RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 TMC6Q7Z403 805 aa15.22■□□□□ 0.03
PRKDC-203ENST00000432581 SPACA3Q8IXA5 215 aa15.22■□□□□ 0.03
PRKDC-203ENST00000432581 LSMEM2Q8N112 164 aa15.22■□□□□ 0.03
PRKDC-203ENST00000432581 FAM181AQ8N9Y4 354 aa15.22■□□□□ 0.03
PRKDC-203ENST00000432581 ZNF248Q8NDW4 579 aa15.22■□□□□ 0.03
PRKDC-203ENST00000432581 PGAP3Q96FM1 320 aaPredicted RBP15.22■□□□□ 0.03
PRKDC-203ENST00000432581 C1orf74Q96LT6 269 aa15.22■□□□□ 0.03
PRKDC-203ENST00000432581 ZNF578Q96N58 590 aaPredicted RBP15.22■□□□□ 0.03
PRKDC-203ENST00000432581 DEPDC7Q96QD5 511 aa15.22■□□□□ 0.03
PRKDC-203ENST00000432581 NPY6RQ99463 290 aa15.22■□□□□ 0.03
PRKDC-203ENST00000432581 LGMNQ99538 433 aa15.22■□□□□ 0.03
PRKDC-203ENST00000432581 FZD3Q9NPG1 666 aa15.22■□□□□ 0.03
PRKDC-203ENST00000432581 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.22■□□□□ 0.03
PRKDC-203ENST00000432581 IL36AQ9UHA7 158 aa15.22■□□□□ 0.03
PRKDC-203ENST00000432581 RWDD2AQ9UIY3 292 aa15.22■□□□□ 0.03
PRKDC-203ENST00000432581 ZFR2Q9UPR6 939 aaKnown RBP15.22■□□□□ 0.03
PRKDC-203ENST00000432581 HS3ST3A1Q9Y663 406 aa15.22■□□□□ 0.03
PRKDC-203ENST00000432581 KALRNO60229 2985 aa15.21■□□□□ 0.03
PRKDC-203ENST00000432581 RIOK3O14730 519 aaKnown RBP15.21■□□□□ 0.03
PRKDC-203ENST00000432581 SCAMP1O15126 338 aa15.21■□□□□ 0.03
PRKDC-203ENST00000432581 SMAD6O43541 496 aaKnown RBP15.21■□□□□ 0.03
PRKDC-203ENST00000432581 C1QL1O75973 258 aa15.21■□□□□ 0.03
PRKDC-203ENST00000432581 GIMD1P0DJR0 217 aa15.21■□□□□ 0.03
PRKDC-203ENST00000432581 PON1P27169 355 aa15.21■□□□□ 0.03
PRKDC-203ENST00000432581 SULT1E1P49888 294 aa15.21■□□□□ 0.03
PRKDC-203ENST00000432581 NEK3P51956 506 aa15.21■□□□□ 0.03
PRKDC-203ENST00000432581 PCBP4P57723 403 aaKnown RBP15.21■□□□□ 0.03
PRKDC-203ENST00000432581 HNRNPKP61978 463 aaKnown RBP eCLIP15.21■□□□□ 0.03
PRKDC-203ENST00000432581 RPS21P63220 83 aaKnown RBP15.21■□□□□ 0.03
PRKDC-203ENST00000432581 DEUP1Q05D60 604 aa15.21■□□□□ 0.03
PRKDC-203ENST00000432581 BECN1Q14457 450 aa15.21■□□□□ 0.03
PRKDC-203ENST00000432581 TMEM259Q4ZIN3 620 aa15.21■□□□□ 0.03
PRKDC-203ENST00000432581 ARSIQ5FYB1 569 aa15.21■□□□□ 0.03
PRKDC-203ENST00000432581 SEL1L3Q68CR1 1132 aa15.21■□□□□ 0.03
PRKDC-203ENST00000432581 KIAA1161Q6NSJ0 714 aa15.21■□□□□ 0.03
PRKDC-203ENST00000432581 ZNF783Q6ZMS7 281 aa15.21■□□□□ 0.03
PRKDC-203ENST00000432581 ZSCAN30Q86W11 494 aa15.21■□□□□ 0.03
PRKDC-203ENST00000432581 CREBRFQ8IUR6 639 aa15.21■□□□□ 0.03
PRKDC-203ENST00000432581 ZNF683Q8IZ20 524 aa15.21■□□□□ 0.03
PRKDC-203ENST00000432581 SLC22A18ASQ8N1D0 253 aa15.21■□□□□ 0.03
PRKDC-203ENST00000432581 CHST14Q8NCH0 376 aa15.21■□□□□ 0.03
PRKDC-203ENST00000432581 GRIN3AQ8TCU5 1115 aa15.21■□□□□ 0.03
PRKDC-203ENST00000432581 NT5C3BQ969T7 300 aa15.21■□□□□ 0.03
PRKDC-203ENST00000432581 APOLD1Q96LR9 279 aa15.21■□□□□ 0.03
PRKDC-203ENST00000432581 CEP44Q9C0F1 390 aa15.21■□□□□ 0.03
PRKDC-203ENST00000432581 PCDHB1Q9Y5F3 818 aa15.21■□□□□ 0.03
PRKDC-203ENST00000432581 IGLV3-10A0A075B6K4 115 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 A0A0D9SEW6 157 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 ILVBLA1L0T0 632 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 LEFTY1O75610 366 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 DXOO77932 396 aaKnown RBP15.2■□□□□ 0.02
PRKDC-203ENST00000432581 OR1E1P30953 314 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 SCNN1AP37088 669 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 UCNP55089 124 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 CLDN2P57739 230 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 BPIFB4P59827 614 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 RNASE9P60153 205 aaKnown RBP15.2■□□□□ 0.02
PRKDC-203ENST00000432581 CXADRP78310 365 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 APBA1Q02410 837 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 SLC20A2Q08357 652 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 SLC25A52Q3SY17 297 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 BROXQ5VW32 411 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 RETSATQ6NUM9 610 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 LINGO4Q6UY18 593 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 KYAT3Q6YP21 454 aaKnown RBP15.2■□□□□ 0.02
PRKDC-203ENST00000432581 DPY19L3Q6ZPD9 716 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 Q6ZSR6 202 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 PTAR1Q7Z6K3 402 aaPredicted RBP15.2■□□□□ 0.02
PRKDC-203ENST00000432581 TFAP2DQ7Z6R9 452 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 SLC47A2Q86VL8 602 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 PCDH20Q8N6Y1 951 aaKnown RBP15.2■□□□□ 0.02
PRKDC-203ENST00000432581 TMEM35BQ8NCS4 154 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 HIC2Q96JB3 615 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 FEM1CQ96JP0 617 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 ABCG4Q9H172 646 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 TNKS2Q9H2K2 1166 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 ANLNQ9NQW6 1124 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 GPR27Q9NS67 375 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 DNAJC28Q9NX36 388 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 NCKIPSDQ9NZQ3 722 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 MPP6Q9NZW5 540 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 WASF2Q9Y6W5 498 aa15.2■□□□□ 0.02
PRKDC-203ENST00000432581 CAPN8A6NHC0 703 aa15.19■□□□□ 0.02
PRKDC-203ENST00000432581 H3BM21 787 aa15.19■□□□□ 0.02
PRKDC-203ENST00000432581 I6L893 689 aaPredicted RBP15.19■□□□□ 0.02
PRKDC-203ENST00000432581 ADRB3P13945 408 aa15.19■□□□□ 0.02
PRKDC-203ENST00000432581 TFE3P19532 575 aaPredicted RBP15.19■□□□□ 0.02
PRKDC-203ENST00000432581 ITGB7P26010 798 aa15.19■□□□□ 0.02
PRKDC-203ENST00000432581 CLCN1P35523 988 aa15.19■□□□□ 0.02
PRKDC-203ENST00000432581 LSSP48449 732 aa15.19■□□□□ 0.02
PRKDC-203ENST00000432581 SERPINH1P50454 418 aaKnown RBP15.19■□□□□ 0.02
PRKDC-203ENST00000432581 ERVPABLB-1P60509 514 aa15.19■□□□□ 0.02
PRKDC-203ENST00000432581 GABREP78334 506 aa15.19■□□□□ 0.02
PRKDC-203ENST00000432581 HAPLN3Q96S86 360 aa15.19■□□□□ 0.02
PRKDC-203ENST00000432581 HEPHQ9BQS7 1158 aa15.19■□□□□ 0.02
PRKDC-203ENST00000432581 SLC17A9Q9BYT1 436 aa15.19■□□□□ 0.02
PRKDC-203ENST00000432581 PDCL3Q9H2J4 239 aa15.19■□□□□ 0.02
PRKDC-203ENST00000432581 POLR1BQ9H9Y6 1135 aa15.19■□□□□ 0.02
PRKDC-203ENST00000432581 DNAJC12Q9UKB3 198 aa15.19■□□□□ 0.02
PRKDC-203ENST00000432581 SNX10Q9Y5X0 201 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms