RNA–Protein interactions for RNA: ENST00000438067.5

PTCH2-202, Transcript of patched 2, humanhuman

TSL 3

Gene PTCH2, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-202ENST00000438067 ARHGEF38Q9NXL2 777 aa17.72■□□□□ 0.43
PTCH2-202ENST00000438067 NLGN3Q9NZ94 848 aa17.72■□□□□ 0.43
PTCH2-202ENST00000438067 APEX2Q9UBZ4 518 aa17.72■□□□□ 0.43
PTCH2-202ENST00000438067 SNX10Q9Y5X0 201 aa17.72■□□□□ 0.43
PTCH2-202ENST00000438067 MYLKQ15746 1914 aa17.72■□□□□ 0.43
PTCH2-202ENST00000438067 ATMQ13315 3056 aa17.71■□□□□ 0.43
PTCH2-202ENST00000438067 A0A0D9SEW6 157 aa17.71■□□□□ 0.43
PTCH2-202ENST00000438067 LY6G6EA0A0G2JKS1 128 aa17.71■□□□□ 0.43
PTCH2-202ENST00000438067 NEMP2A6NFY4 417 aa17.71■□□□□ 0.43
PTCH2-202ENST00000438067 DRGXA6NNA5 263 aa17.71■□□□□ 0.43
PTCH2-202ENST00000438067 SCAMP1O15126 338 aa17.71■□□□□ 0.43
PTCH2-202ENST00000438067 FGFR1OPO95684 399 aaKnown RBP17.71■□□□□ 0.43
PTCH2-202ENST00000438067 ALPPL2P10696 532 aa17.71■□□□□ 0.43
PTCH2-202ENST00000438067 TFE3P19532 575 aaPredicted RBP17.71■□□□□ 0.43
PTCH2-202ENST00000438067 CLCN6P51797 869 aa17.71■□□□□ 0.43
PTCH2-202ENST00000438067 SNX16P57768 344 aa17.71■□□□□ 0.43
PTCH2-202ENST00000438067 TMEM259Q4ZIN3 620 aa17.71■□□□□ 0.43
PTCH2-202ENST00000438067 ZNF542PQ5EBM4 170 aa17.71■□□□□ 0.43
PTCH2-202ENST00000438067 ZNF605Q86T29 641 aa17.71■□□□□ 0.43
PTCH2-202ENST00000438067 SETD3Q86TU7 594 aaPredicted RBP17.71■□□□□ 0.43
PTCH2-202ENST00000438067 LSMEM2Q8N112 164 aa17.71■□□□□ 0.43
PTCH2-202ENST00000438067 FAM181AQ8N9Y4 354 aa17.71■□□□□ 0.43
PTCH2-202ENST00000438067 DCAF4L2Q8NA75 395 aa17.71■□□□□ 0.43
PTCH2-202ENST00000438067 ZNF397Q8NF99 534 aaPredicted RBP17.71■□□□□ 0.43
PTCH2-202ENST00000438067 NAF1Q96HR8 494 aaKnown RBP17.71■□□□□ 0.43
PTCH2-202ENST00000438067 BMFQ96LC9 184 aa17.71■□□□□ 0.43
PTCH2-202ENST00000438067 DEPDC7Q96QD5 511 aa17.71■□□□□ 0.43
PTCH2-202ENST00000438067 OSBPL2Q9H1P3 480 aa17.71■□□□□ 0.43
PTCH2-202ENST00000438067 TNKS2Q9H2K2 1166 aa17.71■□□□□ 0.43
PTCH2-202ENST00000438067 IL36AQ9UHA7 158 aa17.71■□□□□ 0.43
PTCH2-202ENST00000438067 U3KQA8 63 aa17.71■□□□□ 0.43
PTCH2-202ENST00000438067 NYNRINQ9P2P1 1898 aaKnown RBP17.7■□□□□ 0.42
PTCH2-202ENST00000438067 K7ESM1 405 aa17.7■□□□□ 0.42
PTCH2-202ENST00000438067 USP12O75317 370 aa17.7■□□□□ 0.42
PTCH2-202ENST00000438067 DXOO77932 396 aaKnown RBP17.7■□□□□ 0.42
PTCH2-202ENST00000438067 ENDOD1O94919 500 aa17.7■□□□□ 0.42
PTCH2-202ENST00000438067 GP1BAP07359 652 aa17.7■□□□□ 0.42
PTCH2-202ENST00000438067 PLA2G2AP14555 144 aa17.7■□□□□ 0.42
PTCH2-202ENST00000438067 KRT9P35527 623 aa17.7■□□□□ 0.42
PTCH2-202ENST00000438067 LSSP48449 732 aa17.7■□□□□ 0.42
PTCH2-202ENST00000438067 PCBP4P57723 403 aaKnown RBP17.7■□□□□ 0.42
PTCH2-202ENST00000438067 GABREP78334 506 aa17.7■□□□□ 0.42
PTCH2-202ENST00000438067 PTK2Q05397 1052 aa17.7■□□□□ 0.42
PTCH2-202ENST00000438067 PTPN20Q4JDL3 420 aa17.7■□□□□ 0.42
PTCH2-202ENST00000438067 BRMS1LQ5PSV4 323 aa17.7■□□□□ 0.42
PTCH2-202ENST00000438067 GBP6Q6ZN66 633 aa17.7■□□□□ 0.42
PTCH2-202ENST00000438067 DPY19L3Q6ZPD9 716 aa17.7■□□□□ 0.42
PTCH2-202ENST00000438067 DCP2Q8IU60 420 aaKnown RBP17.7■□□□□ 0.42
PTCH2-202ENST00000438067 FAM174AQ8TBP5 190 aa17.7■□□□□ 0.42
PTCH2-202ENST00000438067 GRIN3AQ8TCU5 1115 aa17.7■□□□□ 0.42
PTCH2-202ENST00000438067 SLC17A9Q9BYT1 436 aa17.7■□□□□ 0.42
PTCH2-202ENST00000438067 ABCG4Q9H172 646 aa17.7■□□□□ 0.42
PTCH2-202ENST00000438067 SYNCQ9H7C4 482 aa17.7■□□□□ 0.42
PTCH2-202ENST00000438067 DNAJC28Q9NX36 388 aa17.7■□□□□ 0.42
PTCH2-202ENST00000438067 RRN3Q9NYV6 651 aa17.7■□□□□ 0.42
PTCH2-202ENST00000438067 MPP6Q9NZW5 540 aa17.7■□□□□ 0.42
PTCH2-202ENST00000438067 HS3ST3A1Q9Y663 406 aa17.7■□□□□ 0.42
PTCH2-202ENST00000438067 DOCK9Q9BZ29 2069 aa17.7■□□□□ 0.42
PTCH2-202ENST00000438067 POM121BA6NF01 834 aa17.69■□□□□ 0.42
PTCH2-202ENST00000438067 A6NNZ2 444 aa17.69■□□□□ 0.42
PTCH2-202ENST00000438067 CSO75390 466 aaKnown RBP17.69■□□□□ 0.42
PTCH2-202ENST00000438067 ZNF821O75541 412 aaPredicted RBP17.69■□□□□ 0.42
PTCH2-202ENST00000438067 LEFTY1O75610 366 aa17.69■□□□□ 0.42
PTCH2-202ENST00000438067 NEBLO76041 1014 aa17.69■□□□□ 0.42
PTCH2-202ENST00000438067 PAK4O96013 591 aaPredicted RBP17.69■□□□□ 0.42
PTCH2-202ENST00000438067 RECQLP46063 649 aaPredicted RBP17.69■□□□□ 0.42
PTCH2-202ENST00000438067 DUSP3P51452 185 aaPredicted RBP17.69■□□□□ 0.42
PTCH2-202ENST00000438067 RNASE9P60153 205 aaKnown RBP17.69■□□□□ 0.42
PTCH2-202ENST00000438067 HNRNPKP61978 463 aaKnown RBP eCLIP17.69■□□□□ 0.42
PTCH2-202ENST00000438067 CFHR1Q03591 330 aa17.69■□□□□ 0.42
PTCH2-202ENST00000438067 FGL2Q14314 439 aa17.69■□□□□ 0.42
PTCH2-202ENST00000438067 FZD2Q14332 565 aa17.69■□□□□ 0.42
PTCH2-202ENST00000438067 EXOC3L4Q17RC7 722 aa17.69■□□□□ 0.42
PTCH2-202ENST00000438067 C22orf39Q6P5X5 142 aa17.69■□□□□ 0.42
PTCH2-202ENST00000438067 LRRC31Q6UY01 552 aa17.69■□□□□ 0.42
PTCH2-202ENST00000438067 TFAP2DQ7Z6R9 452 aa17.69■□□□□ 0.42
PTCH2-202ENST00000438067 CREBRFQ8IUR6 639 aa17.69■□□□□ 0.42
PTCH2-202ENST00000438067 NT5C3BQ969T7 300 aa17.69■□□□□ 0.42
PTCH2-202ENST00000438067 PPP1R16AQ96I34 528 aa17.69■□□□□ 0.42
PTCH2-202ENST00000438067 C1orf74Q96LT6 269 aa17.69■□□□□ 0.42
PTCH2-202ENST00000438067 DUSP23Q9BVJ7 150 aa17.69■□□□□ 0.42
PTCH2-202ENST00000438067 POLR1BQ9H9Y6 1135 aa17.69■□□□□ 0.42
PTCH2-202ENST00000438067 USP29Q9HBJ7 922 aa17.69■□□□□ 0.42
PTCH2-202ENST00000438067 GPR27Q9NS67 375 aa17.69■□□□□ 0.42
PTCH2-202ENST00000438067 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.69■□□□□ 0.42
PTCH2-202ENST00000438067 WASF2Q9Y6W5 498 aa17.69■□□□□ 0.42
PTCH2-202ENST00000438067 TENM4Q6N022 2769 aa17.68■□□□□ 0.42
PTCH2-202ENST00000438067 IGLV3-10A0A075B6K4 115 aa17.68■□□□□ 0.42
PTCH2-202ENST00000438067 ERVH48-1M5A8F1 160 aa17.68■□□□□ 0.42
PTCH2-202ENST00000438067 F9P00740 461 aa17.68■□□□□ 0.42
PTCH2-202ENST00000438067 PON1P27169 355 aa17.68■□□□□ 0.42
PTCH2-202ENST00000438067 OR1E1P30953 314 aa17.68■□□□□ 0.42
PTCH2-202ENST00000438067 CLCN1P35523 988 aa17.68■□□□□ 0.42
PTCH2-202ENST00000438067 NEK3P51956 506 aa17.68■□□□□ 0.42
PTCH2-202ENST00000438067 ERVPABLB-1P60509 514 aa17.68■□□□□ 0.42
PTCH2-202ENST00000438067 RPS21P63220 83 aaKnown RBP17.68■□□□□ 0.42
PTCH2-202ENST00000438067 MAPK8IP2Q13387 824 aaPredicted RBP17.68■□□□□ 0.42
PTCH2-202ENST00000438067 ARTNQ5T4W7 220 aa17.68■□□□□ 0.42
PTCH2-202ENST00000438067 BROXQ5VW32 411 aa17.68■□□□□ 0.42
PTCH2-202ENST00000438067 SMYD5Q6GMV2 418 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms