RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 CREB5Q02930 508 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 EN1Q05925 392 aaPredicted RBP11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 PRKAA1Q13131 559 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 CAPSQ13938 189 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 DHFR2Q86XF0 187 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 SNX29P2Q8IUI4 249 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 TMCO5AQ8N6Q1 288 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 TFAP2CQ92754 450 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 RBBP8Q99708 897 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 ADI1Q9BV57 179 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 ZFYVE28Q9HCC9 887 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 IARS2Q9NSE4 1012 aaKnown RBP11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 AP4E1Q9UPM8 1137 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 ST14Q9Y5Y6 855 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 TADA2AO75478 443 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 AP3M2P53677 418 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 ZNF460Q14592 562 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 KIZQ2M2Z5 673 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 ANKRD26P1Q6NSI1 321 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 RPS27LQ71UM5 84 aaKnown RBP11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 NAT16Q8N8M0 369 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 BPIFB6Q8NFQ5 453 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 KCTD4Q8WVF5 259 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 TAMM41Q96BW9 452 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 ZNF302Q9NR11 478 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 DTLQ9NZJ0 730 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 TSPAN16Q9UKR8 245 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 COL5A3P25940 1745 aaPredicted RBP11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 RNF103O00237 685 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 CXCL8P10145 99 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 GOT1P17174 413 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 GABRB3P28472 473 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 SLC7A1P30825 629 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 ACADVLP49748 655 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 IFRD2Q12894 506 aaPredicted RBP11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 BFSP2Q13515 415 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 USP10Q14694 798 aaKnown RBP11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 LIPMQ5VYY2 423 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 TMEM192Q8IY95 271 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 CNTD1Q8N815 330 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 HPS1Q92902 700 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 MPHOSPH6Q99547 160 aaKnown RBP11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 SLX1AQ9BQ83 275 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 DRC3Q9H069 523 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 FAM32AQ9Y421 112 aaKnown RBP11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 V9GYQ6 96 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 COL14A1Q05707 1796 aaKnown RBP11.71□□□□□ -0.53
HMGCS1-202ENST00000433297 ATP6AP2A0A1C7CYW4 349 aa11.71□□□□□ -0.53
HMGCS1-202ENST00000433297 ATP6AP2O75787 350 aa11.71□□□□□ -0.53
HMGCS1-202ENST00000433297 BCL10O95999 233 aa11.71□□□□□ -0.53
HMGCS1-202ENST00000433297 KCNA2P16389 499 aa11.71□□□□□ -0.53
HMGCS1-202ENST00000433297 SLC7A2P52569 658 aa11.71□□□□□ -0.53
HMGCS1-202ENST00000433297 MERTKQ12866 999 aa11.71□□□□□ -0.53
HMGCS1-202ENST00000433297 FASTKQ14296 549 aaKnown RBP11.71□□□□□ -0.53
HMGCS1-202ENST00000433297 MFSD4BQ5TF39 518 aa11.71□□□□□ -0.53
HMGCS1-202ENST00000433297 STEAP4Q687X5 459 aa11.71□□□□□ -0.53
HMGCS1-202ENST00000433297 VSIG10LQ86VR7 867 aa11.71□□□□□ -0.53
HMGCS1-202ENST00000433297 IFNEQ86WN2 208 aa11.71□□□□□ -0.53
HMGCS1-202ENST00000433297 SPPL2CQ8IUH8 684 aa11.71□□□□□ -0.53
HMGCS1-202ENST00000433297 RNF149Q8NC42 400 aa11.71□□□□□ -0.53
HMGCS1-202ENST00000433297 OR9I1Q8NGQ6 314 aa11.71□□□□□ -0.53
HMGCS1-202ENST00000433297 WNK4Q96J92 1243 aa11.71□□□□□ -0.53
HMGCS1-202ENST00000433297 RPL10LQ96L21 214 aaKnown RBP11.71□□□□□ -0.53
HMGCS1-202ENST00000433297 TCF12Q99081 682 aa11.71□□□□□ -0.53
HMGCS1-202ENST00000433297 CCDC68Q9H2F9 335 aa11.71□□□□□ -0.53
HMGCS1-202ENST00000433297 MORF4L1Q9UBU8 362 aa11.71□□□□□ -0.53
HMGCS1-202ENST00000433297 VPS51Q9UID3 782 aa11.71□□□□□ -0.53
HMGCS1-202ENST00000433297 SNX9Q9Y5X1 595 aa11.71□□□□□ -0.53
HMGCS1-202ENST00000433297 DGKBQ9Y6T7 804 aa11.71□□□□□ -0.53
HMGCS1-202ENST00000433297 A0A0A0MRY4 1105 aa11.71□□□□□ -0.54
HMGCS1-202ENST00000433297 OGTO15294 1046 aa11.71□□□□□ -0.54
HMGCS1-202ENST00000433297 TPD52L2O43399 206 aaKnown RBP11.71□□□□□ -0.54
HMGCS1-202ENST00000433297 ESRRBO95718 433 aa11.71□□□□□ -0.54
HMGCS1-202ENST00000433297 MT-ND1P03886 318 aa11.71□□□□□ -0.54
HMGCS1-202ENST00000433297 STX5Q13190 355 aa11.71□□□□□ -0.54
HMGCS1-202ENST00000433297 NIPAL1Q6NVV3 410 aa11.71□□□□□ -0.54
HMGCS1-202ENST00000433297 SLC2A7Q6PXP3 512 aa11.71□□□□□ -0.54
HMGCS1-202ENST00000433297 UTS2BQ765I0 119 aa11.71□□□□□ -0.54
HMGCS1-202ENST00000433297 RNF135Q8IUD6 432 aa11.71□□□□□ -0.54
HMGCS1-202ENST00000433297 LRRC71Q8N4P6 559 aa11.71□□□□□ -0.54
HMGCS1-202ENST00000433297 SPATA13Q96N96 652 aa11.71□□□□□ -0.54
HMGCS1-202ENST00000433297 MRPL4Q9BYD3 311 aaKnown RBP11.71□□□□□ -0.54
HMGCS1-202ENST00000433297 KLHL25Q9H0H3 589 aa11.71□□□□□ -0.54
HMGCS1-202ENST00000433297 MUC3BQ9H195 1237 aa11.71□□□□□ -0.54
HMGCS1-202ENST00000433297 UNC93B1Q9H1C4 597 aa11.71□□□□□ -0.54
HMGCS1-202ENST00000433297 PRDM16Q9HAZ2 1276 aa11.71□□□□□ -0.54
HMGCS1-202ENST00000433297 CYP4F12Q9HCS2 524 aa11.71□□□□□ -0.54
HMGCS1-202ENST00000433297 SPAG4Q9NPE6 437 aa11.71□□□□□ -0.54
HMGCS1-202ENST00000433297 RNF146Q9NTX7 359 aa11.71□□□□□ -0.54
HMGCS1-202ENST00000433297 C9JVG2 144 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 INO80B-WBP1J3KQ70 363 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 MRASO14807 208 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 WDR46O15213 610 aaKnown RBP11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 B4GAT1O43505 415 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 CCNA2P20248 432 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 GRM5P41594 1212 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 IREB2P48200 963 aaKnown RBP11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 NUMBP49757 651 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 LIMK2P53671 638 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 MOGQ16653 247 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms