RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 DCLK1O15075 740 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 HDAC3O15379 428 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 GRID2O43424 1007 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 CRTAMO95727 393 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 LGALS2P05162 132 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 INSRRP14616 1297 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 XRCC1P18887 633 aaPredicted RBP8.97□□□□□ -0.97
CDH13-202ENST00000428848 PMLP29590 882 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 MATKP42679 507 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 ACADSBP45954 432 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 THOP1P52888 689 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 BCAT1P54687 386 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 NR1H2P55055 460 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 CSE1LP55060 971 aaKnown RBP8.97□□□□□ -0.97
CDH13-202ENST00000428848 MYBPC1Q00872 1141 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 MS4A2Q01362 244 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 ARHGAP1Q07960 439 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 ITGA7Q13683 1181 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 CEACAM7Q14002 265 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 DPYSQ14117 519 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 RFTN1Q14699 578 aaPredicted RBP8.97□□□□□ -0.97
CDH13-202ENST00000428848 MYLK3Q32MK0 819 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 ZNF792Q3KQV3 632 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 SLC25A52Q3SY17 297 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 PPM1LQ5SGD2 360 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 STRA8Q7Z7C7 330 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 SETD3Q86TU7 594 aaPredicted RBP8.97□□□□□ -0.97
CDH13-202ENST00000428848 ZNF410Q86VK4 478 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 SNX32Q86XE0 403 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 ERI1Q8IV48 349 aaKnown RBP8.97□□□□□ -0.97
CDH13-202ENST00000428848 PGAM4Q8N0Y7 254 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.97□□□□□ -0.97
CDH13-202ENST00000428848 CATSPER1Q8NEC5 780 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 OR52K1Q8NGK4 314 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 URGCPQ8TCY9 931 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 RNF139Q8WU17 664 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 ITPKCQ96DU7 683 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 ZMAT2Q96NC0 199 aaKnown RBP8.97□□□□□ -0.97
CDH13-202ENST00000428848 PGLYRP2Q96PD5 576 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 CEP41Q9BYV8 373 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 SLC2A11Q9BYW1 496 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 TANC1Q9C0D5 1861 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 ILKAPQ9H0C8 392 aaPredicted RBP8.97□□□□□ -0.97
CDH13-202ENST00000428848 TSPYL2Q9H2G4 693 aaPredicted RBP8.97□□□□□ -0.97
CDH13-202ENST00000428848 PLGRKTQ9HBL7 147 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 NMRAL1Q9HBL8 299 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 PACSIN3Q9UKS6 424 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 PCDHGB4Q9UN71 923 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 LZTS1Q9Y250 596 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 PCDHGB5Q9Y5G0 923 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 AP4B1Q9Y6B7 739 aa8.97□□□□□ -0.97
CDH13-202ENST00000428848 TRIM43BA6NCK2 446 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 TMEM247A6NEH6 219 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 RRN3P2A6NIE6 340 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 TXNDC9O14530 226 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 AIM2O14862 343 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 HCRTO43612 131 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 AP2A1O95782 977 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 ALDH2P05091 517 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 CHRNGP07510 517 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 LCP1P13796 627 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 MPSTP25325 297 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 SLC5A2P31639 672 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 HOXD12P35452 270 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 SERPINB5P36952 375 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 DPP6P42658 865 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 TRPC1P48995 793 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 NUDT2P50583 147 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 RPL14P50914 215 aaKnown RBP8.96□□□□□ -0.97
CDH13-202ENST00000428848 PRKAA2P54646 552 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 OLIG2Q13516 323 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 IRF5Q13568 498 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 DLG2Q15700 870 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 DCAF4L1Q3SXM0 396 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 BSPRYQ5W0U4 402 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 ZYG11AQ6WRX3 759 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 BNC2Q6ZN30 1099 aaPredicted RBP8.96□□□□□ -0.97
CDH13-202ENST00000428848 DPP9Q86TI2 863 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 FAM131BQ86XD5 332 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 TP53INP2Q8IXH6 220 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 LRRC52Q8N7C0 313 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 NETO2Q8NC67 525 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 RDH11Q8TC12 318 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 DLG3Q92796 817 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 ZNF669Q96BR6 464 aaPredicted RBP8.96□□□□□ -0.97
CDH13-202ENST00000428848 CDRT15Q96T59 188 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 AGAP2Q99490 1192 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 IL22Q9GZX6 179 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 WDR55Q9H6Y2 383 aaPredicted RBP8.96□□□□□ -0.97
CDH13-202ENST00000428848 CAB39LQ9H9S4 337 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 PLEKHA5Q9HAU0 1116 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 PFDN4Q9NQP4 134 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 TUBA8Q9NY65 449 aaPredicted RBP8.96□□□□□ -0.97
CDH13-202ENST00000428848 MID2Q9UJV3 735 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 CNOT11Q9UKZ1 510 aaKnown RBP8.96□□□□□ -0.97
CDH13-202ENST00000428848 FAF1Q9UNN5 650 aaPredicted RBP8.96□□□□□ -0.97
CDH13-202ENST00000428848 AK5Q9Y6K8 562 aa8.96□□□□□ -0.97
CDH13-202ENST00000428848 PCNTO95613 3336 aa8.96□□□□□ -0.98
CDH13-202ENST00000428848 SHROOM3Q8TF72 1996 aa8.96□□□□□ -0.98
CDH13-202ENST00000428848 TARM1B6A8C7 271 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms