RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 ADSLP30566 484 aaPredicted RBP8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 TUBP50607 506 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 RPL10AP62906 217 aaKnown RBP8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 RING1Q06587 406 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 ASPHQ12797 758 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 C5orf22Q49AR2 442 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 KDELC1Q6UW63 502 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 ZYG11AQ6WRX3 759 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 CEP57Q86XR8 500 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 C10orf107Q8IVU9 208 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 PPHLN1Q8NEY8 458 aaKnown RBP8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 PXYLP1Q8TE99 480 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 PDCD6IPQ8WUM4 868 aaKnown RBP8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 MFSD3Q96ES6 412 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 VPS39Q96JC1 886 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 FAM167BQ9BTA0 163 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 ARHGAP39Q9C0H5 1083 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 DENND2DQ9H6A0 471 aaPredicted RBP8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 NMRAL1Q9HBL8 299 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 C20orf96Q9NUD7 363 aaPredicted RBP8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 OXSMQ9NWU1 459 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 TMEM161AQ9NX61 479 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 PLA2G4CQ9UP65 541 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 NOD1Q9Y239 953 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 DNAJC16Q9Y2G8 782 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 SNX10Q9Y5X0 201 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 HS3ST4Q9Y661 456 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 DOCK4Q8N1I0 1966 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 A0A1W2PQH9 124 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 TARM1B6A8C7 271 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 TBC1D4O60343 1298 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 DDHD2O94830 711 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 ITGB1P05556 798 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 RENBPP51606 427 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 KPNA2P52292 529 aaKnown RBP8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 KPNA1P52294 538 aaPredicted RBP8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 HTRA3P83110 453 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 TRIM32Q13049 653 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 SLC12A1Q13621 1099 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 LAMB3Q13751 1172 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 TRIP4Q15650 581 aaPredicted RBP8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 TSNAXIP1Q2TAA8 658 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 HSP90AA5PQ58FG0 334 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 CLLU1OSQ5K130 101 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 FAM182AQ5T1J6 154 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 RWDD4Q6NW29 188 aaKnown RBP8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 C16orf46Q6P387 395 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 NET1Q7Z628 596 aaPredicted RBP8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 ALYREFQ86V81 257 aaKnown RBP8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 TREML1Q86YW5 311 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 KIRREL3Q8IZU9 778 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 MAB21L3Q8N8X9 362 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 ATP6V0D2Q8N8Y2 350 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 C2CD4AQ8NCU7 369 aaPredicted RBP8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 CALML6Q8TD86 181 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 SCG3Q8WXD2 468 aaKnown RBP8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 LINC01599Q8WXQ3 324 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 NMUR1Q9HB89 426 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 TRPC7Q9HCX4 862 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 CHRAC1Q9NRG0 131 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 MRGBPQ9NV56 204 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 SLC17A6Q9P2U8 582 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 SRRDQ9UH36 339 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 SHROOM3Q8TF72 1996 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 MYO16Q9Y6X6 1858 aa8.33□□□□□ -1.08
SPIRE1-204ENST00000440472 A0A087X1B8 175 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 ITM2AO43736 263 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 USP12O75317 370 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 TM7SF2O76062 418 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 ZDHHC11BP0C7U3 371 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 GM2AP17900 193 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 FGFR3P22607 806 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 NMBRP28336 390 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 SLC26A3P40879 764 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 MAPKAPK2P49137 400 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 YBEYP58557 167 aaPredicted RBP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 DNAJB13P59910 316 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 POU4F1Q01851 419 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 ELAVL2Q12926 359 aaKnown RBP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 TRMT5Q32P41 509 aaKnown RBP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 SLC39A12Q504Y0 691 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 PPM1JQ5JR12 505 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 SH2D4BQ5SQS7 431 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 EPGNQ6UW88 154 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 CES3Q6UWW8 571 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 RINLQ6ZS11 566 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 OTOP3Q7RTS5 596 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 CTU1Q7Z7A3 348 aaKnown RBP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 TTC7BQ86TV6 843 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 TMEM151AQ8N4L1 468 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 NETO2Q8NC67 525 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 SPPL2BQ8TCT7 592 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 STYXQ8WUJ0 223 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 IMP4Q96G21 291 aaKnown RBP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 CELF6Q96J87 481 aaKnown RBP8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 BTN2A3PQ96KV6 586 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 MRGPRX2Q96LB1 330 aa8.32□□□□□ -1.08
SPIRE1-204ENST00000440472 GLT1D1Q96MS3 346 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms