RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	PTPN9	P43378	593 aa		18.14	■□□□□ 0.49
MRPL28-203	ENST00000429738	ABCG1	P45844	678 aa		18.14	■□□□□ 0.49
MRPL28-203	ENST00000429738	IL9R	Q01113	521 aa		18.14	■□□□□ 0.49
MRPL28-203	ENST00000429738	UBXN1	Q04323	297 aa		18.14	■□□□□ 0.49
MRPL28-203	ENST00000429738	C15orf59	Q2T9L4	293 aa	Predicted RBP	18.14	■□□□□ 0.49
MRPL28-203	ENST00000429738	MANEAL	Q5VSG8	457 aa		18.14	■□□□□ 0.49
MRPL28-203	ENST00000429738	STRADA	Q7RTN6	431 aa		18.14	■□□□□ 0.49
MRPL28-203	ENST00000429738	PHF13	Q86YI8	300 aa	Predicted RBP	18.14	■□□□□ 0.49
MRPL28-203	ENST00000429738	ATP11C	Q8NB49	1132 aa		18.14	■□□□□ 0.49
MRPL28-203	ENST00000429738	OR2A12	Q8NGT7	310 aa		18.14	■□□□□ 0.49
MRPL28-203	ENST00000429738	DCBLD2	Q96PD2	775 aa		18.14	■□□□□ 0.49
MRPL28-203	ENST00000429738	ZYG11B	Q9C0D3	744 aa		18.14	■□□□□ 0.49
MRPL28-203	ENST00000429738	TBC1D3D	A0A087WVF3	549 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	TBC1D3I	A0A087WXS9	549 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	TBC1D3E	A0A087X179	549 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	TBC1D3K	A0A087X1G2	549 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738		A0A1B0GTQ1	180 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	TBC1D3F	A6NER0	549 aa	Predicted RBP	18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	TBC1D3L	B9A6J9	549 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	SMAD6	O43541	496 aa	Known RBP	18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	RTN2	O75298	545 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	ZMPSTE24	O75844	475 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	GJB6	O95452	261 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	TBC1D3H	P0C7X1	549 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	CDK4	P11802	303 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	JUP	P14923	745 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	GLDC	P23378	1020 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	RRM1	P23921	792 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	CD38	P28907	300 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	SDC4	P31431	198 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	ADRA1B	P35368	520 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	C21orf59	P57076	290 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	TYRO3	Q06418	890 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	C19orf57	Q0VDD7	668 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	CNTN1	Q12860	1018 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	CDO1	Q16878	200 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	CLEC16A	Q2KHT3	1053 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	TBC1D3G	Q6DHY5	549 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	TBC1D3C	Q6IPX1	549 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	PHLDB2	Q86SQ0	1253 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	TRIM69	Q86WT6	500 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	TBC1D3	Q8IZP1	549 aa	Predicted RBP	18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	OR7D4	Q8NG98	312 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	OSBPL2	Q9H1P3	480 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	RETREG1	Q9H6L5	497 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	TMEM63C	Q9P1W3	806 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	NEU3	Q9UQ49	428 aa		18.13	■□□□□ 0.49
MRPL28-203	ENST00000429738	COL5A1	P20908	1838 aa	Predicted RBP	18.12	■□□□□ 0.49
MRPL28-203	ENST00000429738	TCRBV5S1A1T	A0A578	114 aa		18.12	■□□□□ 0.49
MRPL28-203	ENST00000429738	TK2	O00142	265 aa		18.12	■□□□□ 0.49
MRPL28-203	ENST00000429738	ZNF821	O75541	412 aa	Predicted RBP	18.12	■□□□□ 0.49
MRPL28-203	ENST00000429738	C1S	P09871	688 aa		18.12	■□□□□ 0.49
MRPL28-203	ENST00000429738	KRT3	P12035	628 aa		18.12	■□□□□ 0.49
MRPL28-203	ENST00000429738	ATP1A3	P13637	1013 aa		18.12	■□□□□ 0.49
MRPL28-203	ENST00000429738	CDK11B	P21127	795 aa	Known RBP	18.12	■□□□□ 0.49
MRPL28-203	ENST00000429738	CHRNA3	P32297	505 aa		18.12	■□□□□ 0.49
MRPL28-203	ENST00000429738	NSF	P46459	744 aa	Known RBP	18.12	■□□□□ 0.49
MRPL28-203	ENST00000429738	HDAC4	P56524	1084 aa		18.12	■□□□□ 0.49
MRPL28-203	ENST00000429738	TAS2R38	P59533	333 aa		18.12	■□□□□ 0.49
MRPL28-203	ENST00000429738	ARL13B	Q3SXY8	428 aa		18.12	■□□□□ 0.49
MRPL28-203	ENST00000429738	PIP5KL1	Q5T9C9	394 aa		18.12	■□□□□ 0.49
MRPL28-203	ENST00000429738	C22orf39	Q6P5X5	142 aa		18.12	■□□□□ 0.49
MRPL28-203	ENST00000429738	LINGO4	Q6UY18	593 aa		18.12	■□□□□ 0.49
MRPL28-203	ENST00000429738	MON1B	Q7L1V2	547 aa		18.12	■□□□□ 0.49
MRPL28-203	ENST00000429738	NLRP14	Q86W24	1093 aa		18.12	■□□□□ 0.49
MRPL28-203	ENST00000429738	C3orf20	Q8ND61	904 aa		18.12	■□□□□ 0.49
MRPL28-203	ENST00000429738	TMIE	Q8NEW7	156 aa		18.12	■□□□□ 0.49
MRPL28-203	ENST00000429738	SKA1	Q96BD8	255 aa		18.12	■□□□□ 0.49
MRPL28-203	ENST00000429738	SERAC1	Q96JX3	654 aa		18.12	■□□□□ 0.49
MRPL28-203	ENST00000429738	PCMTD1	Q96MG8	357 aa	Predicted RBP	18.12	■□□□□ 0.49
MRPL28-203	ENST00000429738	ELF4	Q99607	663 aa	Predicted RBP	18.12	■□□□□ 0.49
MRPL28-203	ENST00000429738	ADAM22	Q9P0K1	906 aa		18.12	■□□□□ 0.49
MRPL28-203	ENST00000429738	OR12D3	Q9UGF7	316 aa		18.12	■□□□□ 0.49
MRPL28-203	ENST00000429738	CXorf51A	A0A1B0GTR3	108 aa		18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	RNF103	O00237	685 aa		18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	ENC1	O14682	589 aa		18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	BNIP3L	O60238	219 aa		18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	ZIC2	O95409	532 aa	Predicted RBP	18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	CALB1	P05937	261 aa		18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	RFC1	P35251	1148 aa	Predicted RBP	18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	NUDT1	P36639	197 aa		18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	ARF5	P84085	180 aa		18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	GNA12	Q03113	381 aa		18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	SLC20A2	Q08357	652 aa		18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	SHB	Q15464	509 aa		18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	POM121L1P	Q3SYA9	428 aa		18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	PRAMEF14	Q5SWL7	426 aa		18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	NAPEPLD	Q6IQ20	393 aa		18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	PRPF39	Q86UA1	669 aa	Known RBP	18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	GATAD2A	Q86YP4	633 aa		18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	AOPEP	Q8N6M6	819 aa		18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	CHST14	Q8NCH0	376 aa		18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	NTAN1	Q96AB6	310 aa		18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	NXPE2	Q96DL1	559 aa		18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	CCDC114	Q96M63	670 aa		18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	BPIFA3	Q9BQP9	254 aa		18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	CEP44	Q9C0F1	390 aa		18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	PREB	Q9HCU5	417 aa		18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	AASDHPPT	Q9NRN7	309 aa		18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	NDFIP2	Q9NV92	336 aa		18.11	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms