RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 UBA6A0AVT1 1052 aaPredicted RBP13.6□□□□□ -0.23
USP42-203ENST00000426246 CCDC189A1A4V9 331 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 FAM149AA5PLN7 773 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 SUPT7LO94864 414 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 KLHL2O95198 593 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 XRCC1P18887 633 aaPredicted RBP13.6□□□□□ -0.23
USP42-203ENST00000426246 ATG14Q6ZNE5 492 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 ACAD11Q709F0 780 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 DDIASQ8IXT1 998 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 TRIML2Q8N7C3 387 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 KLHL5Q96PQ7 755 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 ACE2Q9BYF1 805 aaPredicted RBP13.6□□□□□ -0.23
USP42-203ENST00000426246 ZNF212Q9UDV6 495 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 OR12D3Q9UGF7 316 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 DCDC2Q9UHG0 476 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 LNPEPQ9UIQ6 1025 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 ITGA11Q9UKX5 1188 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 SCN1AP35498 2009 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.59□□□□□ -0.23
USP42-203ENST00000426246 TRIM13O60858 407 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 CES1P23141 567 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 TAF6P49848 677 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 PDAP1Q13442 181 aaKnown RBP13.59□□□□□ -0.23
USP42-203ENST00000426246 AGKQ53H12 422 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 SEL1L3Q68CR1 1132 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 KRT80Q6KB66 452 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 CYP4V2Q6ZWL3 525 aaPredicted RBP13.59□□□□□ -0.23
USP42-203ENST00000426246 CHSY1Q86X52 802 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 B3GALNT2Q8NCR0 500 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 NXNL1Q96CM4 212 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 HBEGFQ99075 208 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 PAAF1Q9BRP4 392 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 UTP6Q9NYH9 597 aaKnown RBP13.59□□□□□ -0.23
USP42-203ENST00000426246 PCDHGB4Q9UN71 923 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 PCDHGB5Q9Y5G0 923 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 A0A088AWK7 358 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 SAC3D1A6NKF1 404 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 ADAMTS4O75173 837 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 FOLH1Q04609 750 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 KLF10Q13118 480 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 FSCBQ5H9T9 825 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 CLEC6AQ6EIG7 209 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 ALKAL1Q6UXT8 129 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 ZNF534Q76KX8 674 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 SLC35F5Q8WV83 523 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 ESAMQ96AP7 390 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 CENPKQ9BS16 269 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 VRTNQ9H8Y1 702 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 PLAC1Q9HBJ0 212 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 S100A14Q9HCY8 104 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 HNRNPCL1O60812 293 aaKnown RBP13.59□□□□□ -0.23
USP42-203ENST00000426246 ALDH1A1P00352 501 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 PRKCGP05129 697 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 FAM200BP0CF97 657 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 GRM5P41594 1212 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 ACTR3P61158 418 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 DBN1Q16643 649 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 C9orf57Q5W0N0 161 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 CCSAPQ6IQ19 270 aaPredicted RBP13.59□□□□□ -0.23
USP42-203ENST00000426246 ESRP1Q6NXG1 681 aaKnown RBP13.59□□□□□ -0.23
USP42-203ENST00000426246 NOTUMQ6P988 496 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 OR9I1Q8NGQ6 314 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 SCAMP5Q8TAC9 235 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 MPP4Q96JB8 637 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 ZNF670Q9BS34 389 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 DCUN1D5Q9BTE7 237 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 CFHR5Q9BXR6 569 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 AP5M1Q9H0R1 490 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 TRPC7Q9HCX4 862 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 THEGQ9P2T0 379 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 GMPR2Q9P2T1 348 aaKnown RBP13.59□□□□□ -0.23
USP42-203ENST00000426246 EGFL7Q9UHF1 273 aa13.59□□□□□ -0.23
USP42-203ENST00000426246 TRDMT1O14717 391 aaKnown RBP13.58□□□□□ -0.23
USP42-203ENST00000426246 MDM4O15151 490 aa13.58□□□□□ -0.23
USP42-203ENST00000426246 WFS1O76024 890 aa13.58□□□□□ -0.23
USP42-203ENST00000426246 PGAM1P18669 254 aa13.58□□□□□ -0.23
USP42-203ENST00000426246 THOP1P52888 689 aa13.58□□□□□ -0.23
USP42-203ENST00000426246 PTPRCAPQ14761 206 aa13.58□□□□□ -0.23
USP42-203ENST00000426246 MBLAC2Q68D91 279 aa13.58□□□□□ -0.23
USP42-203ENST00000426246 C7orf26Q96N11 449 aa13.58□□□□□ -0.23
USP42-203ENST00000426246 LRRC40Q9H9A6 602 aa13.58□□□□□ -0.23
USP42-203ENST00000426246 RNF186Q9NXI6 227 aa13.58□□□□□ -0.23
USP42-203ENST00000426246 EMCNQ9ULC0 261 aa13.58□□□□□ -0.23
USP42-203ENST00000426246 FRMPD3Q5JV73 1810 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 OR51F1A6NGY5 319 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 AURKAO14965 403 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 CLGNO14967 610 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 AKAP10O43572 662 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 PFDN1O60925 122 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 ZFXP17010 805 aaPredicted RBP13.58□□□□□ -0.24
USP42-203ENST00000426246 BRCC3P46736 316 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 GABRB2P47870 512 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 CDC42EP1Q00587 391 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 NOGQ13253 232 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 SNX17Q15036 470 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 PDK3Q15120 406 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 LSM12Q3MHD2 195 aaKnown RBP13.58□□□□□ -0.24
USP42-203ENST00000426246 ANKRD52Q8NB46 1076 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 WNT8BQ93098 351 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 TNIP3Q96KP6 325 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms