RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 REXO2Q9Y3B8 237 aaKnown RBP16.66■□□□□ 0.26
RIF1-204ENST00000430328 ZSCAN5CA6NGD5 496 aaPredicted RBP16.65■□□□□ 0.26
RIF1-204ENST00000430328 ZBTB14O43829 449 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 OR10H3O60404 316 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 ZNF7P17097 686 aaPredicted RBP16.65■□□□□ 0.26
RIF1-204ENST00000430328 ZSCAN5AQ9BUG6 496 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 PHF20Q9BVI0 1012 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 CYP1A1P04798 512 aaPredicted RBP16.65■□□□□ 0.26
RIF1-204ENST00000430328 TYMPP19971 482 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 TAS2R41P59536 307 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 SRSF11Q05519 484 aaKnown RBP16.65■□□□□ 0.26
RIF1-204ENST00000430328 PAGE2Q7Z2X7 111 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 PARP8Q8N3A8 854 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 OXER1Q8TDS5 423 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 ZNF471Q9BX82 626 aaPredicted RBP16.65■□□□□ 0.26
RIF1-204ENST00000430328 GRHL1Q9NZI5 618 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 MYH6P13533 1939 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 PLK4O00444 970 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 GNAO1P09471 354 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 FXR1P51114 621 aaKnown RBP eCLIP16.65■□□□□ 0.26
RIF1-204ENST00000430328 ILF3Q12906 894 aaKnown RBP eCLIP16.65■□□□□ 0.262e-9■■■□□ 17.4
RIF1-204ENST00000430328 GRM4Q14833 912 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 SPDYCQ5MJ68 293 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 SRBD1Q8N5C6 995 aaKnown RBP16.65■□□□□ 0.26
RIF1-204ENST00000430328 RNF31Q96EP0 1072 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 LY9Q9HBG7 655 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 AAASQ9NRG9 546 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 TCHHQ07283 1943 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 ERBB3P21860 1342 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 A0A087X1B8 175 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 STOMP27105 288 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 TEFMQ96QE5 360 aaKnown RBP16.65■□□□□ 0.26
RIF1-204ENST00000430328 TMEM121Q9BTD3 319 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 SCAF8Q9UPN6 1271 aaKnown RBP16.65■□□□□ 0.26
RIF1-204ENST00000430328 TTC34A8MYJ7 566 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 ORC5O43913 435 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 NUAK1O60285 661 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 ITGB6P18564 788 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 RPL3P39023 403 aaKnown RBP16.65■□□□□ 0.26
RIF1-204ENST00000430328 MBTD1Q05BQ5 628 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 CIAPIN1Q6FI81 312 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 KCNMB4Q86W47 210 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 ZFP28Q8NHY6 868 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 TCP10LQ8TDR4 215 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 KPNA3O00505 521 aaPredicted RBP16.65■□□□□ 0.26
RIF1-204ENST00000430328 OR10H2O60403 315 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 TDP2O95551 362 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 KYAT3Q6YP21 454 aaKnown RBP16.65■□□□□ 0.26
RIF1-204ENST00000430328 ASB12Q8WXK4 309 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 TUBGCP5Q96RT8 1024 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 NAALADL1Q9UQQ1 740 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 PRKAB1Q9Y478 270 aa16.65■□□□□ 0.26
RIF1-204ENST00000430328 MAP3K6O95382 1288 aa16.64■□□□□ 0.26
RIF1-204ENST00000430328 IFNA7P01567 189 aa16.64■□□□□ 0.26
RIF1-204ENST00000430328 CDK16Q00536 496 aa16.64■□□□□ 0.26
RIF1-204ENST00000430328 SGCGQ13326 291 aa16.64■□□□□ 0.26
RIF1-204ENST00000430328 VMACQ2NL98 169 aa16.64■□□□□ 0.26
RIF1-204ENST00000430328 HSDL1Q3SXM5 330 aa16.64■□□□□ 0.26
RIF1-204ENST00000430328 PNMA5Q96PV4 448 aa16.64■□□□□ 0.26
RIF1-204ENST00000430328 PANX3Q96QZ0 392 aa16.64■□□□□ 0.26
RIF1-204ENST00000430328 VPS28Q9UK41 221 aa16.64■□□□□ 0.26
RIF1-204ENST00000430328 USP21Q9UK80 565 aa16.64■□□□□ 0.26
RIF1-204ENST00000430328 SAMHD1Q9Y3Z3 626 aaKnown RBP16.64■□□□□ 0.26
RIF1-204ENST00000430328 C9IYK1 514 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 NR2F1P10589 423 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 ALDH7A1P49419 539 aaKnown RBP16.64■□□□□ 0.25
RIF1-204ENST00000430328 GJA9P57773 515 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 ADGRG2Q8IZP9 1017 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 APOPT1Q96IL0 206 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 REEP2Q9BRK0 252 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 LMAN2LQ9H0V9 348 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 EIF3KQ9UBQ5 218 aaKnown RBP16.64■□□□□ 0.25
RIF1-204ENST00000430328 ZSCAN5BA6NJL1 495 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 KBTBD13C9JR72 458 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 OR1I1O60431 355 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 HMGCRP04035 888 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 GSTT2BP0CG30 244 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 CDC25CP30307 473 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 HUNKP57058 714 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 SHC4Q6S5L8 630 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 CRTC3Q6UUV7 619 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 CHST4Q8NCG5 386 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 FBXO32Q969P5 355 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 C1QTNF7Q9BXJ2 289 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 ABHD14A-ACY1A0A1B0GW23 586 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 C2CD2LO14523 706 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 SEPHS1P49903 392 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 BOP1Q14137 746 aaKnown RBP16.64■□□□□ 0.25
RIF1-204ENST00000430328 CWF19L1Q69YN2 538 aaKnown RBP16.64■□□□□ 0.25
RIF1-204ENST00000430328 FNDC11Q9BVV2 318 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 POLR2EP19388 210 aaKnown RBP16.64■□□□□ 0.25
RIF1-204ENST00000430328 KLRC1P26715 233 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 PTDSS1P48651 473 aaKnown RBP16.64■□□□□ 0.25
RIF1-204ENST00000430328 PREPLQ4J6C6 727 aaPredicted RBP16.64■□□□□ 0.25
RIF1-204ENST00000430328 C12orf56Q8IXR9 622 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 PDLIM2Q96JY6 352 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 FBXO10Q9UK96 956 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 GNEQ9Y223 722 aaKnown RBP16.64■□□□□ 0.25
RIF1-204ENST00000430328 NCKAP1Q9Y2A7 1128 aa16.64■□□□□ 0.25
RIF1-204ENST00000430328 ABRQ12979 859 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms