RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 ERMARDQ5T6L9 678 aa15.55■□□□□ 0.08
PTCD1-204ENST00000430982 C9orf64Q5T6V5 341 aa15.55■□□□□ 0.08
PTCD1-204ENST00000430982 ZNF776Q68DI1 518 aaPredicted RBP15.55■□□□□ 0.08
PTCD1-204ENST00000430982 SLC36A4Q6YBV0 504 aa15.55■□□□□ 0.08
PTCD1-204ENST00000430982 HDDC3Q8N4P3 179 aa15.55■□□□□ 0.08
PTCD1-204ENST00000430982 MINDY1Q8N5J2 469 aa15.55■□□□□ 0.08
PTCD1-204ENST00000430982 DEFB119Q8N690 84 aa15.55■□□□□ 0.08
PTCD1-204ENST00000430982 TC2NQ8N9U0 490 aa15.55■□□□□ 0.08
PTCD1-204ENST00000430982 RETREG1Q9H6L5 497 aa15.55■□□□□ 0.08
PTCD1-204ENST00000430982 CATSPERBQ9H7T0 1116 aa15.55■□□□□ 0.08
PTCD1-204ENST00000430982 NDFIP2Q9NV92 336 aa15.55■□□□□ 0.08
PTCD1-204ENST00000430982 MUC22E2RYF6 1773 aaPredicted RBP15.54■□□□□ 0.08
PTCD1-204ENST00000430982 BPTFQ12830 3046 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 MYO1FO00160 1098 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 CBX4O00257 560 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 KALRNO60229 2985 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 BNIP3LO60238 219 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 RAMP2O60895 175 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 RNASEH1O60930 286 aaKnown RBP15.54■□□□□ 0.08
PTCD1-204ENST00000430982 NDUFS2O75306 463 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 DNTTP04053 509 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 CFIP05156 583 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 TMEM253P0C7T8 217 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 VAV1P15498 845 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 GLDCP23378 1020 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 PCK1P35558 622 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 ACVRL1P37023 503 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 RPS14P62263 151 aaKnown RBP15.54■□□□□ 0.08
PTCD1-204ENST00000430982 SLC14A1Q13336 389 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 DLG2Q15700 870 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 LINGO4Q6UY18 593 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 RABEPKQ7Z6M1 372 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 METTL3Q86U44 580 aaKnown RBP15.54■□□□□ 0.08
PTCD1-204ENST00000430982 FAM124AQ86V42 546 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 ZNF354CQ86Y25 554 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 STK40Q8N2I9 435 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 SH2D3CQ8N5H7 860 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 RTL3Q8N8U3 475 aaKnown RBP15.54■□□□□ 0.08
PTCD1-204ENST00000430982 ATP11CQ8NB49 1132 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 PTPRN2Q92932 1015 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 KCTD15Q96SI1 283 aaPredicted RBP15.54■□□□□ 0.08
PTCD1-204ENST00000430982 CCDC86Q9H6F5 360 aaKnown RBP15.54■□□□□ 0.08
PTCD1-204ENST00000430982 ZWILCHQ9H900 591 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 ITM2CQ9NQX7 267 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 USP36Q9P275 1121 aaKnown RBP15.54■□□□□ 0.08
PTCD1-204ENST00000430982 UVRAGQ9P2Y5 699 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 DKK4Q9UBT3 224 aa15.54■□□□□ 0.08
PTCD1-204ENST00000430982 K7ERQ8 282 aa15.53■□□□□ 0.08
PTCD1-204ENST00000430982 EEF2KO00418 725 aaKnown RBP15.53■□□□□ 0.08
PTCD1-204ENST00000430982 ARHGAP33O14559 1287 aa15.53■□□□□ 0.08
PTCD1-204ENST00000430982 DAPK3O43293 454 aa15.53■□□□□ 0.08
PTCD1-204ENST00000430982 ATP9BO43861 1147 aa15.53■□□□□ 0.08
PTCD1-204ENST00000430982 MT-CO1P00395 513 aa15.53■□□□□ 0.08
PTCD1-204ENST00000430982 SRCP12931 536 aa15.53■□□□□ 0.08
PTCD1-204ENST00000430982 TCF4P15884 667 aa15.53■□□□□ 0.08
PTCD1-204ENST00000430982 IL1R2P27930 398 aa15.53■□□□□ 0.08
PTCD1-204ENST00000430982 CD6P30203 668 aa15.53■□□□□ 0.08
PTCD1-204ENST00000430982 ETFBP38117 255 aa15.53■□□□□ 0.08
PTCD1-204ENST00000430982 PSMD8P48556 350 aa15.53■□□□□ 0.08
PTCD1-204ENST00000430982 VASPP50552 380 aaPredicted RBP15.53■□□□□ 0.08
PTCD1-204ENST00000430982 TPMTP51580 245 aa15.53■□□□□ 0.08
PTCD1-204ENST00000430982 ATXN3P54252 364 aaPredicted RBP15.53■□□□□ 0.08
PTCD1-204ENST00000430982 POLD3Q15054 466 aaPredicted RBP15.53■□□□□ 0.08
PTCD1-204ENST00000430982 SMTNL2Q2TAL5 461 aa15.53■□□□□ 0.08
PTCD1-204ENST00000430982 PPP6R3Q5H9R7 873 aaPredicted RBP15.53■□□□□ 0.08
PTCD1-204ENST00000430982 RETSATQ6NUM9 610 aa15.53■□□□□ 0.08
PTCD1-204ENST00000430982 MMAAQ8IVH4 418 aaKnown RBP15.53■□□□□ 0.08
PTCD1-204ENST00000430982 NIPA2Q8N8Q9 360 aa15.53■□□□□ 0.08
PTCD1-204ENST00000430982 GANCQ8TET4 914 aa15.53■□□□□ 0.08
PTCD1-204ENST00000430982 FRS2Q8WU20 508 aa15.53■□□□□ 0.08
PTCD1-204ENST00000430982 HSPH1Q92598 858 aa15.53■□□□□ 0.08
PTCD1-204ENST00000430982 ARHGEF2Q92974 986 aaKnown RBP15.53■□□□□ 0.08
PTCD1-204ENST00000430982 TOE1Q96GM8 510 aaKnown RBP15.53■□□□□ 0.08
PTCD1-204ENST00000430982 GTPBP2Q9BX10 602 aaKnown RBP15.53■□□□□ 0.08
PTCD1-204ENST00000430982 RSPH9Q9H1X1 276 aaPredicted RBP15.53■□□□□ 0.08
PTCD1-204ENST00000430982 HS3ST2Q9Y278 367 aa15.53■□□□□ 0.08
PTCD1-204ENST00000430982 PTPRBP23467 1997 aa15.53■□□□□ 0.08
PTCD1-204ENST00000430982 TMEM110-MUSTN1A8MSY1 372 aa15.52■□□□□ 0.08
PTCD1-204ENST00000430982 EIF3CLB5ME19 914 aaKnown RBP15.52■□□□□ 0.08
PTCD1-204ENST00000430982 FGF10O15520 208 aaPredicted RBP15.52■□□□□ 0.08
PTCD1-204ENST00000430982 ZMPSTE24O75844 475 aa15.52■□□□□ 0.08
PTCD1-204ENST00000430982 OXTRP30559 389 aa15.52■□□□□ 0.08
PTCD1-204ENST00000430982 HTR7P34969 479 aa15.52■□□□□ 0.08
PTCD1-204ENST00000430982 ZBTB16Q05516 673 aa15.52■□□□□ 0.08
PTCD1-204ENST00000430982 TRIP6Q15654 476 aaKnown RBP15.52■□□□□ 0.08
PTCD1-204ENST00000430982 TTC31Q49AM3 519 aaPredicted RBP15.52■□□□□ 0.08
PTCD1-204ENST00000430982 BOLA3Q53S33 107 aa15.52■□□□□ 0.08
PTCD1-204ENST00000430982 KCNT1Q5JUK3 1230 aa15.52■□□□□ 0.08
PTCD1-204ENST00000430982 Q6ZVU0 165 aa15.52■□□□□ 0.08
PTCD1-204ENST00000430982 CYP4V2Q6ZWL3 525 aaPredicted RBP15.52■□□□□ 0.08
PTCD1-204ENST00000430982 GLRX5Q86SX6 157 aa15.52■□□□□ 0.08
PTCD1-204ENST00000430982 PSTKQ8IV42 348 aaKnown RBP15.52■□□□□ 0.08
PTCD1-204ENST00000430982 OR2I1PQ8NGU4 316 aa15.52■□□□□ 0.08
PTCD1-204ENST00000430982 OR8D1Q8WZ84 308 aa15.52■□□□□ 0.08
PTCD1-204ENST00000430982 FAM129BQ96TA1 746 aa15.52■□□□□ 0.08
PTCD1-204ENST00000430982 EIF3CQ99613 913 aaKnown RBP15.52■□□□□ 0.08
PTCD1-204ENST00000430982 ACE2Q9BYF1 805 aaPredicted RBP15.52■□□□□ 0.08
PTCD1-204ENST00000430982 MAGEH1Q9H213 219 aa15.52■□□□□ 0.08
PTCD1-204ENST00000430982 PABPC3Q9H361 631 aaKnown RBP15.52■□□□□ 0.08
PTCD1-204ENST00000430982 HPCAL4Q9UM19 191 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms