RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 PSMB7Q99436 277 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 DUSP23Q9BVJ7 150 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 USP29Q9HBJ7 922 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 ASNSD1Q9NWL6 643 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 VPS51Q9UID3 782 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 TBC1D30Q9Y2I9 924 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 U3KQA8 63 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 SMAD6O43541 496 aaKnown RBP18.73■□□□□ 0.59
UPK3BP1-201ENST00000428678 CNTN5O94779 1100 aa18.73■□□□□ 0.59
UPK3BP1-201ENST00000428678 USP8P40818 1118 aa18.73■□□□□ 0.59
UPK3BP1-201ENST00000428678 PPP1R2P41236 205 aa18.73■□□□□ 0.59
UPK3BP1-201ENST00000428678 MAPK8IP2Q13387 824 aaPredicted RBP18.73■□□□□ 0.59
UPK3BP1-201ENST00000428678 ARSIQ5FYB1 569 aa18.73■□□□□ 0.59
UPK3BP1-201ENST00000428678 C3orf38Q5JPI3 329 aa18.73■□□□□ 0.59
UPK3BP1-201ENST00000428678 LINGO4Q6UY18 593 aa18.73■□□□□ 0.59
UPK3BP1-201ENST00000428678 PASD1Q8IV76 773 aa18.73■□□□□ 0.59
UPK3BP1-201ENST00000428678 FAM181AQ8N9Y4 354 aa18.73■□□□□ 0.59
UPK3BP1-201ENST00000428678 PPP1R13BQ96KQ4 1090 aa18.73■□□□□ 0.59
UPK3BP1-201ENST00000428678 HDAC8Q9BY41 377 aa18.73■□□□□ 0.59
UPK3BP1-201ENST00000428678 DPH1Q9BZG8 443 aa18.73■□□□□ 0.59
UPK3BP1-201ENST00000428678 TNKS2Q9H2K2 1166 aa18.73■□□□□ 0.59
UPK3BP1-201ENST00000428678 ASCL3Q9NQ33 180 aa18.73■□□□□ 0.59
UPK3BP1-201ENST00000428678 CTNND2Q9UQB3 1225 aa18.73■□□□□ 0.59
UPK3BP1-201ENST00000428678 RP1P56715 2156 aa18.72■□□□□ 0.59
UPK3BP1-201ENST00000428678 RNF103O00237 685 aa18.72■□□□□ 0.59
UPK3BP1-201ENST00000428678 RECQLP46063 649 aaPredicted RBP18.72■□□□□ 0.59
UPK3BP1-201ENST00000428678 VAC14Q08AM6 782 aa18.72■□□□□ 0.59
UPK3BP1-201ENST00000428678 LY6DQ14210 128 aa18.72■□□□□ 0.59
UPK3BP1-201ENST00000428678 CDKN3Q16667 212 aa18.72■□□□□ 0.59
UPK3BP1-201ENST00000428678 KIF26BQ2KJY2 2108 aa18.72■□□□□ 0.59
UPK3BP1-201ENST00000428678 TMEM259Q4ZIN3 620 aa18.72■□□□□ 0.59
UPK3BP1-201ENST00000428678 ALFQ53S48 1182 aa18.72■□□□□ 0.59
UPK3BP1-201ENST00000428678 C22orf39Q6P5X5 142 aa18.72■□□□□ 0.59
UPK3BP1-201ENST00000428678 C11orf57Q6ZUT1 292 aaPredicted RBP18.72■□□□□ 0.59
UPK3BP1-201ENST00000428678 FAM183BPQ6ZVS7 135 aa18.72■□□□□ 0.59
UPK3BP1-201ENST00000428678 ENOSF1Q7L5Y1 443 aa18.72■□□□□ 0.59
UPK3BP1-201ENST00000428678 DCP2Q8IU60 420 aaKnown RBP18.72■□□□□ 0.59
UPK3BP1-201ENST00000428678 ZNF548Q8NEK5 533 aaPredicted RBP18.72■□□□□ 0.59
UPK3BP1-201ENST00000428678 FAM174AQ8TBP5 190 aa18.72■□□□□ 0.59
UPK3BP1-201ENST00000428678 PPP1R16AQ96I34 528 aa18.72■□□□□ 0.59
UPK3BP1-201ENST00000428678 SEMA4CQ9C0C4 833 aa18.72■□□□□ 0.59
UPK3BP1-201ENST00000428678 IL36AQ9UHA7 158 aa18.72■□□□□ 0.59
UPK3BP1-201ENST00000428678 MAN1B1Q9UKM7 699 aa18.72■□□□□ 0.59
UPK3BP1-201ENST00000428678 SATB2Q9UPW6 733 aa18.72■□□□□ 0.59
UPK3BP1-201ENST00000428678 BICDL2A1A5D9 508 aa18.71■□□□□ 0.59
UPK3BP1-201ENST00000428678 CPED1A4D0V7 1026 aa18.71■□□□□ 0.59
UPK3BP1-201ENST00000428678 POM121BA6NF01 834 aa18.71■□□□□ 0.59
UPK3BP1-201ENST00000428678 M0QYT0 321 aa18.71■□□□□ 0.59
UPK3BP1-201ENST00000428678 DAB1O75553 588 aa18.71■□□□□ 0.59
UPK3BP1-201ENST00000428678 ENDOD1O94919 500 aa18.71■□□□□ 0.59
UPK3BP1-201ENST00000428678 ADCY5O95622 1261 aa18.71■□□□□ 0.59
UPK3BP1-201ENST00000428678 GNA14O95837 355 aa18.71■□□□□ 0.59
UPK3BP1-201ENST00000428678 RBMS1P29558 406 aaKnown RBP18.71■□□□□ 0.59
UPK3BP1-201ENST00000428678 FZD2Q14332 565 aa18.71■□□□□ 0.59
UPK3BP1-201ENST00000428678 ARHGAP44Q17R89 818 aa18.71■□□□□ 0.59
UPK3BP1-201ENST00000428678 ISXQ2M1V0 245 aa18.71■□□□□ 0.59
UPK3BP1-201ENST00000428678 C5orf22Q49AR2 442 aa18.71■□□□□ 0.59
UPK3BP1-201ENST00000428678 ZCCHC8Q6NZY4 707 aaKnown RBP18.71■□□□□ 0.59
UPK3BP1-201ENST00000428678 GJB7Q6PEY0 223 aa18.71■□□□□ 0.59
UPK3BP1-201ENST00000428678 KYAT3Q6YP21 454 aaKnown RBP18.71■□□□□ 0.59
UPK3BP1-201ENST00000428678 WDTC1Q8N5D0 677 aa18.71■□□□□ 0.59
UPK3BP1-201ENST00000428678 DCAF4L2Q8NA75 395 aa18.71■□□□□ 0.59
UPK3BP1-201ENST00000428678 CRACR2AQ9BSW2 395 aa18.71■□□□□ 0.59
UPK3BP1-201ENST00000428678 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.71■□□□□ 0.59
UPK3BP1-201ENST00000428678 SLC17A9Q9BYT1 436 aa18.71■□□□□ 0.59
UPK3BP1-201ENST00000428678 IPO11Q9UI26 975 aaKnown RBP18.71■□□□□ 0.59
UPK3BP1-201ENST00000428678 SNX10Q9Y5X0 201 aa18.71■□□□□ 0.59
UPK3BP1-201ENST00000428678 H3BM21 787 aa18.7■□□□□ 0.58
UPK3BP1-201ENST00000428678 LEFTY1O75610 366 aa18.7■□□□□ 0.58
UPK3BP1-201ENST00000428678 PAK4O96013 591 aaPredicted RBP18.7■□□□□ 0.58
UPK3BP1-201ENST00000428678 CSF2P04141 144 aa18.7■□□□□ 0.58
UPK3BP1-201ENST00000428678 TGM2P21980 687 aa18.7■□□□□ 0.58
UPK3BP1-201ENST00000428678 CLCN6P51797 869 aa18.7■□□□□ 0.58
UPK3BP1-201ENST00000428678 NEK3P51956 506 aa18.7■□□□□ 0.58
UPK3BP1-201ENST00000428678 STX17P56962 302 aa18.7■□□□□ 0.58
UPK3BP1-201ENST00000428678 RPS21P63220 83 aaKnown RBP18.7■□□□□ 0.58
UPK3BP1-201ENST00000428678 GUSBP11Q6P575 273 aa18.7■□□□□ 0.58
UPK3BP1-201ENST00000428678 OLFML1Q6UWY5 402 aa18.7■□□□□ 0.58
UPK3BP1-201ENST00000428678 DPY19L3Q6ZPD9 716 aa18.7■□□□□ 0.58
UPK3BP1-201ENST00000428678 EFL1Q7Z2Z2 1120 aaKnown RBP18.7■□□□□ 0.58
UPK3BP1-201ENST00000428678 TFAP2DQ7Z6R9 452 aa18.7■□□□□ 0.58
UPK3BP1-201ENST00000428678 C1orf131Q8NDD1 294 aaKnown RBP18.7■□□□□ 0.58
UPK3BP1-201ENST00000428678 BOD1L1Q8NFC6 3051 aa18.7■□□□□ 0.58
UPK3BP1-201ENST00000428678 ATXN7L3BQ96GX2 97 aa18.7■□□□□ 0.58
UPK3BP1-201ENST00000428678 BMFQ96LC9 184 aa18.7■□□□□ 0.58
UPK3BP1-201ENST00000428678 TKTL2Q9H0I9 626 aa18.7■□□□□ 0.58
UPK3BP1-201ENST00000428678 SYNCQ9H7C4 482 aa18.7■□□□□ 0.58
UPK3BP1-201ENST00000428678 PIGVQ9NUD9 493 aa18.7■□□□□ 0.58
UPK3BP1-201ENST00000428678 HS3ST3A1Q9Y663 406 aa18.7■□□□□ 0.58
UPK3BP1-201ENST00000428678 A0A0D9SEW6 157 aa18.69■□□□□ 0.58
UPK3BP1-201ENST00000428678 BECN2A8MW95 431 aa18.69■□□□□ 0.58
UPK3BP1-201ENST00000428678 PPP1R3GB7ZBB8 358 aa18.69■□□□□ 0.58
UPK3BP1-201ENST00000428678 RAD51BO15315 384 aa18.69■□□□□ 0.58
UPK3BP1-201ENST00000428678 ERBB2P04626 1255 aa18.69■□□□□ 0.58
UPK3BP1-201ENST00000428678 C6P13671 934 aa18.69■□□□□ 0.58
UPK3BP1-201ENST00000428678 NME1P15531 152 aaKnown RBP18.69■□□□□ 0.58
UPK3BP1-201ENST00000428678 NOS2P35228 1153 aa18.69■□□□□ 0.58
UPK3BP1-201ENST00000428678 FGL2Q14314 439 aa18.69■□□□□ 0.58
UPK3BP1-201ENST00000428678 DEFB133Q30KQ1 61 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms