RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 A0A1W2PR77 199 aa19.2■□□□□ 0.66
CCDC78-204ENST00000439619 SIGLEC16A6NMB1 481 aa19.2■□□□□ 0.66
CCDC78-204ENST00000439619 SMTNL1A8MU46 457 aa19.2■□□□□ 0.66
CCDC78-204ENST00000439619 C10orf142B7Z368 130 aa19.2■□□□□ 0.66
CCDC78-204ENST00000439619 SMAD6O43541 496 aaKnown RBP19.2■□□□□ 0.66
CCDC78-204ENST00000439619 WNT1P04628 370 aa19.2■□□□□ 0.66
CCDC78-204ENST00000439619 PLEKP08567 350 aaPredicted RBP19.2■□□□□ 0.66
CCDC78-204ENST00000439619 RFC1P35251 1148 aaPredicted RBP19.2■□□□□ 0.66
CCDC78-204ENST00000439619 NXPH1P58417 271 aa19.2■□□□□ 0.66
CCDC78-204ENST00000439619 POLD3Q15054 466 aaPredicted RBP19.2■□□□□ 0.66
CCDC78-204ENST00000439619 ARSIQ5FYB1 569 aa19.2■□□□□ 0.66
CCDC78-204ENST00000439619 EFHC2Q5JST6 749 aa19.2■□□□□ 0.66
CCDC78-204ENST00000439619 ERN2Q76MJ5 926 aaKnown RBP19.2■□□□□ 0.66
CCDC78-204ENST00000439619 SLFN11Q7Z7L1 901 aa19.2■□□□□ 0.66
CCDC78-204ENST00000439619 SLCO6A1Q86UG4 719 aa19.2■□□□□ 0.66
CCDC78-204ENST00000439619 GALNT15Q8N3T1 639 aa19.2■□□□□ 0.66
CCDC78-204ENST00000439619 CENPIQ92674 756 aaPredicted RBP19.2■□□□□ 0.66
CCDC78-204ENST00000439619 NTAN1Q96AB6 310 aa19.2■□□□□ 0.66
CCDC78-204ENST00000439619 PCDHB18PQ96TA0 734 aa19.2■□□□□ 0.66
CCDC78-204ENST00000439619 HEPHQ9BQS7 1158 aa19.2■□□□□ 0.66
CCDC78-204ENST00000439619 TMEM121BQ9BXQ6 578 aaPredicted RBP19.2■□□□□ 0.66
CCDC78-204ENST00000439619 HDAC8Q9BY41 377 aa19.2■□□□□ 0.66
CCDC78-204ENST00000439619 MAGEH1Q9H213 219 aa19.2■□□□□ 0.66
CCDC78-204ENST00000439619 ARHGAP20Q9P2F6 1191 aa19.2■□□□□ 0.66
CCDC78-204ENST00000439619 BTBD3Q9Y2F9 522 aa19.2■□□□□ 0.66
CCDC78-204ENST00000439619 RAMP2O60895 175 aa19.19■□□□□ 0.66
CCDC78-204ENST00000439619 PCDH8O95206 1070 aa19.19■□□□□ 0.66
CCDC78-204ENST00000439619 CTSLP07711 333 aa19.19■□□□□ 0.66
CCDC78-204ENST00000439619 ATXN1LP0C7T5 689 aaKnown RBP19.19■□□□□ 0.66
CCDC78-204ENST00000439619 GLDCP23378 1020 aa19.19■□□□□ 0.66
CCDC78-204ENST00000439619 AKT2P31751 481 aa19.19■□□□□ 0.66
CCDC78-204ENST00000439619 CARD16Q5EG05 197 aa19.19■□□□□ 0.66
CCDC78-204ENST00000439619 PIP5KL1Q5T9C9 394 aa19.19■□□□□ 0.66
CCDC78-204ENST00000439619 DCUN1D2Q6PH85 259 aa19.19■□□□□ 0.66
CCDC78-204ENST00000439619 DPY19L3Q6ZPD9 716 aa19.19■□□□□ 0.66
CCDC78-204ENST00000439619 ZNF354CQ86Y25 554 aa19.19■□□□□ 0.66
CCDC78-204ENST00000439619 RYBPQ8N488 228 aaPredicted RBP19.19■□□□□ 0.66
CCDC78-204ENST00000439619 TMEM248Q9NWD8 314 aa19.19■□□□□ 0.66
CCDC78-204ENST00000439619 ZNF212Q9UDV6 495 aa19.19■□□□□ 0.66
CCDC78-204ENST00000439619 MYO6Q9UM54 1294 aa19.19■□□□□ 0.66
CCDC78-204ENST00000439619 KMT2BQ9UMN6 2715 aaPredicted RBP19.18■□□□□ 0.66
CCDC78-204ENST00000439619 A0A1W2PQU0 124 aa19.18■□□□□ 0.66
CCDC78-204ENST00000439619 LEFTY1O75610 366 aa19.18■□□□□ 0.66
CCDC78-204ENST00000439619 ZMPSTE24O75844 475 aa19.18■□□□□ 0.66
CCDC78-204ENST00000439619 LRIG2O94898 1065 aa19.18■□□□□ 0.66
CCDC78-204ENST00000439619 CDK4P11802 303 aa19.18■□□□□ 0.66
CCDC78-204ENST00000439619 NEK3P51956 506 aa19.18■□□□□ 0.66
CCDC78-204ENST00000439619 AIF1P55008 147 aa19.18■□□□□ 0.66
CCDC78-204ENST00000439619 HDAC4P56524 1084 aa19.18■□□□□ 0.66
CCDC78-204ENST00000439619 PTP4A2Q12974 167 aa19.18■□□□□ 0.66
CCDC78-204ENST00000439619 NCAPHQ15003 741 aa19.18■□□□□ 0.66
CCDC78-204ENST00000439619 ANO6Q4KMQ2 910 aa19.18■□□□□ 0.66
CCDC78-204ENST00000439619 PRAMEF14Q5SWL7 426 aa19.18■□□□□ 0.66
CCDC78-204ENST00000439619 SCYL2Q6P3W7 929 aa19.18■□□□□ 0.66
CCDC78-204ENST00000439619 FBXL19Q6PCT2 694 aa19.18■□□□□ 0.66
CCDC78-204ENST00000439619 WDR59Q6PJI9 974 aa19.18■□□□□ 0.66
CCDC78-204ENST00000439619 MON1BQ7L1V2 547 aa19.18■□□□□ 0.66
CCDC78-204ENST00000439619 HORMAD1Q86X24 394 aa19.18■□□□□ 0.66
CCDC78-204ENST00000439619 GATAD2AQ86YP4 633 aa19.18■□□□□ 0.66
CCDC78-204ENST00000439619 CHST14Q8NCH0 376 aa19.18■□□□□ 0.66
CCDC78-204ENST00000439619 FAM174AQ8TBP5 190 aa19.18■□□□□ 0.66
CCDC78-204ENST00000439619 ISG20Q96AZ6 181 aaKnown RBP19.18■□□□□ 0.66
CCDC78-204ENST00000439619 KLHDC7BQ96G42 594 aa19.18■□□□□ 0.66
CCDC78-204ENST00000439619 BPIFA3Q9BQP9 254 aa19.18■□□□□ 0.66
CCDC78-204ENST00000439619 DONSONQ9NYP3 566 aa19.18■□□□□ 0.66
CCDC78-204ENST00000439619 DNAI1Q9UI46 699 aa19.18■□□□□ 0.66
CCDC78-204ENST00000439619 ZSCAN5CA6NGD5 496 aaPredicted RBP19.17■□□□□ 0.66
CCDC78-204ENST00000439619 WNT9AO14904 365 aa19.17■□□□□ 0.66
CCDC78-204ENST00000439619 GJB6O95452 261 aa19.17■□□□□ 0.66
CCDC78-204ENST00000439619 LDOC1O95751 146 aaPredicted RBP19.17■□□□□ 0.66
CCDC78-204ENST00000439619 TNFAIP3P21580 790 aa19.17■□□□□ 0.66
CCDC78-204ENST00000439619 ITGB7P26010 798 aa19.17■□□□□ 0.66
CCDC78-204ENST00000439619 EPHA8P29322 1005 aaPredicted RBP19.17■□□□□ 0.66
CCDC78-204ENST00000439619 L1CAMP32004 1257 aa19.17■□□□□ 0.66
CCDC78-204ENST00000439619 RXRGP48443 463 aa19.17■□□□□ 0.66
CCDC78-204ENST00000439619 ZNF143P52747 638 aaPredicted RBP19.17■□□□□ 0.66
CCDC78-204ENST00000439619 TAS2R38P59533 333 aa19.17■□□□□ 0.66
CCDC78-204ENST00000439619 ARF5P84085 180 aa19.17■□□□□ 0.66
CCDC78-204ENST00000439619 SCAPQ12770 1279 aa19.17■□□□□ 0.66
CCDC78-204ENST00000439619 HS1BP3Q53T59 392 aa19.17■□□□□ 0.66
CCDC78-204ENST00000439619 CCDC157Q569K6 752 aa19.17■□□□□ 0.66
CCDC78-204ENST00000439619 MANEALQ5VSG8 457 aa19.17■□□□□ 0.66
CCDC78-204ENST00000439619 ACAD10Q6JQN1 1059 aa19.17■□□□□ 0.66
CCDC78-204ENST00000439619 CCNI2Q6ZMN8 369 aaPredicted RBP19.17■□□□□ 0.66
CCDC78-204ENST00000439619 ZSCAN30Q86W11 494 aa19.17■□□□□ 0.66
CCDC78-204ENST00000439619 PLPP6Q8IY26 295 aa19.17■□□□□ 0.66
CCDC78-204ENST00000439619 CCDC185Q8N715 623 aa19.17■□□□□ 0.66
CCDC78-204ENST00000439619 SAP25Q8TEE9 199 aa19.17■□□□□ 0.66
CCDC78-204ENST00000439619 ARRDC3Q96B67 414 aa19.17■□□□□ 0.66
CCDC78-204ENST00000439619 LRIG1Q96JA1 1093 aa19.17■□□□□ 0.66
CCDC78-204ENST00000439619 MCEEQ96PE7 176 aa19.17■□□□□ 0.66
CCDC78-204ENST00000439619 EPAS1Q99814 870 aa19.17■□□□□ 0.66
CCDC78-204ENST00000439619 CNPY3Q9BT09 278 aa19.17■□□□□ 0.66
CCDC78-204ENST00000439619 HECAQ9UBI9 543 aaPredicted RBP19.17■□□□□ 0.66
CCDC78-204ENST00000439619 SLC31A1O15431 190 aa19.16■□□□□ 0.66
CCDC78-204ENST00000439619 ATP1A3P13637 1013 aa19.16■□□□□ 0.66
CCDC78-204ENST00000439619 HNRNPA2B1P22626 353 aaKnown RBP19.16■□□□□ 0.66
CCDC78-204ENST00000439619 EPHB2P29323 1055 aa19.16■□□□□ 0.66
CCDC78-204ENST00000439619 CCNHP51946 323 aaPredicted RBP19.16■□□□□ 0.66
CCDC78-204ENST00000439619 SNRPD1P62314 119 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms