RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 HIBCHQ6NVY1 386 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 TRIM65Q6PJ69 517 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 TMEM108Q6UXF1 575 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 SYT10Q6XYQ8 523 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 TMTC1Q8IUR5 882 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 CREBRFQ8IUR6 639 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 TMEM139Q8IV31 216 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 CNGA4Q8IV77 575 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 LIX1LQ8IVB5 337 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 ADGRF4Q8IZF3 695 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 ADSSL1Q8N142 457 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 PDCL2Q8N4E4 241 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 LRRC71Q8N4P6 559 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 MYCT1Q8N699 235 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 TC2NQ8N9U0 490 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 FAM46DQ8NEK8 389 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 SLC35A4Q96G79 324 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 DHTKD1Q96HY7 919 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 MSLNLQ96KJ4 702 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 SLC46A1Q96NT5 459 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 PANX2Q96RD6 677 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 PLIN2Q99541 437 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 C1orf43Q9BWL3 253 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 COLEC11Q9BWP8 271 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 TTLL2Q9BWV7 592 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 C1QTNF7Q9BXJ2 289 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 IDI2Q9BXS1 227 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 RAB34Q9BZG1 259 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 UNKQ9C0B0 810 aaKnown RBP3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 GLT8D2Q9H1C3 349 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 GLOD4Q9HC38 313 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 RIC8AQ9NPQ8 531 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 ZSCAN32Q9NX65 697 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 NYAP2Q9P242 653 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 CGNQ9P2M7 1197 aaKnown RBP3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 PI4KBQ9UBF8 816 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 HESX1Q9UBX0 185 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 ADD3Q9UEY8 706 aaKnown RBP3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 LRWD1Q9UFC0 647 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 FBXO9Q9UK97 447 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 GDAQ9Y2T3 454 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 PPP2R2CQ9Y2T4 447 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 PCDHGB2Q9Y5G2 931 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 SNX13Q9Y5W8 968 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 CHD4Q14839 1912 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 LAMB1P07942 1786 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 CASZ1Q86V15 1759 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 ITIH6Q6UXX5 1313 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 PVALEFA0A1B0GWK0 134 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 A0A1W2PPC4 97 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 BICDL2A1A5D9 508 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 POM121BA6NF01 834 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 ISM1B1AKI9 464 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 PSMA7O14818 248 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 ZBTB5O15062 677 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 ECE2O60344 883 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 ENTPD3O75355 529 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 PRKCBP05771 671 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 GRPP07492 148 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 CCDC175P0C221 793 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 EEF2P13639 858 aaKnown RBP3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 CCNE1P24864 410 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 CASQ1P31415 396 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 CASP14P31944 242 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 CCT6AP40227 531 aaKnown RBP3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 WNT3P56703 355 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 GNG11P61952 73 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 TUBA4AP68366 448 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 ASIC1P78348 528 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 FMO1Q01740 532 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 UBXN1Q04323 297 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 NCBP1Q09161 790 aaKnown RBP3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 EIF2B5Q13144 721 aaKnown RBP3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 DAG1Q14118 895 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 TCP11X2Q5H9J9 407 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 KRT79Q5XKE5 535 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 DENND2CQ68D51 928 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 TATDN1Q6P1N9 297 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 CYP26C1Q6V0L0 522 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 MMS22LQ6ZRQ5 1243 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 UNC13DQ70J99 1090 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 RASGRP2Q7LDG7 609 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 SESTD1Q86VW0 696 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 FAM114A1Q8IWE2 563 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 ZNF397Q8NF99 534 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 BRI3BPQ8WY22 251 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 CCT6BQ92526 530 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 CUL5Q93034 780 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 P2RX5Q93086 422 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 TMEM41AQ96HV5 264 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 LRIG1Q96JA1 1093 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 MRGPRX1Q96LB2 322 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 MTMR9Q96QG7 549 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 MMTAG2Q9BU76 263 aaKnown RBP3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 NUP58Q9BVL2 599 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 CCDC94Q9BW85 323 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 TRIM9Q9C026 710 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 TTYH3Q9C0H2 523 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 MYLK2Q9H1R3 596 aa3.7□□□□□ -1.82
HMGB3P11-201ENST00000440127 VPS16Q9H269 839 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms