST00000442830 PPARGC1AQ9UBK2 798 aaKnown RBP14.11□□□□□ -0.15
PTPRE-203ENST00000442830 FOXN3O00409 490 aaPredicted RBP14.1□□□□□ -0.15
PTPRE-203ENST00000442830 SLC31A1O15431 190 aa14.1□□□□□ -0.15
PTPRE-203ENST00000442830 SIGLEC6O43699 453 aa14.1□□□□□ -0.15
PTPRE-203ENST00000442830 CNTN5O94779 1100 aa14.1□□□□□ -0.15
PTPRE-203ENST00000442830 ADCY5O95622 1261 aa14.1□□□□□ -0.15
PTPRE-203ENST00000442830 CTSLP07711 333 aa14.1□□□□□ -0.15
PTPRE-203ENST00000442830 CKMT1AP12532 417 aa14.1□□□□□ -0.15
PTPRE-203ENST00000442830 ITGB7P26010 798 aa14.1□□□□□ -0.15
PTPRE-203ENST00000442830 RABIFP47224 123 aa14.1□□□□□ -0.15
PTPRE-203ENST00000442830 SERPINH1P50454 418 aaKnown RBP14.1□□□□□ -0.15
PTPRE-203ENST00000442830 UCNP55089 124 aa14.1□□□□□ -0.15
PTPRE-203ENST00000442830 INSM1Q01101 510 aaPredicted RBP14.1□□□□□ -0.15
PTPRE-203ENST00000442830 ARL13BQ3SXY8 428 aa14.1□□□□□ -0.15
PTPRE-203ENST00000442830 POM121L1PQ3SYA9 428 aa14.1□□□□□ -0.15
PTPRE-203ENST00000442830 KYAT3Q6YP21 454 aaKnown RBP14.1□□□□□ -0.15
PTPRE-203ENST00000442830 C14orf80Q86SX3 495 aa14.1□□□□□ -0.15
PTPRE-203ENST00000442830 ZNF683Q8IZ20 524 aa14.1□□□□□ -0.15
PTPRE-203ENST00000442830 ISG20Q96AZ6 181 aaKnown RBP14.1□□□□□ -0.15
PTPRE-203ENST00000442830 CALN1Q9BXU9 219 aa14.1□□□□□ -0.15
PTPRE-203ENST00000442830 ZYG11BQ9C0D3 744 aa14.1□□□□□ -0.15
PTPRE-203ENST00000442830 NDST4Q9H3R1 872 aa14.1□□□□□ -0.15
PTPRE-203ENST00000442830 SIX2Q9NPC8 291 aa14.1□□□□□ -0.15
PTPRE-203ENST00000442830 BPTFQ12830 3046 aa14.1□□□□□ -0.15
PTPRE-203ENST00000442830 TEX51A0A1B0GUA7 166 aa14.09□□□□□ -0.15
PTPRE-203ENST00000442830 SNAP91O60641 907 aa14.09□□□□□ -0.15
PTPRE-203ENST00000442830 SDC3O75056 442 aa14.09□□□□□ -0.15
PTPRE-203ENST00000442830 PIAS2O75928 621 aa14.09□□□□□ -0.15
PTPRE-203ENST00000442830 MT-CO1P00395 513 aa14.09□□□□□ -0.15
PTPRE-203ENST00000442830 MT-CO3P00414 261 aa14.09□□□□□ -0.15
PTPRE-203ENST00000442830 RRM1P23921 792 aa14.09□□□□□ -0.15
PTPRE-203ENST00000442830 L1CAMP32004 1257 aa14.09□□□□□ -0.15
PTPRE-203ENST00000442830 IRAK1P51617 712 aa14.09□□□□□ -0.15
PTPRE-203ENST00000442830 RNASE9P60153 205 aaKnown RBP14.09□□□□□ -0.15
PTPRE-203ENST00000442830 C19orf57Q0VDD7 668 aa14.09□□□□□ -0.15
PTPRE-203ENST00000442830 RAPGEF1Q13905 1077 aa14.09□□□□□ -0.15
PTPRE-203ENST00000442830 TBC1D25Q3MII6 688 aa14.09□□□□□ -0.15
PTPRE-203ENST00000442830 TMEM259Q4ZIN3 620 aa14.09□□□□□ -0.15
PTPRE-203ENST00000442830 ALFQ53S48 1182 aa14.09□□□□□ -0.15
PTPRE-203ENST00000442830 CT47A1Q5JQC4 288 aaPredicted RBP14.09□□□□□ -0.15
PTPRE-203ENST00000442830 OTUD1Q5VV17 481 aaPredicted RBP14.09□□□□□ -0.15
PTPRE-203ENST00000442830 ZNF677Q86XU0 584 aa14.09□□□□□ -0.15
PTPRE-203ENST00000442830 XYLT1Q86Y38 959 aa14.09□□□□□ -0.15
PTPRE-203ENST00000442830 DENND6BQ8NEG7 585 aa14.09□□□□□ -0.15
PTPRE-203ENST00000442830 ASB12Q8WXK4 309 aa14.09□□□□□ -0.15
PTPRE-203ENST00000442830 ZNF578Q96N58 590 aaPredicted RBP14.09□□□□□ -0.15
PTPRE-203ENST00000442830 TBCBQ99426 244 aa14.09□□□□□ -0.15
PTPRE-203ENST00000442830 HEPHQ9BQS7 1158 aa14.09□□□□□ -0.15
PTPRE-203ENST00000442830 PRORYQ9H606 182 aa14.09□□□□□ -0.15
PTPRE-203ENST00000442830 ATP13A1Q9HD20 1204 aa14.09□□□□□ -0.15
PTPRE-203ENST00000442830 HPCAL4Q9UM19 191 aa14.09□□□□□ -0.15
PTPRE-203ENST00000442830 DAAM1Q9Y4D1 1078 aa14.09□□□□□ -0.15
PTPRE-203ENST00000442830 CSNK1G3Q9Y6M4 447 aa14.09□□□□□ -0.15
PTPRE-203ENST00000442830 TRIM38O00635 465 aa14.08□□□□□ -0.16
PTPRE-203ENST00000442830 TOR1BO14657 336 aa14.08□□□□□ -0.16
PTPRE-203ENST00000442830 SCAMP1O15126 338 aa14.08□□□□□ -0.16
PTPRE-203ENST00000442830 ATXN7O15265 892 aaPredicted RBP14.08□□□□□ -0.16
PTPRE-203ENST00000442830 TSPAN6O43657 245 aa14.08□□□□□ -0.16
PTPRE-203ENST00000442830 LZTS3O60299 673 aaPredicted RBP14.08□□□□□ -0.16
PTPRE-203ENST00000442830 BRINP1O60477 761 aa14.08□□□□□ -0.16
PTPRE-203ENST00000442830 GADD45BO75293 160 aaPredicted RBP14.08□□□□□ -0.16
PTPRE-203ENST00000442830 LEFTY1O75610 366 aa14.08□□□□□ -0.16
PTPRE-203ENST00000442830 ADRB3P13945 408 aa14.08□□□□□ -0.16
PTPRE-203ENST00000442830 CYP11B1P15538 503 aa14.08□□□□□ -0.16
PTPRE-203ENST00000442830 PRLRP16471 622 aa14.08□□□□□ -0.16
PTPRE-203ENST00000442830 ERCC5P28715 1186 aaPredicted RBP14.08□□□□□ -0.16
PTPRE-203ENST00000442830 GGCXP38435 758 aa14.08□□□□□ -0.16
PTPRE-203ENST00000442830 MAPKAPK2P49137 400 aa14.08□□□□□ -0.16
PTPRE-203ENST00000442830 NUMBP49757 651 aa14.08□□□□□ -0.16
PTPRE-203ENST00000442830 PCBP4P57723 403 aaKnown RBP14.08□□□□□ -0.16
PTPRE-203ENST00000442830 NRG1Q02297 640 aaPredicted RBP14.08□□□□□ -0.16
PTPRE-203ENST00000442830 SGCGQ13326 291 aa14.08□□□□□ -0.16
PTPRE-203ENST00000442830 DRAP1Q14919 205 aaPredicted RBP14.08□□□□□ -0.16
PTPRE-203ENST00000442830 POLD3Q15054 466 aaPredicted RBP14.08□□□□□ -0.16
PTPRE-203ENST00000442830 VWA3BQ502W6 1294 aa14.08□□□□□ -0.16
PTPRE-203ENST00000442830 CARD16Q5EG05 197 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms