RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 IRAK1P51617 712 aa16.51■□□□□ 0.23
PUDP-203ENST00000424830 CLCN6P51797 869 aa16.51■□□□□ 0.23
PUDP-203ENST00000424830 CDH4P55283 916 aa16.51■□□□□ 0.23
PUDP-203ENST00000424830 NME3Q13232 169 aa16.51■□□□□ 0.23
PUDP-203ENST00000424830 ZNF542PQ5EBM4 170 aa16.51■□□□□ 0.23
PUDP-203ENST00000424830 EFHC1Q5JVL4 640 aa16.51■□□□□ 0.23
PUDP-203ENST00000424830 SEL1L3Q68CR1 1132 aa16.51■□□□□ 0.23
PUDP-203ENST00000424830 ZCCHC8Q6NZY4 707 aaKnown RBP16.51■□□□□ 0.23
PUDP-203ENST00000424830 ZNF548Q8NEK5 533 aaPredicted RBP16.51■□□□□ 0.23
PUDP-203ENST00000424830 OR2A12Q8NGT7 310 aa16.51■□□□□ 0.23
PUDP-203ENST00000424830 GRIN3AQ8TCU5 1115 aa16.51■□□□□ 0.23
PUDP-203ENST00000424830 SNRNP27Q8WVK2 155 aaKnown RBP16.51■□□□□ 0.23
PUDP-203ENST00000424830 ZNF606Q8WXB4 792 aa16.51■□□□□ 0.23
PUDP-203ENST00000424830 TTC9Q92623 222 aa16.51■□□□□ 0.23
PUDP-203ENST00000424830 ARRDC3Q96B67 414 aa16.51■□□□□ 0.23
PUDP-203ENST00000424830 DHTKD1Q96HY7 919 aaPredicted RBP16.51■□□□□ 0.23
PUDP-203ENST00000424830 SLC2A13Q96QE2 648 aa16.51■□□□□ 0.23
PUDP-203ENST00000424830 HDAC8Q9BY41 377 aa16.51■□□□□ 0.23
PUDP-203ENST00000424830 SEMA4CQ9C0C4 833 aa16.51■□□□□ 0.23
PUDP-203ENST00000424830 CLMPQ9H6B4 373 aa16.51■□□□□ 0.23
PUDP-203ENST00000424830 ASNSD1Q9NWL6 643 aa16.51■□□□□ 0.23
PUDP-203ENST00000424830 HS3ST4Q9Y661 456 aa16.51■□□□□ 0.23
PUDP-203ENST00000424830 U3KQA8 63 aa16.51■□□□□ 0.23
PUDP-203ENST00000424830 MT-CO1P00395 513 aa16.5■□□□□ 0.23
PUDP-203ENST00000424830 RHOCP08134 193 aa16.5■□□□□ 0.23
PUDP-203ENST00000424830 NME1P15531 152 aaKnown RBP16.5■□□□□ 0.23
PUDP-203ENST00000424830 CDKN3Q16667 212 aa16.5■□□□□ 0.23
PUDP-203ENST00000424830 TMEM259Q4ZIN3 620 aa16.5■□□□□ 0.23
PUDP-203ENST00000424830 OR6B2Q6IFH4 312 aa16.5■□□□□ 0.23
PUDP-203ENST00000424830 KYAT3Q6YP21 454 aaKnown RBP16.5■□□□□ 0.23
PUDP-203ENST00000424830 PARGQ86W56 976 aa16.5■□□□□ 0.23
PUDP-203ENST00000424830 MED8Q96G25 268 aa16.5■□□□□ 0.23
PUDP-203ENST00000424830 IL36AQ9UHA7 158 aa16.5■□□□□ 0.23
PUDP-203ENST00000424830 HOOK1Q9UJC3 728 aaKnown RBP16.5■□□□□ 0.23
PUDP-203ENST00000424830 ZFR2Q9UPR6 939 aaKnown RBP16.5■□□□□ 0.23
PUDP-203ENST00000424830 HS3ST3A1Q9Y663 406 aa16.5■□□□□ 0.23
PUDP-203ENST00000424830 CPED1A4D0V7 1026 aa16.49■□□□□ 0.23
PUDP-203ENST00000424830 SNAP91O60641 907 aa16.49■□□□□ 0.23
PUDP-203ENST00000424830 PAGE1O75459 146 aa16.49■□□□□ 0.23
PUDP-203ENST00000424830 CSF2P04141 144 aa16.49■□□□□ 0.23
PUDP-203ENST00000424830 TGM2P21980 687 aa16.49■□□□□ 0.23
PUDP-203ENST00000424830 RRM1P23921 792 aa16.49■□□□□ 0.23
PUDP-203ENST00000424830 GGCXP38435 758 aa16.49■□□□□ 0.23
PUDP-203ENST00000424830 PPP1R2P41236 205 aa16.49■□□□□ 0.23
PUDP-203ENST00000424830 RPS21P63220 83 aaKnown RBP16.49■□□□□ 0.23
PUDP-203ENST00000424830 KIAA1161Q6NSJ0 714 aa16.49■□□□□ 0.23
PUDP-203ENST00000424830 RBM44Q6ZP01 1051 aaKnown RBP16.49■□□□□ 0.23
PUDP-203ENST00000424830 ENOSF1Q7L5Y1 443 aa16.49■□□□□ 0.23
PUDP-203ENST00000424830 FMR1NBQ8N0W7 255 aaPredicted RBP16.49■□□□□ 0.23
PUDP-203ENST00000424830 TPCN2Q8NHX9 752 aa16.49■□□□□ 0.23
PUDP-203ENST00000424830 SPATA20Q8TB22 786 aa16.49■□□□□ 0.23
PUDP-203ENST00000424830 ATXN7L3BQ96GX2 97 aa16.49■□□□□ 0.23
PUDP-203ENST00000424830 SLC46A1Q96NT5 459 aa16.49■□□□□ 0.23
PUDP-203ENST00000424830 SLC17A9Q9BYT1 436 aa16.49■□□□□ 0.23
PUDP-203ENST00000424830 INTS2Q9H0H0 1204 aaKnown RBP16.49■□□□□ 0.23
PUDP-203ENST00000424830 SIK2Q9H0K1 926 aa16.49■□□□□ 0.23
PUDP-203ENST00000424830 GDPD2Q9HCC8 539 aa16.49■□□□□ 0.23
PUDP-203ENST00000424830 UBE2TQ9NPD8 197 aaPredicted RBP16.49■□□□□ 0.23
PUDP-203ENST00000424830 GPR27Q9NS67 375 aa16.49■□□□□ 0.23
PUDP-203ENST00000424830 IPO11Q9UI26 975 aaKnown RBP16.49■□□□□ 0.23
PUDP-203ENST00000424830 VPS51Q9UID3 782 aa16.49■□□□□ 0.23
PUDP-203ENST00000424830 PCDHGA8Q9Y5G5 932 aa16.49■□□□□ 0.23
PUDP-203ENST00000424830 CSNK1G3Q9Y6M4 447 aa16.49■□□□□ 0.23
PUDP-203ENST00000424830 SPTY2D1-AS1A0A0U1RR47 76 aa16.48■□□□□ 0.23
PUDP-203ENST00000424830 GOLGA6L3A6NEY3 463 aa16.48■□□□□ 0.23
PUDP-203ENST00000424830 K7ERQ8 282 aa16.48■□□□□ 0.23
PUDP-203ENST00000424830 GRAP2O75791 330 aa16.48■□□□□ 0.23
PUDP-203ENST00000424830 RABIFP47224 123 aa16.48■□□□□ 0.23
PUDP-203ENST00000424830 NEK3P51956 506 aa16.48■□□□□ 0.23
PUDP-203ENST00000424830 KCNC4Q03721 635 aa16.48■□□□□ 0.23
PUDP-203ENST00000424830 FZD2Q14332 565 aa16.48■□□□□ 0.23
PUDP-203ENST00000424830 C5orf22Q49AR2 442 aa16.48■□□□□ 0.23
PUDP-203ENST00000424830 ARSIQ5FYB1 569 aa16.48■□□□□ 0.23
PUDP-203ENST00000424830 C22orf39Q6P5X5 142 aa16.48■□□□□ 0.23
PUDP-203ENST00000424830 EFL1Q7Z2Z2 1120 aaKnown RBP16.48■□□□□ 0.23
PUDP-203ENST00000424830 SETD3Q86TU7 594 aaPredicted RBP16.48■□□□□ 0.23
PUDP-203ENST00000424830 ARL14Q8N4G2 192 aa16.48■□□□□ 0.23
PUDP-203ENST00000424830 DCAF4L2Q8NA75 395 aa16.48■□□□□ 0.23
PUDP-203ENST00000424830 CHST14Q8NCH0 376 aa16.48■□□□□ 0.23
PUDP-203ENST00000424830 PPP1R13BQ96KQ4 1090 aa16.48■□□□□ 0.23
PUDP-203ENST00000424830 CPXM1Q96SM3 734 aa16.48■□□□□ 0.23
PUDP-203ENST00000424830 PSMB7Q99436 277 aa16.48■□□□□ 0.23
PUDP-203ENST00000424830 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.48■□□□□ 0.23
PUDP-203ENST00000424830 CAAP1Q9H8G2 361 aa16.48■□□□□ 0.23
PUDP-203ENST00000424830 BOD1L1Q8NFC6 3051 aa16.48■□□□□ 0.23
PUDP-203ENST00000424830 GOLGA6L4A6NEF3 574 aa16.47■□□□□ 0.23
PUDP-203ENST00000424830 K7ENP7 123 aa16.47■□□□□ 0.23
PUDP-203ENST00000424830 AQP9O43315 295 aa16.47■□□□□ 0.23
PUDP-203ENST00000424830 SMAD6O43541 496 aaKnown RBP16.47■□□□□ 0.23
PUDP-203ENST00000424830 SLC28A2O43868 658 aa16.47■□□□□ 0.23
PUDP-203ENST00000424830 LEFTY1O75610 366 aa16.47■□□□□ 0.23
PUDP-203ENST00000424830 TCEA3O75764 348 aa16.47■□□□□ 0.23
PUDP-203ENST00000424830 CNTN5O94779 1100 aa16.47■□□□□ 0.23
PUDP-203ENST00000424830 GNA14O95837 355 aa16.47■□□□□ 0.23
PUDP-203ENST00000424830 AFPP02771 609 aaKnown RBP16.47■□□□□ 0.23
PUDP-203ENST00000424830 SNX16P57768 344 aa16.47■□□□□ 0.23
PUDP-203ENST00000424830 PDE1CQ14123 709 aaPredicted RBP16.47■□□□□ 0.23
PUDP-203ENST00000424830 KLHL10Q6JEL2 608 aa16.47■□□□□ 0.23
PUDP-203ENST00000424830 GUSBP11Q6P575 273 aa16.47■□□□□ 0.23
PUDP-203ENST00000424830 INO80CQ6PI98 192 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms