RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 LDB2O43679 373 aa4.31□□□□□ -1.72
LINC00397-201ENST00000422074 PCYT1AP49585 367 aa4.31□□□□□ -1.72
LINC00397-201ENST00000422074 CLCNKBP51801 687 aa4.31□□□□□ -1.72
LINC00397-201ENST00000422074 TRAF2Q12933 501 aa4.31□□□□□ -1.72
LINC00397-201ENST00000422074 HNF4GQ14541 408 aa4.31□□□□□ -1.72
LINC00397-201ENST00000422074 CCDC38Q502W7 563 aa4.31□□□□□ -1.72
LINC00397-201ENST00000422074 LRRC24Q50LG9 513 aa4.31□□□□□ -1.72
LINC00397-201ENST00000422074 FSCBQ5H9T9 825 aa4.31□□□□□ -1.72
LINC00397-201ENST00000422074 TMEM268Q5VZI3 342 aa4.31□□□□□ -1.72
LINC00397-201ENST00000422074 NADSYN1Q6IA69 706 aa4.31□□□□□ -1.72
LINC00397-201ENST00000422074 RRAGAQ7L523 313 aa4.31□□□□□ -1.72
LINC00397-201ENST00000422074 SERPINA11Q86U17 422 aa4.31□□□□□ -1.72
LINC00397-201ENST00000422074 WDR5BQ86VZ2 330 aa4.31□□□□□ -1.72
LINC00397-201ENST00000422074 BRSK2Q8IWQ3 736 aa4.31□□□□□ -1.72
LINC00397-201ENST00000422074 CEP76Q8TAP6 659 aa4.31□□□□□ -1.72
LINC00397-201ENST00000422074 SLC35F5Q8WV83 523 aa4.31□□□□□ -1.72
LINC00397-201ENST00000422074 CLPBQ9H078 707 aa4.31□□□□□ -1.72
LINC00397-201ENST00000422074 PLEKHA2Q9HB19 425 aa4.31□□□□□ -1.72
LINC00397-201ENST00000422074 THAP1Q9NVV9 213 aa4.31□□□□□ -1.72
LINC00397-201ENST00000422074 GRHL1Q9NZI5 618 aa4.31□□□□□ -1.72
LINC00397-201ENST00000422074 GRHPRQ9UBQ7 328 aa4.31□□□□□ -1.72
LINC00397-201ENST00000422074 UPB1Q9UBR1 384 aa4.31□□□□□ -1.72
LINC00397-201ENST00000422074 PLEKHB1Q9UF11 243 aaPredicted RBP4.31□□□□□ -1.72
LINC00397-201ENST00000422074 PROCRQ9UNN8 238 aa4.31□□□□□ -1.72
LINC00397-201ENST00000422074 ICKQ9UPZ9 632 aa4.31□□□□□ -1.72
LINC00397-201ENST00000422074 F5H423 210 aaPredicted RBP4.3□□□□□ -1.72
LINC00397-201ENST00000422074 IPO5O00410 1097 aaKnown RBP4.3□□□□□ -1.72
LINC00397-201ENST00000422074 KIF1CO43896 1103 aaKnown RBP4.3□□□□□ -1.72
LINC00397-201ENST00000422074 METTL18O95568 372 aa4.3□□□□□ -1.72
LINC00397-201ENST00000422074 PPP1R3DO95685 299 aa4.3□□□□□ -1.72
LINC00397-201ENST00000422074 MMP3P08254 477 aa4.3□□□□□ -1.72
LINC00397-201ENST00000422074 GJC1P36383 396 aa4.3□□□□□ -1.72
LINC00397-201ENST00000422074 KIF5AQ12840 1032 aa4.3□□□□□ -1.72
LINC00397-201ENST00000422074 ZNF284Q2VY69 593 aa4.3□□□□□ -1.72
LINC00397-201ENST00000422074 JMJD6Q6NYC1 403 aaPredicted RBP4.3□□□□□ -1.72
LINC00397-201ENST00000422074 SYT13Q7L8C5 426 aa4.3□□□□□ -1.72
LINC00397-201ENST00000422074 TMC8Q8IU68 726 aa4.3□□□□□ -1.72
LINC00397-201ENST00000422074 RBFAQ8N0V3 343 aa4.3□□□□□ -1.72
LINC00397-201ENST00000422074 SCAIQ8N9R8 606 aa4.3□□□□□ -1.72
LINC00397-201ENST00000422074 SPATA3Q8NHX4 192 aa4.3□□□□□ -1.72
LINC00397-201ENST00000422074 APOLD1Q96LR9 279 aa4.3□□□□□ -1.72
LINC00397-201ENST00000422074 HERC2P3Q9BVR0 1158 aa4.3□□□□□ -1.72
LINC00397-201ENST00000422074 IFT27Q9BW83 186 aa4.3□□□□□ -1.72
LINC00397-201ENST00000422074 TAGLN3Q9UI15 199 aa4.3□□□□□ -1.72
LINC00397-201ENST00000422074 DAAM1Q9Y4D1 1078 aa4.3□□□□□ -1.72
LINC00397-201ENST00000422074 SYN3O14994 580 aa4.29□□□□□ -1.72
LINC00397-201ENST00000422074 LIASO43766 372 aa4.29□□□□□ -1.72
LINC00397-201ENST00000422074 CSF1P09603 554 aa4.29□□□□□ -1.72
LINC00397-201ENST00000422074 MTNR1AP48039 350 aa4.29□□□□□ -1.72
LINC00397-201ENST00000422074 AMTP48728 403 aa4.29□□□□□ -1.72
LINC00397-201ENST00000422074 CDH12P55289 794 aa4.29□□□□□ -1.72
LINC00397-201ENST00000422074 SEC61A1P61619 476 aaKnown RBP4.29□□□□□ -1.72
LINC00397-201ENST00000422074 NFATC4Q14934 902 aa4.29□□□□□ -1.72
LINC00397-201ENST00000422074 NCAPH2Q6IBW4 605 aa4.29□□□□□ -1.72
LINC00397-201ENST00000422074 THAP4Q8WY91 577 aa4.29□□□□□ -1.72
LINC00397-201ENST00000422074 TM6SF1Q9BZW5 370 aa4.29□□□□□ -1.72
LINC00397-201ENST00000422074 TAF1DQ9H5J8 278 aaPredicted RBP4.29□□□□□ -1.72
LINC00397-201ENST00000422074 SAYSD1Q9NPB0 183 aa4.29□□□□□ -1.72
LINC00397-201ENST00000422074 CDH22Q9UJ99 828 aa4.29□□□□□ -1.72
LINC00397-201ENST00000422074 CLDN16Q9Y5I7 305 aa4.29□□□□□ -1.72
LINC00397-201ENST00000422074 A0A1B0GUV1 79 aa4.28□□□□□ -1.72
LINC00397-201ENST00000422074 OR6C68A6NDL8 312 aa4.28□□□□□ -1.72
LINC00397-201ENST00000422074 HMX3A6NHT5 357 aa4.28□□□□□ -1.72
LINC00397-201ENST00000422074 CLDN7O95471 211 aa4.28□□□□□ -1.72
LINC00397-201ENST00000422074 TNNT1P13805 278 aa4.28□□□□□ -1.72
LINC00397-201ENST00000422074 ZNF12P17014 697 aa4.28□□□□□ -1.72
LINC00397-201ENST00000422074 THPOP40225 353 aa4.28□□□□□ -1.72
LINC00397-201ENST00000422074 DPP6P42658 865 aa4.28□□□□□ -1.72
LINC00397-201ENST00000422074 PRKAA2P54646 552 aa4.28□□□□□ -1.72
LINC00397-201ENST00000422074 PDCLQ13371 301 aa4.28□□□□□ -1.72
LINC00397-201ENST00000422074 BRD3Q15059 726 aa4.28□□□□□ -1.72
LINC00397-201ENST00000422074 TUBB8Q3ZCM7 444 aa4.28□□□□□ -1.72
LINC00397-201ENST00000422074 NEXN-AS1Q8NBZ9 246 aa4.28□□□□□ -1.72
LINC00397-201ENST00000422074 OR4N2Q8NGD1 307 aa4.28□□□□□ -1.72
LINC00397-201ENST00000422074 FAM216AQ8WUB2 273 aa4.28□□□□□ -1.72
LINC00397-201ENST00000422074 CDT1Q9H211 546 aa4.28□□□□□ -1.72
LINC00397-201ENST00000422074 CD207Q9UJ71 328 aa4.28□□□□□ -1.72
LINC00397-201ENST00000422074 ZNF112Q9UJU3 913 aa4.28□□□□□ -1.72
LINC00397-201ENST00000422074 SLC45A1Q9Y2W3 748 aa4.28□□□□□ -1.72
LINC00397-201ENST00000422074 SRPRBQ9Y5M8 271 aaKnown RBP4.28□□□□□ -1.72
LINC00397-201ENST00000422074 IGHV4-28A0A0C4DH34 117 aa4.27□□□□□ -1.73
LINC00397-201ENST00000422074 ASAP2O43150 1006 aa4.27□□□□□ -1.73
LINC00397-201ENST00000422074 PAPSS2O95340 614 aaPredicted RBP4.27□□□□□ -1.73
LINC00397-201ENST00000422074 TK1P04183 234 aa4.27□□□□□ -1.73
LINC00397-201ENST00000422074 PRSS2P07478 247 aa4.27□□□□□ -1.73
LINC00397-201ENST00000422074 NAGAP17050 411 aa4.27□□□□□ -1.73
LINC00397-201ENST00000422074 MT3P25713 68 aa4.27□□□□□ -1.73
LINC00397-201ENST00000422074 ADD2P35612 726 aa4.27□□□□□ -1.73
LINC00397-201ENST00000422074 SKIV2L2P42285 1042 aaKnown RBP4.27□□□□□ -1.73
LINC00397-201ENST00000422074 RBM5P52756 815 aaKnown RBP eCLIP4.27□□□□□ -1.73
LINC00397-201ENST00000422074 ART1P52961 327 aa4.27□□□□□ -1.73
LINC00397-201ENST00000422074 NUDT6P53370 316 aa4.27□□□□□ -1.73
LINC00397-201ENST00000422074 TMPRSS3P57727 454 aa4.27□□□□□ -1.73
LINC00397-201ENST00000422074 ADORA2A-AS1P86434 159 aa4.27□□□□□ -1.73
LINC00397-201ENST00000422074 CHAF1AQ13111 956 aaPredicted RBP4.27□□□□□ -1.73
LINC00397-201ENST00000422074 BYSLQ13895 437 aaKnown RBP4.27□□□□□ -1.73
LINC00397-201ENST00000422074 RPE65Q16518 533 aa4.27□□□□□ -1.73
LINC00397-201ENST00000422074 ZNF484Q5JVG2 852 aa4.27□□□□□ -1.73
LINC00397-201ENST00000422074 PATL1Q86TB9 770 aaKnown RBP4.27□□□□□ -1.73
LINC00397-201ENST00000422074 GALNT15Q8N3T1 639 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms