RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 GRAP2O75791 330 aa15.16■□□□□ 0.02
HDAC8-213ENST00000436675 ZNF202O95125 648 aa15.16■□□□□ 0.02
HDAC8-213ENST00000436675 PAK4O96013 591 aaPredicted RBP15.16■□□□□ 0.02
HDAC8-213ENST00000436675 RPL34P49207 117 aaKnown RBP15.16■□□□□ 0.02
HDAC8-213ENST00000436675 SKOR1P84550 965 aa15.16■□□□□ 0.02
HDAC8-213ENST00000436675 CDK17Q00537 523 aa15.16■□□□□ 0.02
HDAC8-213ENST00000436675 FGL2Q14314 439 aa15.16■□□□□ 0.02
HDAC8-213ENST00000436675 IGF2-ASQ6U949 168 aa15.16■□□□□ 0.02
HDAC8-213ENST00000436675 LINGO4Q6UY18 593 aa15.16■□□□□ 0.02
HDAC8-213ENST00000436675 ERN2Q76MJ5 926 aaKnown RBP15.16■□□□□ 0.02
HDAC8-213ENST00000436675 BEND5Q7L4P6 421 aa15.16■□□□□ 0.02
HDAC8-213ENST00000436675 DEFB106AQ8N104 65 aa15.16■□□□□ 0.02
HDAC8-213ENST00000436675 OR2A12Q8NGT7 310 aa15.16■□□□□ 0.02
HDAC8-213ENST00000436675 CCDC97Q96F63 343 aaPredicted RBP15.16■□□□□ 0.02
HDAC8-213ENST00000436675 IFT43Q96FT9 208 aa15.16■□□□□ 0.02
HDAC8-213ENST00000436675 TRIM62Q9BVG3 475 aa15.16■□□□□ 0.02
HDAC8-213ENST00000436675 SLC4A5Q9BY07 1137 aa15.16■□□□□ 0.02
HDAC8-213ENST00000436675 SLC17A9Q9BYT1 436 aa15.16■□□□□ 0.02
HDAC8-213ENST00000436675 SIK2Q9H0K1 926 aa15.16■□□□□ 0.02
HDAC8-213ENST00000436675 CDRT15L2A8MXV6 281 aa15.15■□□□□ 0.02
HDAC8-213ENST00000436675 AQP9O43315 295 aa15.15■□□□□ 0.02
HDAC8-213ENST00000436675 CNTN5O94779 1100 aa15.15■□□□□ 0.02
HDAC8-213ENST00000436675 LETM1O95202 739 aaPredicted RBP15.15■□□□□ 0.02
HDAC8-213ENST00000436675 CSF2P04141 144 aa15.15■□□□□ 0.02
HDAC8-213ENST00000436675 JUNDP17535 347 aa15.15■□□□□ 0.02
HDAC8-213ENST00000436675 CCR1P32246 355 aa15.15■□□□□ 0.02
HDAC8-213ENST00000436675 CSRP3P50461 194 aa15.15■□□□□ 0.02
HDAC8-213ENST00000436675 CCDC15Q0P6D6 951 aa15.15■□□□□ 0.02
HDAC8-213ENST00000436675 NME3Q13232 169 aa15.15■□□□□ 0.02
HDAC8-213ENST00000436675 EIF4EBP2Q13542 120 aaPredicted RBP15.15■□□□□ 0.02
HDAC8-213ENST00000436675 NR0B2Q15466 257 aa15.15■□□□□ 0.02
HDAC8-213ENST00000436675 TMEM259Q4ZIN3 620 aa15.15■□□□□ 0.02
HDAC8-213ENST00000436675 TPRG1LQ5T0D9 272 aa15.15■□□□□ 0.02
HDAC8-213ENST00000436675 ARL14Q8N4G2 192 aa15.15■□□□□ 0.02
HDAC8-213ENST00000436675 TMIEQ8NEW7 156 aa15.15■□□□□ 0.02
HDAC8-213ENST00000436675 CCDC114Q96M63 670 aa15.15■□□□□ 0.02
HDAC8-213ENST00000436675 KREMEN1Q96MU8 473 aa15.15■□□□□ 0.02
HDAC8-213ENST00000436675 MED15Q96RN5 788 aa15.15■□□□□ 0.02
HDAC8-213ENST00000436675 PSMB7Q99436 277 aa15.15■□□□□ 0.02
HDAC8-213ENST00000436675 THAP9Q9H5L6 903 aa15.15■□□□□ 0.02
HDAC8-213ENST00000436675 METTL14Q9HCE5 456 aaKnown RBP15.15■□□□□ 0.02
HDAC8-213ENST00000436675 ACP6Q9NPH0 428 aa15.15■□□□□ 0.02
HDAC8-213ENST00000436675 IL17BQ9UHF5 180 aa15.15■□□□□ 0.02
HDAC8-213ENST00000436675 VPS51Q9UID3 782 aa15.15■□□□□ 0.02
HDAC8-213ENST00000436675 PCDHGA8Q9Y5G5 932 aa15.15■□□□□ 0.02
HDAC8-213ENST00000436675 SNX10Q9Y5X0 201 aa15.15■□□□□ 0.02
HDAC8-213ENST00000436675 HS3ST4Q9Y661 456 aa15.15■□□□□ 0.02
HDAC8-213ENST00000436675 HS3ST3A1Q9Y663 406 aa15.15■□□□□ 0.02
HDAC8-213ENST00000436675 H3BM21 787 aa15.14■□□□□ 0.01
HDAC8-213ENST00000436675 EFSO43281 561 aa15.14■□□□□ 0.01
HDAC8-213ENST00000436675 THAP12O43422 761 aa15.14■□□□□ 0.01
HDAC8-213ENST00000436675 LEFTY1O75610 366 aa15.14■□□□□ 0.01
HDAC8-213ENST00000436675 PRNPP04156 253 aa15.14■□□□□ 0.01
HDAC8-213ENST00000436675 RHOCP08134 193 aa15.14■□□□□ 0.01
HDAC8-213ENST00000436675 SLC2A3P11169 496 aa15.14■□□□□ 0.01
HDAC8-213ENST00000436675 NME1P15531 152 aaKnown RBP15.14■□□□□ 0.01
HDAC8-213ENST00000436675 KRT83P78385 493 aa15.14■□□□□ 0.01
HDAC8-213ENST00000436675 SRSF6Q13247 344 aaKnown RBP15.14■□□□□ 0.01
HDAC8-213ENST00000436675 C1orf61Q13536 156 aa15.14■□□□□ 0.01
HDAC8-213ENST00000436675 PDE1CQ14123 709 aaPredicted RBP15.14■□□□□ 0.01
HDAC8-213ENST00000436675 ARL13BQ3SXY8 428 aa15.14■□□□□ 0.01
HDAC8-213ENST00000436675 CCDC40Q4G0X9 1142 aa15.14■□□□□ 0.01
HDAC8-213ENST00000436675 PARGQ86W56 976 aa15.14■□□□□ 0.01
HDAC8-213ENST00000436675 DCP2Q8IU60 420 aaKnown RBP15.14■□□□□ 0.01
HDAC8-213ENST00000436675 RBFAQ8N0V3 343 aa15.14■□□□□ 0.01
HDAC8-213ENST00000436675 WDR36Q8NI36 951 aaKnown RBP15.14■□□□□ 0.01
HDAC8-213ENST00000436675 LMO3Q8TAP4 145 aa15.14■□□□□ 0.01
HDAC8-213ENST00000436675 CCNL2Q96S94 520 aaPredicted RBP15.14■□□□□ 0.01
HDAC8-213ENST00000436675 IL12RB2Q99665 862 aa15.14■□□□□ 0.01
HDAC8-213ENST00000436675 TCEAL2Q9H3H9 227 aaPredicted RBP15.14■□□□□ 0.01
HDAC8-213ENST00000436675 IL36AQ9UHA7 158 aa15.14■□□□□ 0.01
HDAC8-213ENST00000436675 HS3ST2Q9Y278 367 aa15.14■□□□□ 0.01
HDAC8-213ENST00000436675 SPTY2D1-AS1A0A0U1RR47 76 aa15.13■□□□□ 0.01
HDAC8-213ENST00000436675 EME2A4GXA9 379 aaPredicted RBP15.13■□□□□ 0.01
HDAC8-213ENST00000436675 AGRPO00253 132 aa15.13■□□□□ 0.01
HDAC8-213ENST00000436675 SPINT1O43278 529 aa15.13■□□□□ 0.01
HDAC8-213ENST00000436675 LZTS3O60299 673 aaPredicted RBP15.13■□□□□ 0.01
HDAC8-213ENST00000436675 PAGE1O75459 146 aa15.13■□□□□ 0.01
HDAC8-213ENST00000436675 CLDN11O75508 207 aa15.13■□□□□ 0.01
HDAC8-213ENST00000436675 DNA2P51530 1060 aa15.13■□□□□ 0.01
HDAC8-213ENST00000436675 KRT85P78386 507 aa15.13■□□□□ 0.01
HDAC8-213ENST00000436675 LINC00303Q3SY05 128 aa15.13■□□□□ 0.01
HDAC8-213ENST00000436675 ALFQ53S48 1182 aa15.13■□□□□ 0.01
HDAC8-213ENST00000436675 ZNF658Q5TYW1 1059 aaPredicted RBP15.13■□□□□ 0.01
HDAC8-213ENST00000436675 C22orf39Q6P5X5 142 aa15.13■□□□□ 0.01
HDAC8-213ENST00000436675 KYAT3Q6YP21 454 aaKnown RBP15.13■□□□□ 0.01
HDAC8-213ENST00000436675 DPY19L3Q6ZPD9 716 aa15.13■□□□□ 0.01
HDAC8-213ENST00000436675 TMEM110Q86TL2 294 aa15.13■□□□□ 0.01
HDAC8-213ENST00000436675 JAMLQ86YT9 394 aa15.13■□□□□ 0.01
HDAC8-213ENST00000436675 HSCBQ8IWL3 235 aa15.13■□□□□ 0.01
HDAC8-213ENST00000436675 TPCN2Q8NHX9 752 aa15.13■□□□□ 0.01
HDAC8-213ENST00000436675 EXTL1Q92935 676 aa15.13■□□□□ 0.01
HDAC8-213ENST00000436675 ARHGAP9Q9BRR9 750 aa15.13■□□□□ 0.01
HDAC8-213ENST00000436675 HDAC8Q9BY41 377 aa15.13■□□□□ 0.01
HDAC8-213ENST00000436675 GTPBP4Q9BZE4 634 aaKnown RBP15.13■□□□□ 0.01
HDAC8-213ENST00000436675 GPR27Q9NS67 375 aa15.13■□□□□ 0.01
HDAC8-213ENST00000436675 RMND1Q9NWS8 449 aa15.13■□□□□ 0.01
HDAC8-213ENST00000436675 SALL4Q9UJQ4 1053 aa15.13■□□□□ 0.01
HDAC8-213ENST00000436675 TBC1D30Q9Y2I9 924 aa15.13■□□□□ 0.01
HDAC8-213ENST00000436675 CSNK1G3Q9Y6M4 447 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms