RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 NAB1Q13506 487 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 PGS1Q32NB8 556 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 EPC2Q52LR7 807 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 PRR16Q569H4 304 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 RABGAP1LQ5R372 815 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 VWA5B1Q5TIE3 1220 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 RTL10Q7L3V2 364 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 TSPYL5Q86VY4 417 aaPredicted RBP7.44□□□□□ -1.22
GARNL3-205ENST00000435213 ZNF354CQ86Y25 554 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 ARHGEF19Q8IW93 802 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 SCUBE3Q8IX30 993 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 ULK2Q8IYT8 1036 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 ZCCHC9Q8N567 271 aaKnown RBP7.44□□□□□ -1.22
GARNL3-205ENST00000435213 OR7D4Q8NG98 312 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 HM13Q8TCT9 377 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 SLC26A7Q8TE54 656 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 EPS8L1Q8TE68 723 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 POMGNT1Q8WZA1 660 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 AKAP1Q92667 903 aaKnown RBP eCLIP7.44□□□□□ -1.22
GARNL3-205ENST00000435213 LENG9Q96B70 501 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 TMIGD2Q96BF3 282 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 CDCA5Q96FF9 252 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 PCDHB18PQ96TA0 734 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 CHST7Q9NS84 486 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 DNAJC17Q9NVM6 304 aaKnown RBP7.44□□□□□ -1.22
GARNL3-205ENST00000435213 TMEM9Q9P0T7 183 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 ZNF219Q9P2Y4 722 aaPredicted RBP7.44□□□□□ -1.22
GARNL3-205ENST00000435213 MYRFQ9Y2G1 1151 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 CBY1Q9Y3M2 126 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 EXOC1LA0A1B0GW35 172 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 A0A1W2PRG6 482 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 USP17L15C9J2P7 530 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 USP17L13C9JLJ4 530 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 USP17L11C9JVI0 530 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 USP17L18D6R9N7 530 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 USP17L22D6RA61 530 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 USP17L17D6RBQ6 530 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 USP17L19D6RCP7 530 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 USP17L20D6RJB6 530 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 ATP2A1O14983 1001 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 PMM2O15305 246 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 USP12O75317 370 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 SLITRK5O94991 958 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 CRTAMO95727 393 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 APOC1P02654 83 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 AKR1B1P15121 316 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 PSMC3P17980 439 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 GABREP78334 506 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 ACY1Q03154 408 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 USP17L24Q0WX57 530 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 EFHC1Q5JVL4 640 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 IZUMO3Q5VZ72 239 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 OR7E24Q6IFN5 339 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 GALNT18Q6P9A2 607 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 USP17L6PQ6QN14 398 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 DPP8Q6V1X1 898 aaPredicted RBP7.44□□□□□ -1.22
GARNL3-205ENST00000435213 C1orf186Q6ZWK4 172 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 NKAIN4Q8IVV8 208 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 CADM2Q8N3J6 435 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 BEND7Q8N7W2 519 aaPredicted RBP7.44□□□□□ -1.22
GARNL3-205ENST00000435213 LEMD2Q8NC56 503 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 TMEM174Q8WUU8 243 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 DCUN1D1Q96GG9 259 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 ART5Q96L15 291 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 EIF2AK1Q9BQI3 630 aaKnown RBP7.44□□□□□ -1.22
GARNL3-205ENST00000435213 EFHD1Q9BUP0 239 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 TEX13BQ9BXU2 312 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 STARD7Q9NQZ5 370 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 EHD3Q9NZN3 535 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 KCND2Q9NZV8 630 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 EBF1Q9UH73 591 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 TNS1Q9HBL0 1735 aaKnown RBP7.44□□□□□ -1.22
GARNL3-205ENST00000435213 A0A087WXM4 84 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 ERVH48-1M5A8F1 160 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 ZBTB39O15060 712 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 TSC22D2O75157 780 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 CCNKO75909 580 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 KRT37O76014 449 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 SNAPINO95295 136 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 BCL10O95999 233 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 P4HBP07237 508 aaKnown RBP7.44□□□□□ -1.22
GARNL3-205ENST00000435213 F8A1P23610 371 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 SREBF1P36956 1147 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 MAGEA4P43358 317 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 ALDH1A3P47895 512 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 SERPINH1P50454 418 aaKnown RBP7.44□□□□□ -1.22
GARNL3-205ENST00000435213 PTP4A2Q12974 167 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 RTP2Q5QGT7 225 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 RBM20Q5T481 1227 aaKnown RBP7.44□□□□□ -1.22
GARNL3-205ENST00000435213 ARHGEF16Q5VV41 709 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 PLEKHG7Q6ZR37 379 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 OTOAQ7RTW8 1153 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 ZNF720Q7Z2F6 126 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 FBXO11Q86XK2 927 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 FAM71AQ8IYT1 594 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 CPA6Q8N4T0 437 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 OR6P1Q8NGX9 317 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 GANCQ8TET4 914 aa7.44□□□□□ -1.22
GARNL3-205ENST00000435213 GTF3C2Q8WUA4 911 aaPredicted RBP7.44□□□□□ -1.22
GARNL3-205ENST00000435213 S100ZQ8WXG8 99 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms